RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 A0A1B0GVX0 72 aa10.91□□□□□ -0.66
RTN4R-205ENST00000469601 NAA38Q9BRA0 125 aaKnown RBP10.91□□□□□ -0.66
RTN4R-205ENST00000469601 A0A1B0GW54 56 aa10.9□□□□□ -0.66
RTN4R-205ENST00000469601 Q6ZQT0 140 aa10.9□□□□□ -0.66
RTN4R-205ENST00000469601 TSTD3H0UI37 97 aa10.89□□□□□ -0.67
RTN4R-205ENST00000469601 PDE6GP18545 87 aa10.89□□□□□ -0.67
RTN4R-205ENST00000469601 LOC110117498A0A087WWA1 95 aa10.86□□□□□ -0.67
RTN4R-205ENST00000469601 NDUFB1O75438 58 aa10.85□□□□□ -0.67
RTN4R-205ENST00000469601 BATFQ16520 125 aa10.8□□□□□ -0.68
RTN4R-205ENST00000469601 CRCT1Q9UGL9 99 aa10.8□□□□□ -0.68
RTN4R-205ENST00000469601 RBM12B-AS1Q9P1G2 102 aa10.79□□□□□ -0.68
RTN4R-205ENST00000469601 FAM236DA0A1B0GTK5 79 aa10.78□□□□□ -0.68
RTN4R-205ENST00000469601 FAM236CP0DP71 79 aa10.78□□□□□ -0.68
RTN4R-205ENST00000469601 C14orf132Q9NPU4 83 aa10.78□□□□□ -0.68
RTN4R-205ENST00000469601 A8MWP4 228 aa10.76□□□□□ -0.69
RTN4R-205ENST00000469601 FLGP20930 4061 aaPredicted RBP10.74□□□□□ -0.69
RTN4R-205ENST00000469601 ZCCHC13Q8WW36 166 aaKnown RBP10.73□□□□□ -0.69
RTN4R-205ENST00000469601 HRES1P13985 223 aa10.72□□□□□ -0.69
RTN4R-205ENST00000469601 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
RTN4R-205ENST00000469601 NREPQ16612 68 aa10.71□□□□□ -0.69
RTN4R-205ENST00000469601 Q8N9P0 234 aaPredicted RBP10.71□□□□□ -0.69
RTN4R-205ENST00000469601 MPLKIPQ8TAP9 179 aa10.71□□□□□ -0.69
RTN4R-205ENST00000469601 C8orf17Q9NRJ1 99 aa10.71□□□□□ -0.69
RTN4R-205ENST00000469601 H3BT86 120 aa10.69□□□□□ -0.7
RTN4R-205ENST00000469601 IGKV3D-7A0A0C4DH55 119 aa10.68□□□□□ -0.7
RTN4R-205ENST00000469601 LOC105371267A0A1B0GV96 52 aa10.67□□□□□ -0.7
RTN4R-205ENST00000469601 MTURNQ8N3F0 131 aa10.67□□□□□ -0.7
RTN4R-205ENST00000469601 A0A1W2PPM0 123 aa10.66□□□□□ -0.7
RTN4R-205ENST00000469601 PRR15Q8IV56 129 aa10.65□□□□□ -0.7
RTN4R-205ENST00000469601 TAX1BP3O14907 124 aa10.64□□□□□ -0.71
RTN4R-205ENST00000469601 SPINK7P58062 85 aa10.63□□□□□ -0.71
RTN4R-205ENST00000469601 Q6ZVQ6 151 aa10.63□□□□□ -0.71
RTN4R-205ENST00000469601 FSIP2Q5CZC0 6907 aa10.61□□□□□ -0.71
RTN4R-205ENST00000469601 KRTAP9-8Q9BYQ0 159 aa10.6□□□□□ -0.71
RTN4R-205ENST00000469601 TMEM254Q8TBM7 123 aa10.55□□□□□ -0.72
RTN4R-205ENST00000469601 MRPL34Q9BQ48 92 aaKnown RBP10.54□□□□□ -0.72
RTN4R-205ENST00000469601 MMP24-AS1A0A0U1RRL7 71 aa10.53□□□□□ -0.72
RTN4R-205ENST00000469601 SPCS1Q9Y6A9 102 aa10.52□□□□□ -0.73
RTN4R-205ENST00000469601 hDV103S1A0JD37 113 aa10.51□□□□□ -0.73
RTN4R-205ENST00000469601 BPY2O14599 106 aa10.51□□□□□ -0.73
RTN4R-205ENST00000469601 K7EQZ3 153 aa10.5□□□□□ -0.73
RTN4R-205ENST00000469601 WFDC13Q8IUB5 93 aa10.47□□□□□ -0.73
RTN4R-205ENST00000469601 NDUFS5O43920 106 aa10.46□□□□□ -0.73
RTN4R-205ENST00000469601 MT2AP02795 61 aa10.45□□□□□ -0.74
RTN4R-205ENST00000469601 COL5A1-AS1Q5SY13 56 aa10.44□□□□□ -0.74
RTN4R-205ENST00000469601 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
RTN4R-205ENST00000469601 KRTAP10-10P60014 251 aa10.38□□□□□ -0.75
RTN4R-205ENST00000469601 MT1FP04733 61 aa10.36□□□□□ -0.75
RTN4R-205ENST00000469601 CASC2Q6XLA1 102 aa10.35□□□□□ -0.75
RTN4R-205ENST00000469601 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
RTN4R-205ENST00000469601 K7EP34 96 aa10.33□□□□□ -0.76
RTN4R-205ENST00000469601 Q8N9L7 120 aa10.32□□□□□ -0.76
RTN4R-205ENST00000469601 PRO0461Q9UI25 63 aa10.32□□□□□ -0.76
RTN4R-205ENST00000469601 IGKV2D-30A0A075B6S6 120 aa10.29□□□□□ -0.76
RTN4R-205ENST00000469601 IGKV2-30P06310 120 aa10.29□□□□□ -0.76
RTN4R-205ENST00000469601 C7orf65Q6ZTY9 151 aa10.29□□□□□ -0.76
RTN4R-205ENST00000469601 HCG22E2RYF7 251 aa10.28□□□□□ -0.76
RTN4R-205ENST00000469601 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
RTN4R-205ENST00000469601 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
RTN4R-205ENST00000469601 Q5W150 140 aa10.27□□□□□ -0.77
RTN4R-205ENST00000469601 KRTAP9-3Q9BYQ3 159 aa10.27□□□□□ -0.77
RTN4R-205ENST00000469601 CXCL6P80162 114 aa10.26□□□□□ -0.77
RTN4R-205ENST00000469601 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
RTN4R-205ENST00000469601 LCE2BO14633 110 aa10.2□□□□□ -0.78
RTN4R-205ENST00000469601 F8W1H4 67 aa10.18□□□□□ -0.78
RTN4R-205ENST00000469601 USH2AO75445 5202 aa10.11□□□□□ -0.79
RTN4R-205ENST00000469601 PCP4L1A6NKN8 68 aa10.1□□□□□ -0.79
RTN4R-205ENST00000469601 C4orf26Q17RF5 130 aa10.1□□□□□ -0.79
RTN4R-205ENST00000469601 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
RTN4R-205ENST00000469601 TP53AIP1Q9HCN2 124 aa10.08□□□□□ -0.8
RTN4R-205ENST00000469601 KRTAP19-1Q8IUB9 90 aa10.05□□□□□ -0.8
RTN4R-205ENST00000469601 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.03□□□□□ -0.8
RTN4R-205ENST00000469601 SSPOA2VEC9 5147 aa10.01□□□□□ -0.81
RTN4R-205ENST00000469601 ACYP1P07311 99 aa9.96□□□□□ -0.82
RTN4R-205ENST00000469601 C1orf64Q8NEQ6 169 aa9.93□□□□□ -0.82
RTN4R-205ENST00000469601 KRTAP9-7A8MTY7 169 aa9.91□□□□□ -0.82
RTN4R-205ENST00000469601 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
RTN4R-205ENST00000469601 KRTAP3-1Q9BYR8 98 aa9.9□□□□□ -0.82
RTN4R-205ENST00000469601 S4R3F8 94 aa9.9□□□□□ -0.82
RTN4R-205ENST00000469601 KRTAP19-6Q3LI70 58 aa9.89□□□□□ -0.83
RTN4R-205ENST00000469601 FAM240AA0A1B0GVK7 77 aa9.88□□□□□ -0.83
RTN4R-205ENST00000469601 ATP5EP2Q5VTU8 51 aa9.87□□□□□ -0.83
RTN4R-205ENST00000469601 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
RTN4R-205ENST00000469601 FCGBPQ9Y6R7 5405 aaPredicted RBP9.84□□□□□ -0.83
RTN4R-205ENST00000469601 TRAV22A0A0B4J277 110 aa9.83□□□□□ -0.84
RTN4R-205ENST00000469601 FAM236AA0A1B0GUQ0 79 aa9.82□□□□□ -0.84
RTN4R-205ENST00000469601 FAM236BA0A1B0GV22 79 aa9.82□□□□□ -0.84
RTN4R-205ENST00000469601 CYP4F30PQ9H0H9 118 aa9.82□□□□□ -0.84
RTN4R-205ENST00000469601 LOC101927531A0A1B0GV80 90 aa9.8□□□□□ -0.84
RTN4R-205ENST00000469601 LCA10Q71F78 164 aa9.8□□□□□ -0.84
RTN4R-205ENST00000469601 HIST1H4AP62805 103 aaKnown RBP9.78□□□□□ -0.84
RTN4R-205ENST00000469601 UQCRQO14949 82 aa9.74□□□□□ -0.85
RTN4R-205ENST00000469601 ATOX1O00244 68 aa9.71□□□□□ -0.86
RTN4R-205ENST00000469601 LINC00643Q86TS7 51 aa9.68□□□□□ -0.86
RTN4R-205ENST00000469601 H0Y9P7 68 aa9.65□□□□□ -0.86
RTN4R-205ENST00000469601 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
RTN4R-205ENST00000469601 SPRR2GQ9BYE4 73 aa9.61□□□□□ -0.87
RTN4R-205ENST00000469601 KLKP1Q107X0 134 aa9.6□□□□□ -0.87
RTN4R-205ENST00000469601 A0A087WVE0 104 aa9.59□□□□□ -0.87
RTN4R-205ENST00000469601 Q5VV11 94 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms