RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 A0A087X002 238 aa8.3□□□□□ -1.08
NPHP4-207ENST00000470763 NOTCH2NLQ7Z3S9 236 aa8.3□□□□□ -1.08
NPHP4-207ENST00000470763 LINC00313P59037 77 aa8.28□□□□□ -1.08
NPHP4-207ENST00000470763 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
NPHP4-207ENST00000470763 A0A1B0GVX0 72 aa8.27□□□□□ -1.09
NPHP4-207ENST00000470763 DYNC2H1Q8NCM8 4307 aaKnown RBP8.27□□□□□ -1.09
NPHP4-207ENST00000470763 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
NPHP4-207ENST00000470763 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
NPHP4-207ENST00000470763 SACSQ9NZJ4 4579 aa8.26□□□□□ -1.09
NPHP4-207ENST00000470763 PANO1I0J062 215 aa8.25□□□□□ -1.09
NPHP4-207ENST00000470763 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
NPHP4-207ENST00000470763 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
NPHP4-207ENST00000470763 Q5W150 140 aa8.22□□□□□ -1.09
NPHP4-207ENST00000470763 RYR2Q92736 4967 aa8.21□□□□□ -1.09
NPHP4-207ENST00000470763 KRTAP13-1Q8IUC0 172 aa8.21□□□□□ -1.09
NPHP4-207ENST00000470763 ANAPC11Q9NYG5 84 aa8.21□□□□□ -1.1
NPHP4-207ENST00000470763 SPINK6Q6UWN8 80 aa8.2□□□□□ -1.1
NPHP4-207ENST00000470763 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
NPHP4-207ENST00000470763 HYDINQ4G0P3 5121 aa8.16□□□□□ -1.1
NPHP4-207ENST00000470763 UBE2DNLQ8IWF7 75 aa8.16□□□□□ -1.1
NPHP4-207ENST00000470763 ALMS1Q8TCU4 4167 aa8.16□□□□□ -1.1
NPHP4-207ENST00000470763 ACYP2P14621 99 aa8.14□□□□□ -1.11
NPHP4-207ENST00000470763 C14orf177Q52M58 125 aa8.14□□□□□ -1.11
NPHP4-207ENST00000470763 FRAS1Q86XX4 4008 aa8.14□□□□□ -1.11
NPHP4-207ENST00000470763 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.12□□□□□ -1.11
NPHP4-207ENST00000470763 A0A1B0GU69 56 aa8.11□□□□□ -1.11
NPHP4-207ENST00000470763 KRTAP13-3Q3SY46 172 aa8.11□□□□□ -1.11
NPHP4-207ENST00000470763 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
NPHP4-207ENST00000470763 LINC00483Q53H64 154 aa8.1□□□□□ -1.11
NPHP4-207ENST00000470763 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
NPHP4-207ENST00000470763 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
NPHP4-207ENST00000470763 H3BS24 57 aa8.08□□□□□ -1.12
NPHP4-207ENST00000470763 KMT2AQ03164 3969 aa8.07□□□□□ -1.12
NPHP4-207ENST00000470763 EPPK1P58107 5090 aaKnown RBP8.07□□□□□ -1.12
NPHP4-207ENST00000470763 DNAH8Q96JB1 4490 aa8.07□□□□□ -1.12
NPHP4-207ENST00000470763 DMAC1Q96GE9 116 aa8.06□□□□□ -1.12
NPHP4-207ENST00000470763 RTL8CO15255 209 aa8.04□□□□□ -1.12
NPHP4-207ENST00000470763 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
NPHP4-207ENST00000470763 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
NPHP4-207ENST00000470763 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
NPHP4-207ENST00000470763 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
NPHP4-207ENST00000470763 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
NPHP4-207ENST00000470763 CIRBP-AS1Q8TBR5 109 aa8.02□□□□□ -1.13
NPHP4-207ENST00000470763 APLNQ9ULZ1 77 aa8□□□□□ -1.13
NPHP4-207ENST00000470763 VPS13DQ5THJ4 4388 aa8□□□□□ -1.13
NPHP4-207ENST00000470763 UQCR11O14957 56 aa7.99□□□□□ -1.13
NPHP4-207ENST00000470763 IGLV5-52A0A0A0MRZ9 124 aa7.98□□□□□ -1.13
NPHP4-207ENST00000470763 CSAG1Q6PB30 78 aa7.98□□□□□ -1.13
NPHP4-207ENST00000470763 ZNF861PO60384 105 aa7.96□□□□□ -1.13
NPHP4-207ENST00000470763 NBDYA0A0U1RRE5 68 aa7.96□□□□□ -1.14
NPHP4-207ENST00000470763 Q6ZRN7 208 aaPredicted RBP7.95□□□□□ -1.14
NPHP4-207ENST00000470763 NUPR2A6NF83 97 aa7.94□□□□□ -1.14
NPHP4-207ENST00000470763 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
NPHP4-207ENST00000470763 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
NPHP4-207ENST00000470763 HECTD4Q9Y4D8 3996 aa7.92□□□□□ -1.14
NPHP4-207ENST00000470763 BIRC6Q9NR09 4857 aa7.92□□□□□ -1.14
NPHP4-207ENST00000470763 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
NPHP4-207ENST00000470763 DNAH2Q9P225 4427 aa7.9□□□□□ -1.14
NPHP4-207ENST00000470763 IGKV2D-30A0A075B6S6 120 aa7.9□□□□□ -1.14
NPHP4-207ENST00000470763 LY6G6CO95867 125 aa7.9□□□□□ -1.14
NPHP4-207ENST00000470763 DNAH17Q9UFH2 4485 aa7.89□□□□□ -1.15
NPHP4-207ENST00000470763 SPINK1P00995 79 aa7.86□□□□□ -1.15
NPHP4-207ENST00000470763 A0A087WTM6 91 aa7.85□□□□□ -1.15
NPHP4-207ENST00000470763 FAT2Q9NYQ8 4349 aa7.85□□□□□ -1.15
NPHP4-207ENST00000470763 IGLV7-43P04211 117 aa7.82□□□□□ -1.16
NPHP4-207ENST00000470763 PKHD1P08F94 4074 aa7.8□□□□□ -1.16
NPHP4-207ENST00000470763 PKD1P98161 4303 aa7.77□□□□□ -1.16
NPHP4-207ENST00000470763 KRTAP16-1A8MUX0 517 aa7.77□□□□□ -1.17
NPHP4-207ENST00000470763 SSBP3-AS1Q7Z2R9 100 aa7.77□□□□□ -1.17
NPHP4-207ENST00000470763 Q8N1X5 172 aa7.76□□□□□ -1.17
NPHP4-207ENST00000470763 FLG2Q5D862 2391 aaPredicted RBP7.74□□□□□ -1.17
NPHP4-207ENST00000470763 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
NPHP4-207ENST00000470763 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.18
NPHP4-207ENST00000470763 KIAA1109Q2LD37 5005 aa7.7□□□□□ -1.18
NPHP4-207ENST00000470763 DNAH11Q96DT5 4516 aa7.69□□□□□ -1.18
NPHP4-207ENST00000470763 HERC2O95714 4834 aa7.68□□□□□ -1.18
NPHP4-207ENST00000470763 H0YAA0 97 aa7.68□□□□□ -1.18
NPHP4-207ENST00000470763 Q6ZSA8 131 aa7.67□□□□□ -1.18
NPHP4-207ENST00000470763 DYNC1H1Q14204 4646 aaKnown RBP7.67□□□□□ -1.18
NPHP4-207ENST00000470763 A8MUU9 505 aa7.66□□□□□ -1.18
NPHP4-207ENST00000470763 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
NPHP4-207ENST00000470763 LINC00304Q8N9R0 145 aa7.64□□□□□ -1.19
NPHP4-207ENST00000470763 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
NPHP4-207ENST00000470763 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
NPHP4-207ENST00000470763 CRIPTQ9P021 101 aa7.61□□□□□ -1.19
NPHP4-207ENST00000470763 LRP1BQ9NZR2 4599 aa7.59□□□□□ -1.19
NPHP4-207ENST00000470763 ROMO1P60602 79 aa7.59□□□□□ -1.19
NPHP4-207ENST00000470763 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
NPHP4-207ENST00000470763 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
NPHP4-207ENST00000470763 RYR1P21817 5038 aa7.56□□□□□ -1.2
NPHP4-207ENST00000470763 HSPG2P98160 4391 aa7.56□□□□□ -1.2
NPHP4-207ENST00000470763 A0A1B0GU33 70 aa7.55□□□□□ -1.2
NPHP4-207ENST00000470763 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
NPHP4-207ENST00000470763 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.2
NPHP4-207ENST00000470763 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
NPHP4-207ENST00000470763 H1FX-AS1Q4G0G2 97 aa7.49□□□□□ -1.21
NPHP4-207ENST00000470763 ABCA13Q86UQ4 5058 aa7.49□□□□□ -1.21
NPHP4-207ENST00000470763 KRTAP17-1Q9BYP8 105 aa7.49□□□□□ -1.21
NPHP4-207ENST00000470763 VPS13BQ7Z7G8 4022 aa7.47□□□□□ -1.21
NPHP4-207ENST00000470763 KRTAP3-1Q9BYR8 98 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms