RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 Q8N9L7 120 aa4.87□□□□□ -1.63
FDPS-209ENST00000471117 TYMSOSQ8TAI1 123 aa4.87□□□□□ -1.63
FDPS-209ENST00000471117 LPAP08519 4548 aa4.86□□□□□ -1.63
FDPS-209ENST00000471117 IGKV4-1P06312 121 aa4.86□□□□□ -1.63
FDPS-209ENST00000471117 DSCR10P59022 87 aa4.86□□□□□ -1.63
FDPS-209ENST00000471117 CD164Q04900 197 aa4.86□□□□□ -1.63
FDPS-209ENST00000471117 LINC00472Q9H8W2 130 aa4.86□□□□□ -1.63
FDPS-209ENST00000471117 SS18L2Q9UHA2 77 aa4.86□□□□□ -1.63
FDPS-209ENST00000471117 ANAPC13Q9BS18 74 aa4.84□□□□□ -1.63
FDPS-209ENST00000471117 K7EQZ3 153 aa4.83□□□□□ -1.64
FDPS-209ENST00000471117 ATOX1O00244 68 aa4.83□□□□□ -1.64
FDPS-209ENST00000471117 C4orf48Q5BLP8 95 aa4.83□□□□□ -1.64
FDPS-209ENST00000471117 Q96NJ1 140 aa4.83□□□□□ -1.64
FDPS-209ENST00000471117 J3KT08 172 aa4.82□□□□□ -1.64
FDPS-209ENST00000471117 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
FDPS-209ENST00000471117 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
FDPS-209ENST00000471117 A8MWP4 228 aa4.8□□□□□ -1.64
FDPS-209ENST00000471117 SPAG11AQ6PDA7 123 aa4.8□□□□□ -1.64
FDPS-209ENST00000471117 PRR15Q8IV56 129 aa4.8□□□□□ -1.64
FDPS-209ENST00000471117 SPINK1P00995 79 aa4.79□□□□□ -1.64
FDPS-209ENST00000471117 KRTAP10-8P60410 259 aa4.79□□□□□ -1.64
FDPS-209ENST00000471117 ASB16-AS1Q495Z4 193 aa4.79□□□□□ -1.64
FDPS-209ENST00000471117 NDUFB1O75438 58 aa4.78□□□□□ -1.64
FDPS-209ENST00000471117 Q5XG85 94 aa4.78□□□□□ -1.64
FDPS-209ENST00000471117 HCG22E2RYF7 251 aa4.77□□□□□ -1.65
FDPS-209ENST00000471117 SERP2Q8N6R1 65 aa4.77□□□□□ -1.65
FDPS-209ENST00000471117 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
FDPS-209ENST00000471117 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
FDPS-209ENST00000471117 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
FDPS-209ENST00000471117 C1orf195Q5TG92 126 aa4.76□□□□□ -1.65
FDPS-209ENST00000471117 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
FDPS-209ENST00000471117 TRAV7A0A075B6U4 112 aa4.75□□□□□ -1.65
FDPS-209ENST00000471117 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
FDPS-209ENST00000471117 COX7CP15954 63 aa4.75□□□□□ -1.65
FDPS-209ENST00000471117 SMIM20Q8N5G0 67 aa4.75□□□□□ -1.65
FDPS-209ENST00000471117 IGHV6-1A0A0B4J1U7 121 aa4.74□□□□□ -1.65
FDPS-209ENST00000471117 MMP24-AS1A0A0U1RRL7 71 aa4.74□□□□□ -1.65
FDPS-209ENST00000471117 UQCRQO14949 82 aa4.74□□□□□ -1.65
FDPS-209ENST00000471117 CASC2Q6XLA1 102 aa4.74□□□□□ -1.65
FDPS-209ENST00000471117 C8orf17Q9NRJ1 99 aa4.73□□□□□ -1.65
FDPS-209ENST00000471117 OCR1Q9BZK8 76 aa4.72□□□□□ -1.65
FDPS-209ENST00000471117 hDV103S1A0JD37 113 aa4.71□□□□□ -1.66
FDPS-209ENST00000471117 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.66
FDPS-209ENST00000471117 C8orf87E5RJ46 101 aa4.69□□□□□ -1.66
FDPS-209ENST00000471117 TMEM254Q8TBM7 123 aa4.68□□□□□ -1.66
FDPS-209ENST00000471117 LINC00313P59037 77 aa4.67□□□□□ -1.66
FDPS-209ENST00000471117 C20orf197Q8N268 126 aa4.67□□□□□ -1.66
FDPS-209ENST00000471117 MRPL34Q9BQ48 92 aaKnown RBP4.67□□□□□ -1.66
FDPS-209ENST00000471117 RETNLBQ9BQ08 111 aa4.66□□□□□ -1.66
FDPS-209ENST00000471117 NDUFS5O43920 106 aa4.64□□□□□ -1.67
FDPS-209ENST00000471117 C5orf47Q569G3 176 aa4.64□□□□□ -1.67
FDPS-209ENST00000471117 FP248Q71RG6 208 aaPredicted RBP4.64□□□□□ -1.67
FDPS-209ENST00000471117 CYSTM1Q9H1C7 97 aa4.64□□□□□ -1.67
FDPS-209ENST00000471117 SNURFQ9Y675 71 aa4.64□□□□□ -1.67
FDPS-209ENST00000471117 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
FDPS-209ENST00000471117 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
FDPS-209ENST00000471117 KLKP1Q107X0 134 aa4.62□□□□□ -1.67
FDPS-209ENST00000471117 H0Y9P7 68 aa4.61□□□□□ -1.67
FDPS-209ENST00000471117 MP68P56378 58 aa4.61□□□□□ -1.67
FDPS-209ENST00000471117 IGLV7-46A0A075B6I9 117 aa4.6□□□□□ -1.67
FDPS-209ENST00000471117 PRR4Q16378 134 aa4.6□□□□□ -1.67
FDPS-209ENST00000471117 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
FDPS-209ENST00000471117 TRAV22A0A0B4J277 110 aa4.59□□□□□ -1.67
FDPS-209ENST00000471117 ZCCHC13Q8WW36 166 aaKnown RBP4.59□□□□□ -1.67
FDPS-209ENST00000471117 LINC00208Q96KT6 92 aa4.59□□□□□ -1.67
FDPS-209ENST00000471117 H3BPC8 53 aa4.58□□□□□ -1.68
FDPS-209ENST00000471117 H7BZZ5 65 aa4.58□□□□□ -1.68
FDPS-209ENST00000471117 C9orf92A6NGG3 77 aa4.57□□□□□ -1.68
FDPS-209ENST00000471117 NDUFC1O43677 76 aa4.57□□□□□ -1.68
FDPS-209ENST00000471117 Q5W150 140 aa4.57□□□□□ -1.68
FDPS-209ENST00000471117 C1orf64Q8NEQ6 169 aa4.57□□□□□ -1.68
FDPS-209ENST00000471117 TMEM258P61165 79 aa4.55□□□□□ -1.68
FDPS-209ENST00000471117 KRTAP13-3Q3SY46 172 aa4.55□□□□□ -1.68
FDPS-209ENST00000471117 A8MUU9 505 aa4.52□□□□□ -1.69
FDPS-209ENST00000471117 TPRXLQ17RH7 258 aa4.52□□□□□ -1.69
FDPS-209ENST00000471117 C20orf166-AS1Q96NR2 134 aa4.52□□□□□ -1.69
FDPS-209ENST00000471117 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
FDPS-209ENST00000471117 LOC101927531A0A1B0GV80 90 aa4.51□□□□□ -1.69
FDPS-209ENST00000471117 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
FDPS-209ENST00000471117 PCOTHQ58A44 107 aa4.5□□□□□ -1.69
FDPS-209ENST00000471117 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
FDPS-209ENST00000471117 ATP5EP56381 51 aaPredicted RBP4.48□□□□□ -1.69
FDPS-209ENST00000471117 XP32Q5T750 250 aa4.48□□□□□ -1.69
FDPS-209ENST00000471117 Q75L30 129 aa4.48□□□□□ -1.69
FDPS-209ENST00000471117 CYP4F30PQ9H0H9 118 aa4.48□□□□□ -1.69
FDPS-209ENST00000471117 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.7
FDPS-209ENST00000471117 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
FDPS-209ENST00000471117 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
FDPS-209ENST00000471117 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
FDPS-209ENST00000471117 ATP11AUNQ6ZP68 121 aa4.43□□□□□ -1.7
FDPS-209ENST00000471117 HRES1P13985 223 aa4.42□□□□□ -1.7
FDPS-209ENST00000471117 RPS28P62857 69 aaKnown RBP4.42□□□□□ -1.7
FDPS-209ENST00000471117 C7orf65Q6ZTY9 151 aa4.42□□□□□ -1.7
FDPS-209ENST00000471117 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
FDPS-209ENST00000471117 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
FDPS-209ENST00000471117 MUC17Q685J3 4493 aa4.4□□□□□ -1.71
FDPS-209ENST00000471117 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
FDPS-209ENST00000471117 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
FDPS-209ENST00000471117 SPINK7P58062 85 aa4.38□□□□□ -1.71
FDPS-209ENST00000471117 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms