RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
CCM2-204ENST00000470837 K7EQZ3 153 aa5.52□□□□□ -1.53
CCM2-204ENST00000470837 Q8N9L7 120 aa5.52□□□□□ -1.53
CCM2-204ENST00000470837 LRP1Q07954 4544 aaKnown RBP5.51□□□□□ -1.53
CCM2-204ENST00000470837 C8orf87E5RJ46 101 aa5.51□□□□□ -1.53
CCM2-204ENST00000470837 MYCBP2O75592 4640 aa5.51□□□□□ -1.53
CCM2-204ENST00000470837 PRR4Q16378 134 aa5.5□□□□□ -1.53
CCM2-204ENST00000470837 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
CCM2-204ENST00000470837 FAT3Q8TDW7 4589 aa5.49□□□□□ -1.53
CCM2-204ENST00000470837 IGLV7-46A0A075B6I9 117 aa5.48□□□□□ -1.53
CCM2-204ENST00000470837 HCG22E2RYF7 251 aa5.48□□□□□ -1.53
CCM2-204ENST00000470837 LINC00313P59037 77 aa5.48□□□□□ -1.53
CCM2-204ENST00000470837 A0A087WVE0 104 aa5.47□□□□□ -1.53
CCM2-204ENST00000470837 SCGB1A1P11684 91 aa5.47□□□□□ -1.53
CCM2-204ENST00000470837 CASC2Q6XLA1 102 aa5.47□□□□□ -1.53
CCM2-204ENST00000470837 C8orf17Q9NRJ1 99 aa5.47□□□□□ -1.53
CCM2-204ENST00000470837 ABCA13Q86UQ4 5058 aa5.47□□□□□ -1.53
CCM2-204ENST00000470837 hDV103S1A0JD37 113 aa5.46□□□□□ -1.54
CCM2-204ENST00000470837 WFDC13Q8IUB5 93 aa5.46□□□□□ -1.54
CCM2-204ENST00000470837 MMP24-AS1A0A0U1RRL7 71 aa5.44□□□□□ -1.54
CCM2-204ENST00000470837 FAM236AA0A1B0GUQ0 79 aa5.43□□□□□ -1.54
CCM2-204ENST00000470837 FAM236BA0A1B0GV22 79 aa5.43□□□□□ -1.54
CCM2-204ENST00000470837 C9orf92A6NGG3 77 aa5.43□□□□□ -1.54
CCM2-204ENST00000470837 NDUFS5O43920 106 aa5.43□□□□□ -1.54
CCM2-204ENST00000470837 TNXBP22105 4242 aa5.43□□□□□ -1.54
CCM2-204ENST00000470837 LCE2BO14633 110 aa5.42□□□□□ -1.54
CCM2-204ENST00000470837 TMEM254Q8TBM7 123 aa5.42□□□□□ -1.54
CCM2-204ENST00000470837 MRPL34Q9BQ48 92 aaKnown RBP5.41□□□□□ -1.54
CCM2-204ENST00000470837 PCLOQ9Y6V0 5065 aa5.4□□□□□ -1.54
CCM2-204ENST00000470837 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.54
CCM2-204ENST00000470837 ATOX1O00244 68 aa5.39□□□□□ -1.55
CCM2-204ENST00000470837 SMIM20Q8N5G0 67 aa5.39□□□□□ -1.55
CCM2-204ENST00000470837 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
CCM2-204ENST00000470837 KRTAP13-3Q3SY46 172 aa5.37□□□□□ -1.55
CCM2-204ENST00000470837 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
CCM2-204ENST00000470837 KRTAP16-1A8MUX0 517 aa5.34□□□□□ -1.55
CCM2-204ENST00000470837 UQCRQO14949 82 aa5.34□□□□□ -1.55
CCM2-204ENST00000470837 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
CCM2-204ENST00000470837 ANAPC13Q9BS18 74 aa5.33□□□□□ -1.56
CCM2-204ENST00000470837 TRAV7A0A075B6U4 112 aa5.32□□□□□ -1.56
CCM2-204ENST00000470837 ATP11AUNQ6ZP68 121 aa5.32□□□□□ -1.56
CCM2-204ENST00000470837 Q75L30 129 aa5.32□□□□□ -1.56
CCM2-204ENST00000470837 C20orf166-AS1Q96NR2 134 aa5.32□□□□□ -1.56
CCM2-204ENST00000470837 A8MUU9 505 aa5.31□□□□□ -1.56
CCM2-204ENST00000470837 XP32Q5T750 250 aa5.31□□□□□ -1.56
CCM2-204ENST00000470837 MP68P56378 58 aa5.3□□□□□ -1.56
CCM2-204ENST00000470837 SERP2Q8N6R1 65 aa5.3□□□□□ -1.56
CCM2-204ENST00000470837 OCR1Q9BZK8 76 aa5.3□□□□□ -1.56
CCM2-204ENST00000470837 TRAV22A0A0B4J277 110 aa5.29□□□□□ -1.56
CCM2-204ENST00000470837 RPL37P61927 97 aaKnown RBP5.29□□□□□ -1.56
CCM2-204ENST00000470837 C5orf47Q569G3 176 aa5.29□□□□□ -1.56
CCM2-204ENST00000470837 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
CCM2-204ENST00000470837 H0Y9P7 68 aa5.27□□□□□ -1.57
CCM2-204ENST00000470837 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
CCM2-204ENST00000470837 H3BPC8 53 aa5.24□□□□□ -1.57
CCM2-204ENST00000470837 COX7CP15954 63 aa5.24□□□□□ -1.57
CCM2-204ENST00000470837 LOC101927531A0A1B0GV80 90 aa5.22□□□□□ -1.57
CCM2-204ENST00000470837 Q5W150 140 aa5.22□□□□□ -1.57
CCM2-204ENST00000470837 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
CCM2-204ENST00000470837 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
CCM2-204ENST00000470837 PCOTHQ58A44 107 aa5.21□□□□□ -1.58
CCM2-204ENST00000470837 C20orf197Q8N268 126 aa5.21□□□□□ -1.58
CCM2-204ENST00000470837 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
CCM2-204ENST00000470837 IGKV2-30P06310 120 aa5.2□□□□□ -1.58
CCM2-204ENST00000470837 C7orf65Q6ZTY9 151 aa5.19□□□□□ -1.58
CCM2-204ENST00000470837 HERC1Q15751 4861 aa5.19□□□□□ -1.58
CCM2-204ENST00000470837 PCP4P48539 62 aa5.18□□□□□ -1.58
CCM2-204ENST00000470837 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
CCM2-204ENST00000470837 A0A0U1RQV1 116 aa5.16□□□□□ -1.58
CCM2-204ENST00000470837 SPINK7P58062 85 aa5.16□□□□□ -1.58
CCM2-204ENST00000470837 CCDC179H3BU77 68 aa5.14□□□□□ -1.59
CCM2-204ENST00000470837 NDUFC1O43677 76 aa5.14□□□□□ -1.59
CCM2-204ENST00000470837 KLKP1Q107X0 134 aa5.14□□□□□ -1.59
CCM2-204ENST00000470837 CYP4F30PQ9H0H9 118 aa5.14□□□□□ -1.59
CCM2-204ENST00000470837 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
CCM2-204ENST00000470837 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
CCM2-204ENST00000470837 LPAP08519 4548 aa5.11□□□□□ -1.59
CCM2-204ENST00000470837 RBM12B-AS1Q9P1G2 102 aa5.08□□□□□ -1.6
CCM2-204ENST00000470837 LRP2P98164 4655 aa5.08□□□□□ -1.6
CCM2-204ENST00000470837 HRES1P13985 223 aa5.06□□□□□ -1.6
CCM2-204ENST00000470837 FAM236DA0A1B0GTK5 79 aa5.04□□□□□ -1.6
CCM2-204ENST00000470837 H7BZZ5 65 aa5.04□□□□□ -1.6
CCM2-204ENST00000470837 FAM236CP0DP71 79 aa5.04□□□□□ -1.6
CCM2-204ENST00000470837 C4orf26Q17RF5 130 aa5.04□□□□□ -1.6
CCM2-204ENST00000470837 SPANXA2-OT1Q8N9U9 137 aa5.04□□□□□ -1.6
CCM2-204ENST00000470837 TMEM258P61165 79 aa5.02□□□□□ -1.61
CCM2-204ENST00000470837 CYSTM1Q9H1C7 97 aa5.02□□□□□ -1.61
CCM2-204ENST00000470837 ATP5EP56381 51 aaPredicted RBP5.01□□□□□ -1.61
CCM2-204ENST00000470837 A8MUN3 132 aa5□□□□□ -1.61
CCM2-204ENST00000470837 COX6B2Q6YFQ2 88 aa5□□□□□ -1.61
CCM2-204ENST00000470837 ACYP2P14621 99 aa4.98□□□□□ -1.61
CCM2-204ENST00000470837 LCE2CQ5TA81 110 aa4.98□□□□□ -1.61
CCM2-204ENST00000470837 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
CCM2-204ENST00000470837 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
CCM2-204ENST00000470837 MPLKIPQ8TAP9 179 aa4.95□□□□□ -1.62
CCM2-204ENST00000470837 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
CCM2-204ENST00000470837 CHKB-CPT1BH3BT56 60 aa4.94□□□□□ -1.62
CCM2-204ENST00000470837 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
CCM2-204ENST00000470837 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.63
CCM2-204ENST00000470837 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms