RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NDUFS5O43920 106 aa4.8□□□□□ -1.64
SMC4-212ENST00000470240 SSBP3-AS1Q7Z2R9 100 aa4.8□□□□□ -1.64
SMC4-212ENST00000470240 STAB2Q8WWQ8 2551 aa4.79□□□□□ -1.64
SMC4-212ENST00000470240 IGHV6-1A0A0B4J1U7 121 aa4.79□□□□□ -1.64
SMC4-212ENST00000470240 V9GYY9 64 aa4.79□□□□□ -1.64
SMC4-212ENST00000470240 CMYA5Q8N3K9 4069 aa4.78□□□□□ -1.64
SMC4-212ENST00000470240 FP248Q71RG6 208 aaPredicted RBP4.78□□□□□ -1.64
SMC4-212ENST00000470240 Q96NJ1 140 aa4.78□□□□□ -1.64
SMC4-212ENST00000470240 C8orf87E5RJ46 101 aa4.77□□□□□ -1.65
SMC4-212ENST00000470240 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
SMC4-212ENST00000470240 CIRBP-AS1Q8TBR5 109 aa4.77□□□□□ -1.65
SMC4-212ENST00000470240 MRPL34Q9BQ48 92 aaKnown RBP4.77□□□□□ -1.65
SMC4-212ENST00000470240 PRR4Q16378 134 aa4.75□□□□□ -1.65
SMC4-212ENST00000470240 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
SMC4-212ENST00000470240 FAM229BQ4G0N7 80 aa4.75□□□□□ -1.65
SMC4-212ENST00000470240 SPINK6Q6UWN8 80 aa4.74□□□□□ -1.65
SMC4-212ENST00000470240 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
SMC4-212ENST00000470240 ANAPC11Q9NYG5 84 aa4.74□□□□□ -1.65
SMC4-212ENST00000470240 Q1T7F1 81 aa4.73□□□□□ -1.65
SMC4-212ENST00000470240 C1orf195Q5TG92 126 aa4.73□□□□□ -1.65
SMC4-212ENST00000470240 LIMD2Q9BT23 127 aa4.73□□□□□ -1.65
SMC4-212ENST00000470240 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
SMC4-212ENST00000470240 DNAH1Q9P2D7 4330 aa4.73□□□□□ -1.65
SMC4-212ENST00000470240 LOC101927531A0A1B0GV80 90 aa4.72□□□□□ -1.65
SMC4-212ENST00000470240 ANK2Q01484 3957 aa4.71□□□□□ -1.66
SMC4-212ENST00000470240 IGLV7-46A0A075B6I9 117 aa4.71□□□□□ -1.66
SMC4-212ENST00000470240 KRTAP21-3Q3LHN1 58 aa4.71□□□□□ -1.66
SMC4-212ENST00000470240 Q6ZSA8 131 aa4.71□□□□□ -1.66
SMC4-212ENST00000470240 PCOTHQ58A44 107 aa4.7□□□□□ -1.66
SMC4-212ENST00000470240 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
SMC4-212ENST00000470240 LINC00313P59037 77 aa4.68□□□□□ -1.66
SMC4-212ENST00000470240 LINC00336Q6ZUF6 198 aa4.68□□□□□ -1.66
SMC4-212ENST00000470240 IGKV2-30P06310 120 aa4.67□□□□□ -1.66
SMC4-212ENST00000470240 KRTAP10-1P60331 282 aa4.67□□□□□ -1.66
SMC4-212ENST00000470240 COA5Q86WW8 74 aa4.67□□□□□ -1.66
SMC4-212ENST00000470240 DNAH9Q9NYC9 4486 aa4.66□□□□□ -1.66
SMC4-212ENST00000470240 COL7A1Q02388 2944 aa4.65□□□□□ -1.66
SMC4-212ENST00000470240 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
SMC4-212ENST00000470240 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
SMC4-212ENST00000470240 DYNC2H1Q8NCM8 4307 aaKnown RBP4.64□□□□□ -1.67
SMC4-212ENST00000470240 TYMSOSQ8TAI1 123 aa4.64□□□□□ -1.67
SMC4-212ENST00000470240 A0A087X002 238 aa4.63□□□□□ -1.67
SMC4-212ENST00000470240 PSPHP1O15172 72 aa4.63□□□□□ -1.67
SMC4-212ENST00000470240 NOTCH2NLQ7Z3S9 236 aa4.63□□□□□ -1.67
SMC4-212ENST00000470240 SPINK1P00995 79 aa4.62□□□□□ -1.67
SMC4-212ENST00000470240 KRTAP13-2Q52LG2 175 aa4.62□□□□□ -1.67
SMC4-212ENST00000470240 ACYP2P14621 99 aa4.61□□□□□ -1.67
SMC4-212ENST00000470240 SPAG11AQ6PDA7 123 aa4.61□□□□□ -1.67
SMC4-212ENST00000470240 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
SMC4-212ENST00000470240 A8MUN3 132 aa4.6□□□□□ -1.67
SMC4-212ENST00000470240 CHKB-CPT1BH3BT56 60 aa4.6□□□□□ -1.67
SMC4-212ENST00000470240 RPS29P62273 56 aaKnown RBP4.59□□□□□ -1.67
SMC4-212ENST00000470240 KRTAP1-4P0C5Y4 121 aa4.58□□□□□ -1.68
SMC4-212ENST00000470240 Q5W150 140 aa4.58□□□□□ -1.68
SMC4-212ENST00000470240 Q75L30 129 aa4.57□□□□□ -1.68
SMC4-212ENST00000470240 LINC00304Q8N9R0 145 aa4.57□□□□□ -1.68
SMC4-212ENST00000470240 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
SMC4-212ENST00000470240 TENM2Q9NT68 2774 aa4.57□□□□□ -1.68
SMC4-212ENST00000470240 A6NED7 52 aa4.56□□□□□ -1.68
SMC4-212ENST00000470240 HRES1P13985 223 aa4.56□□□□□ -1.68
SMC4-212ENST00000470240 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
SMC4-212ENST00000470240 Q5VV11 94 aa4.56□□□□□ -1.68
SMC4-212ENST00000470240 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
SMC4-212ENST00000470240 VPS13DQ5THJ4 4388 aa4.55□□□□□ -1.68
SMC4-212ENST00000470240 DNAH10Q8IVF4 4471 aa4.55□□□□□ -1.68
SMC4-212ENST00000470240 RETNLBQ9BQ08 111 aa4.53□□□□□ -1.68
SMC4-212ENST00000470240 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
SMC4-212ENST00000470240 KRTAP16-1A8MUX0 517 aa4.52□□□□□ -1.69
SMC4-212ENST00000470240 CSMD3Q7Z407 3707 aa4.51□□□□□ -1.69
SMC4-212ENST00000470240 C7orf65Q6ZTY9 151 aa4.5□□□□□ -1.69
SMC4-212ENST00000470240 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
SMC4-212ENST00000470240 LYSTQ99698 3801 aa4.49□□□□□ -1.69
SMC4-212ENST00000470240 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
SMC4-212ENST00000470240 SRRM2Q9UQ35 2752 aaKnown RBP4.49□□□□□ -1.69
SMC4-212ENST00000470240 PLECQ15149 4684 aaKnown RBP4.49□□□□□ -1.69
SMC4-212ENST00000470240 ATP11AUNQ6ZP68 121 aa4.48□□□□□ -1.69
SMC4-212ENST00000470240 SPTSSBQ8NFR3 76 aa4.48□□□□□ -1.69
SMC4-212ENST00000470240 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
SMC4-212ENST00000470240 DNAH7Q8WXX0 4024 aa4.48□□□□□ -1.69
SMC4-212ENST00000470240 ALMS1Q8TCU4 4167 aa4.48□□□□□ -1.69
SMC4-212ENST00000470240 STARD9Q9P2P6 4700 aa4.47□□□□□ -1.69
SMC4-212ENST00000470240 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
SMC4-212ENST00000470240 DNAH6Q9C0G6 4158 aa4.47□□□□□ -1.69
SMC4-212ENST00000470240 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.69
SMC4-212ENST00000470240 PRKDCP78527 4128 aaKnown RBP4.46□□□□□ -1.69
SMC4-212ENST00000470240 A0A1B0GU69 56 aa4.46□□□□□ -1.7
SMC4-212ENST00000470240 SMR3BP02814 79 aaPredicted RBP4.46□□□□□ -1.7
SMC4-212ENST00000470240 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
SMC4-212ENST00000470240 TGP01266 2768 aa4.45□□□□□ -1.7
SMC4-212ENST00000470240 A0A1B0GVY2 172 aa4.44□□□□□ -1.7
SMC4-212ENST00000470240 SEC61GP60059 68 aa4.43□□□□□ -1.7
SMC4-212ENST00000470240 FBN3Q75N90 2809 aa4.42□□□□□ -1.7
SMC4-212ENST00000470240 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
SMC4-212ENST00000470240 A8MUU9 505 aa4.4□□□□□ -1.71
SMC4-212ENST00000470240 LCA10Q71F78 164 aa4.4□□□□□ -1.71
SMC4-212ENST00000470240 C9orf92A6NGG3 77 aa4.39□□□□□ -1.71
SMC4-212ENST00000470240 SPINK7P58062 85 aa4.39□□□□□ -1.71
SMC4-212ENST00000470240 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
SMC4-212ENST00000470240 UQCR11O14957 56 aa4.38□□□□□ -1.71
SMC4-212ENST00000470240 KMT2AQ03164 3969 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms