RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 COX8AP10176 69 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 TPT1P13693 172 aaKnown RBP-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 COX7BP24311 80 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 S100A5P33763 92 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 ARPC4P59998 168 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 ELOF1P60002 83 aaKnown RBP-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 HBBP68871 147 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 LIN52Q52LA3 116 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 TMEM128Q5BJH2 165 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 LINC00305Q7Z4B0 112 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 COX7B2Q8TF08 81 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 C1orf54Q8WWF1 131 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 AP1S3Q96PC3 154 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 GPX7Q96SL4 187 aaPredicted RBP-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 TRGV9Q99603 122 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 RERGLQ9H628 205 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 CACFD1Q9UGQ2 172 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 CDKN2A-AS1Q9UH64 79 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 ERG28Q9UKR5 140 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 HIGD1AQ9Y241 93 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 TPRKBQ9Y3C4 175 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 V9GYS6 101 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 C3orf85A0A1B0GTC6 90 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 A0A1B0GX51 115 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 SMIM27A0A1W2PRY6 76 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 ATP5HO75947 161 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 NDUFC2O95298 119 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 IGLC2P0DOY2 106 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 FABP2P12104 132 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 HIST1H1DP16402 221 aaKnown RBP-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 UBE2L3P68036 154 aaKnown RBP-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 CATR1Q13166 79 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 SPA17Q15506 151 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 SCGB2B2Q4G0G5 96 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 CTAGE3PQ8IX95 158 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 S100A13Q99584 98 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 PRR15LQ9BU68 103 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 C9orf16Q9BUW7 83 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 NMES1Q9C002 83 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 BATF3Q9NR55 127 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 SPANXA1Q9NS26 97 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 TAS2R8Q9NYW2 309 aa-0.54□□□□□ -2.5
UBXN4-207ENST00000471246 BBIP1A8MTZ0 92 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 MIF4GDA9UHW6 222 aaKnown RBP-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 H3BQ15 152 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 H3BVH4 76 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 EDF1O60869 148 aaKnown RBP-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 CTXN2P0C2S0 81 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 SPINK8P0C7L1 97 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 S100A3P33764 101 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 UBE2G1P62253 170 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 GNG5P63218 68 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 PIGYQ3MUY2 71 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 SPANXN1Q5VSR9 72 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 C10orf113Q5VZT2 155 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 MRPL54Q6P161 138 aaKnown RBP-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 PRELID3AQ96N28 172 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 PFDN5Q99471 154 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 PAIP2Q9BPZ3 127 aaKnown RBP-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 C2orf88Q9BSF0 95 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 PDCD10Q9BUL8 212 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 TMEM191AQ9H0A3 160 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 BIN3Q9NQY0 253 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 MED31Q9Y3C7 131 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 SERP1Q9Y6X1 66 aa-0.55□□□□□ -2.5
UBXN4-207ENST00000471246 A6NIN4 97 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 SYS1-DBNDD2H3BUS1 97 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 H3BUT2 72 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 TRACP01848 142 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 NBEAP1P0C6P0 100 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 FABP4P15090 132 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 FCER1GP30273 86 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 SMCO1Q147U7 214 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 CLLU1Q5K131 121 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 NCBP2-AS2Q69YL0 99 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 PPP1R2P3Q6NXS1 205 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 BAGE2Q86Y30 109 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 SERP2Q8N6R1 65 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 LZICQ8WZA0 190 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 C12orf57Q99622 126 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 MGST2Q99735 147 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 VPS25Q9BRG1 176 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 ATG5Q9H1Y0 275 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 ST20Q9HBF5 79 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 ARL2BPQ9Y2Y0 163 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 AP4S1Q9Y587 144 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 IER3IP1Q9Y5U9 82 aa-0.56□□□□□ -2.5
UBXN4-207ENST00000471246 RIIAD1A6NNX1 92 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 F6UZH7 168 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 H3BMG7 143 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 SNCGO76070 127 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 IFI27P40305 119 aaPredicted RBP-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 MRPS25P82663 173 aaKnown RBP-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 SSBP1Q04837 148 aaKnown RBP-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 MEIG1Q5JSS6 88 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 TMEM244Q5VVB8 128 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 RPL13AP3Q6NVV1 102 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 TMEM91Q6ZNR0 172 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 BAGE3Q86Y29 109 aa-0.57□□□□□ -2.5
UBXN4-207ENST00000471246 STX12Q86Y82 276 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms