RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 A0A0U1RQV1 116 aa13.51□□□□□ -0.25
KPNA4-202ENST00000469804 LINC00313P59037 77 aa13.5□□□□□ -0.25
KPNA4-202ENST00000469804 GTF2H5Q6ZYL4 71 aa13.49□□□□□ -0.25
KPNA4-202ENST00000469804 A0A1B0GVX0 72 aa13.47□□□□□ -0.25
KPNA4-202ENST00000469804 J3KT08 172 aa13.47□□□□□ -0.25
KPNA4-202ENST00000469804 C20orf166-AS1Q96NR2 134 aa13.47□□□□□ -0.25
KPNA4-202ENST00000469804 A8MUU9 505 aa13.46□□□□□ -0.25
KPNA4-202ENST00000469804 KRTAP16-1A8MUX0 517 aa13.46□□□□□ -0.25
KPNA4-202ENST00000469804 FAT4Q6V0I7 4981 aa13.46□□□□□ -0.26
KPNA4-202ENST00000469804 NREPQ16612 68 aa13.43□□□□□ -0.26
KPNA4-202ENST00000469804 ATP11AUNQ6ZP68 121 aa13.42□□□□□ -0.26
KPNA4-202ENST00000469804 C8orf87E5RJ46 101 aa13.38□□□□□ -0.27
KPNA4-202ENST00000469804 A8MWP4 228 aa13.37□□□□□ -0.27
KPNA4-202ENST00000469804 IGKV3D-7A0A0C4DH55 119 aa13.35□□□□□ -0.27
KPNA4-202ENST00000469804 NDUFB1O75438 58 aa13.35□□□□□ -0.27
KPNA4-202ENST00000469804 F8W1H4 67 aa13.34□□□□□ -0.27
KPNA4-202ENST00000469804 ETDBQ3ZM63 59 aa13.3□□□□□ -0.28
KPNA4-202ENST00000469804 Q6ZVQ6 151 aa13.29□□□□□ -0.28
KPNA4-202ENST00000469804 C8orf17Q9NRJ1 99 aa13.29□□□□□ -0.28
KPNA4-202ENST00000469804 KRTAP19-2Q3LHN2 52 aa13.28□□□□□ -0.28
KPNA4-202ENST00000469804 LCE2AQ5TA79 106 aaPredicted RBP13.28□□□□□ -0.28
KPNA4-202ENST00000469804 PRR15Q8IV56 129 aa13.26□□□□□ -0.29
KPNA4-202ENST00000469804 K7EQZ3 153 aa13.24□□□□□ -0.29
KPNA4-202ENST00000469804 LINC00846Q9NV44 126 aa13.24□□□□□ -0.29
KPNA4-202ENST00000469804 BPY2O14599 106 aa13.23□□□□□ -0.29
KPNA4-202ENST00000469804 LCE2CQ5TA81 110 aa13.23□□□□□ -0.29
KPNA4-202ENST00000469804 MMP24-AS1A0A0U1RRL7 71 aa13.18□□□□□ -0.3
KPNA4-202ENST00000469804 A0A1B0GV90 55 aa13.16□□□□□ -0.3
KPNA4-202ENST00000469804 Q8N9L7 120 aa13.15□□□□□ -0.3
KPNA4-202ENST00000469804 Q8N9P0 234 aaPredicted RBP13.15□□□□□ -0.3
KPNA4-202ENST00000469804 UBL5Q9BZL1 73 aa13.15□□□□□ -0.3
KPNA4-202ENST00000469804 TMEM254Q8TBM7 123 aa13.09□□□□□ -0.31
KPNA4-202ENST00000469804 ZCCHC13Q8WW36 166 aaKnown RBP13.09□□□□□ -0.31
KPNA4-202ENST00000469804 MRPL34Q9BQ48 92 aaKnown RBP13.08□□□□□ -0.32
KPNA4-202ENST00000469804 COX6B2Q6YFQ2 88 aa13.07□□□□□ -0.32
KPNA4-202ENST00000469804 hDV103S1A0JD37 113 aa13.06□□□□□ -0.32
KPNA4-202ENST00000469804 MT1HP80294 61 aa13.04□□□□□ -0.32
KPNA4-202ENST00000469804 WFDC13Q8IUB5 93 aa13.03□□□□□ -0.32
KPNA4-202ENST00000469804 NDUFS5O43920 106 aa12.97□□□□□ -0.33
KPNA4-202ENST00000469804 CASC2Q6XLA1 102 aa12.96□□□□□ -0.33
KPNA4-202ENST00000469804 HRES1P13985 223 aa12.94□□□□□ -0.34
KPNA4-202ENST00000469804 FLGP20930 4061 aaPredicted RBP12.9□□□□□ -0.34
KPNA4-202ENST00000469804 ACYP1P07311 99 aa12.89□□□□□ -0.35
KPNA4-202ENST00000469804 SPINK7P58062 85 aa12.89□□□□□ -0.35
KPNA4-202ENST00000469804 CXCL6P80162 114 aa12.89□□□□□ -0.35
KPNA4-202ENST00000469804 HCG22E2RYF7 251 aa12.88□□□□□ -0.35
KPNA4-202ENST00000469804 FAM240AA0A1B0GVK7 77 aa12.87□□□□□ -0.35
KPNA4-202ENST00000469804 MPLKIPQ8TAP9 179 aa12.86□□□□□ -0.35
KPNA4-202ENST00000469804 FAM236DA0A1B0GTK5 79 aa12.81□□□□□ -0.36
KPNA4-202ENST00000469804 FAM236CP0DP71 79 aa12.81□□□□□ -0.36
KPNA4-202ENST00000469804 Q5W150 140 aa12.81□□□□□ -0.36
KPNA4-202ENST00000469804 M0R2T5 61 aa12.8□□□□□ -0.36
KPNA4-202ENST00000469804 RBM12B-AS1Q9P1G2 102 aa12.79□□□□□ -0.36
KPNA4-202ENST00000469804 KRTAP10-6P60371 365 aaPredicted RBP12.71□□□□□ -0.37
KPNA4-202ENST00000469804 IGKV2D-30A0A075B6S6 120 aa12.7□□□□□ -0.38
KPNA4-202ENST00000469804 IGKV2-30P06310 120 aa12.7□□□□□ -0.38
KPNA4-202ENST00000469804 ATP5EP2Q5VTU8 51 aa12.7□□□□□ -0.38
KPNA4-202ENST00000469804 LORP23490 312 aaPredicted RBP12.68□□□□□ -0.38
KPNA4-202ENST00000469804 HIST1H4AP62805 103 aaKnown RBP12.64□□□□□ -0.39
KPNA4-202ENST00000469804 C7orf65Q6ZTY9 151 aa12.63□□□□□ -0.39
KPNA4-202ENST00000469804 LINC00643Q86TS7 51 aa12.63□□□□□ -0.39
KPNA4-202ENST00000469804 KRTAP9-2Q9BYQ4 174 aa12.59□□□□□ -0.39
KPNA4-202ENST00000469804 TP53AIP1Q9HCN2 124 aa12.57□□□□□ -0.4
KPNA4-202ENST00000469804 J3QR89 54 aa12.56□□□□□ -0.4
KPNA4-202ENST00000469804 A0A087WVE0 104 aa12.55□□□□□ -0.4
KPNA4-202ENST00000469804 C4orf26Q17RF5 130 aa12.43□□□□□ -0.42
KPNA4-202ENST00000469804 LCE2DQ5TA82 110 aaPredicted RBP12.4□□□□□ -0.42
KPNA4-202ENST00000469804 TRAV22A0A0B4J277 110 aa12.39□□□□□ -0.43
KPNA4-202ENST00000469804 KRTAP9-8Q9BYQ0 159 aa12.39□□□□□ -0.43
KPNA4-202ENST00000469804 H1FX-AS1Q4G0G2 97 aa12.37□□□□□ -0.43
KPNA4-202ENST00000469804 UQCRQO14949 82 aa12.33□□□□□ -0.44
KPNA4-202ENST00000469804 H0Y9P7 68 aa12.29□□□□□ -0.44
KPNA4-202ENST00000469804 K7ERU9 68 aa12.29□□□□□ -0.44
KPNA4-202ENST00000469804 CYP4F30PQ9H0H9 118 aa12.29□□□□□ -0.44
KPNA4-202ENST00000469804 MT2AP02795 61 aa12.27□□□□□ -0.45
KPNA4-202ENST00000469804 LOC101927531A0A1B0GV80 90 aa12.26□□□□□ -0.45
KPNA4-202ENST00000469804 KRTAP3-1Q9BYR8 98 aa12.26□□□□□ -0.45
KPNA4-202ENST00000469804 C1orf64Q8NEQ6 169 aa12.23□□□□□ -0.45
KPNA4-202ENST00000469804 OCR1Q9BZK8 76 aa12.23□□□□□ -0.45
KPNA4-202ENST00000469804 MT-ATP8P03928 68 aa12.2□□□□□ -0.46
KPNA4-202ENST00000469804 ATOX1O00244 68 aa12.19□□□□□ -0.46
KPNA4-202ENST00000469804 MT1FP04733 61 aa12.19□□□□□ -0.46
KPNA4-202ENST00000469804 LINC00208Q96KT6 92 aa12.12□□□□□ -0.47
KPNA4-202ENST00000469804 KRTAP10-10P60014 251 aa12.1□□□□□ -0.47
KPNA4-202ENST00000469804 IMUPQ9GZP8 106 aa12.1□□□□□ -0.47
KPNA4-202ENST00000469804 SCGB1A1P11684 91 aa12.09□□□□□ -0.47
KPNA4-202ENST00000469804 MP68P56378 58 aa12.07□□□□□ -0.48
KPNA4-202ENST00000469804 S4R3F8 94 aa12.07□□□□□ -0.48
KPNA4-202ENST00000469804 KLKP1Q107X0 134 aa12.03□□□□□ -0.48
KPNA4-202ENST00000469804 C5orf47Q569G3 176 aa12.03□□□□□ -0.48
KPNA4-202ENST00000469804 KRTAP9-6A0A140TA67 174 aa12.01□□□□□ -0.49
KPNA4-202ENST00000469804 LCA10Q71F78 164 aa12.01□□□□□ -0.49
KPNA4-202ENST00000469804 FAM236AA0A1B0GUQ0 79 aa11.99□□□□□ -0.49
KPNA4-202ENST00000469804 FAM236BA0A1B0GV22 79 aa11.99□□□□□ -0.49
KPNA4-202ENST00000469804 KRTAP9-3Q9BYQ3 159 aa11.97□□□□□ -0.49
KPNA4-202ENST00000469804 CRCT1Q9UGL9 99 aa11.94□□□□□ -0.5
KPNA4-202ENST00000469804 H3BPC8 53 aa11.92□□□□□ -0.5
KPNA4-202ENST00000469804 FSIP2Q5CZC0 6907 aa11.92□□□□□ -0.5
KPNA4-202ENST00000469804 KRTAP3-3Q9BYR6 98 aa11.89□□□□□ -0.51
KPNA4-202ENST00000469804 CSAG1Q6PB30 78 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 262.9 ms