RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 DNAH8Q96JB1 4490 aa3.52□□□□□ -1.85
PTCD3-208ENST00000469585 MYCBP2O75592 4640 aa3.51□□□□□ -1.85
PTCD3-208ENST00000469585 TRBV20-1A0A075B6N2 111 aa3.51□□□□□ -1.85
PTCD3-208ENST00000469585 TRACP01848 142 aa3.51□□□□□ -1.85
PTCD3-208ENST00000469585 SEC61GP60059 68 aa3.51□□□□□ -1.85
PTCD3-208ENST00000469585 TPRXLQ17RH7 258 aa3.51□□□□□ -1.85
PTCD3-208ENST00000469585 ANKRD29Q8N6D5 301 aa3.51□□□□□ -1.85
PTCD3-208ENST00000469585 DSCR8Q96T75 97 aa3.51□□□□□ -1.85
PTCD3-208ENST00000469585 LST1O00453 97 aa3.5□□□□□ -1.85
PTCD3-208ENST00000469585 TEN1Q86WV5 123 aa3.5□□□□□ -1.85
PTCD3-208ENST00000469585 ABCA13Q86UQ4 5058 aa3.49□□□□□ -1.85
PTCD3-208ENST00000469585 TRBV7-7A0A0K0K1E9 115 aa3.49□□□□□ -1.85
PTCD3-208ENST00000469585 H3BUT2 72 aa3.49□□□□□ -1.85
PTCD3-208ENST00000469585 RBM3P98179 157 aaKnown RBP3.49□□□□□ -1.85
PTCD3-208ENST00000469585 VPS25Q9BRG1 176 aa3.49□□□□□ -1.85
PTCD3-208ENST00000469585 JMJD7-PLA2G4BH0Y9G9 81 aa3.48□□□□□ -1.85
PTCD3-208ENST00000469585 BAALC-AS2P0C853 105 aa3.48□□□□□ -1.85
PTCD3-208ENST00000469585 PDE6GP18545 87 aa3.48□□□□□ -1.85
PTCD3-208ENST00000469585 Q5XG85 94 aa3.48□□□□□ -1.85
PTCD3-208ENST00000469585 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
PTCD3-208ENST00000469585 IGFL1Q6UW32 110 aa3.48□□□□□ -1.85
PTCD3-208ENST00000469585 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
PTCD3-208ENST00000469585 A0A1B0GV72 72 aa3.47□□□□□ -1.85
PTCD3-208ENST00000469585 C9JAW5 83 aa3.47□□□□□ -1.85
PTCD3-208ENST00000469585 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
PTCD3-208ENST00000469585 CCKP06307 115 aa3.46□□□□□ -1.86
PTCD3-208ENST00000469585 COL5A1-AS1Q5SY13 56 aa3.46□□□□□ -1.86
PTCD3-208ENST00000469585 Q6Q795 121 aa3.46□□□□□ -1.86
PTCD3-208ENST00000469585 A0A087WSZ3 146 aa3.45□□□□□ -1.86
PTCD3-208ENST00000469585 TRBV7-4A0A0J9YYF1 115 aa3.45□□□□□ -1.86
PTCD3-208ENST00000469585 ASB16-AS1Q495Z4 193 aa3.45□□□□□ -1.86
PTCD3-208ENST00000469585 SIGMAR1Q99720 223 aa3.45□□□□□ -1.86
PTCD3-208ENST00000469585 NAA38Q9BRA0 125 aaKnown RBP3.44□□□□□ -1.86
PTCD3-208ENST00000469585 PKHD1L1Q86WI1 4243 aa3.44□□□□□ -1.86
PTCD3-208ENST00000469585 A0A0G2JQZ4 141 aa3.43□□□□□ -1.86
PTCD3-208ENST00000469585 A0A1B0GW54 56 aa3.43□□□□□ -1.86
PTCD3-208ENST00000469585 A0A1W2PPM0 123 aa3.43□□□□□ -1.86
PTCD3-208ENST00000469585 C9orf92A6NGG3 77 aa3.43□□□□□ -1.86
PTCD3-208ENST00000469585 PCP4L1A6NKN8 68 aa3.43□□□□□ -1.86
PTCD3-208ENST00000469585 NDUFB1O75438 58 aa3.43□□□□□ -1.86
PTCD3-208ENST00000469585 C1orf195Q5TG92 126 aa3.43□□□□□ -1.86
PTCD3-208ENST00000469585 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
PTCD3-208ENST00000469585 H3BT86 120 aa3.42□□□□□ -1.86
PTCD3-208ENST00000469585 J3KT08 172 aa3.42□□□□□ -1.86
PTCD3-208ENST00000469585 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
PTCD3-208ENST00000469585 GTF2H5Q6ZYL4 71 aa3.42□□□□□ -1.86
PTCD3-208ENST00000469585 SPCS1Q9Y6A9 102 aa3.42□□□□□ -1.86
PTCD3-208ENST00000469585 IGKV4-1P06312 121 aa3.41□□□□□ -1.86
PTCD3-208ENST00000469585 ATP11AUNQ6ZP68 121 aa3.41□□□□□ -1.86
PTCD3-208ENST00000469585 LOC110117498A0A087WWA1 95 aa3.39□□□□□ -1.87
PTCD3-208ENST00000469585 TAX1BP3O14907 124 aa3.39□□□□□ -1.87
PTCD3-208ENST00000469585 NREPQ16612 68 aa3.39□□□□□ -1.87
PTCD3-208ENST00000469585 OBSCN-AS1Q96MR7 158 aa3.39□□□□□ -1.87
PTCD3-208ENST00000469585 Q96NJ1 140 aa3.39□□□□□ -1.87
PTCD3-208ENST00000469585 C14orf132Q9NPU4 83 aa3.39□□□□□ -1.87
PTCD3-208ENST00000469585 FAT3Q8TDW7 4589 aa3.38□□□□□ -1.87
PTCD3-208ENST00000469585 A0A1W2PNM2 257 aa3.38□□□□□ -1.87
PTCD3-208ENST00000469585 LINC00313P59037 77 aa3.38□□□□□ -1.87
PTCD3-208ENST00000469585 Q8N9L7 120 aa3.38□□□□□ -1.87
PTCD3-208ENST00000469585 IGHV6-1A0A0B4J1U7 121 aa3.37□□□□□ -1.87
PTCD3-208ENST00000469585 C8orf87E5RJ46 101 aa3.37□□□□□ -1.87
PTCD3-208ENST00000469585 Q6ZQT0 140 aa3.36□□□□□ -1.87
PTCD3-208ENST00000469585 UBL5Q9BZL1 73 aa3.36□□□□□ -1.87
PTCD3-208ENST00000469585 HERC1Q15751 4861 aa3.36□□□□□ -1.87
PTCD3-208ENST00000469585 TNXBP22105 4242 aa3.36□□□□□ -1.87
PTCD3-208ENST00000469585 K7EP34 96 aa3.35□□□□□ -1.87
PTCD3-208ENST00000469585 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
PTCD3-208ENST00000469585 F8W1H4 67 aa3.34□□□□□ -1.87
PTCD3-208ENST00000469585 DEFB116Q30KQ4 102 aa3.34□□□□□ -1.87
PTCD3-208ENST00000469585 PCOTHQ58A44 107 aa3.34□□□□□ -1.87
PTCD3-208ENST00000469585 A0A1B0GVX0 72 aa3.33□□□□□ -1.88
PTCD3-208ENST00000469585 BPY2O14599 106 aa3.33□□□□□ -1.88
PTCD3-208ENST00000469585 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
PTCD3-208ENST00000469585 A8MWP4 228 aa3.32□□□□□ -1.88
PTCD3-208ENST00000469585 LINC00472Q9H8W2 130 aa3.32□□□□□ -1.88
PTCD3-208ENST00000469585 PRO0461Q9UI25 63 aa3.32□□□□□ -1.88
PTCD3-208ENST00000469585 NDUFS5O43920 106 aa3.3□□□□□ -1.88
PTCD3-208ENST00000469585 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
PTCD3-208ENST00000469585 C20orf166-AS1Q96NR2 134 aa3.29□□□□□ -1.88
PTCD3-208ENST00000469585 FAM236DA0A1B0GTK5 79 aa3.28□□□□□ -1.88
PTCD3-208ENST00000469585 FAM236CP0DP71 79 aa3.28□□□□□ -1.88
PTCD3-208ENST00000469585 PRR15Q8IV56 129 aa3.28□□□□□ -1.88
PTCD3-208ENST00000469585 RBM12B-AS1Q9P1G2 102 aa3.28□□□□□ -1.88
PTCD3-208ENST00000469585 hDV103S1A0JD37 113 aa3.27□□□□□ -1.89
PTCD3-208ENST00000469585 A8MUU9 505 aa3.27□□□□□ -1.89
PTCD3-208ENST00000469585 J3QR89 54 aa3.27□□□□□ -1.89
PTCD3-208ENST00000469585 ACYP1P07311 99 aa3.27□□□□□ -1.89
PTCD3-208ENST00000469585 C8orf17Q9NRJ1 99 aa3.27□□□□□ -1.89
PTCD3-208ENST00000469585 ETDBQ3ZM63 59 aa3.26□□□□□ -1.89
PTCD3-208ENST00000469585 M0R2T5 61 aa3.25□□□□□ -1.89
PTCD3-208ENST00000469585 CASC2Q6XLA1 102 aa3.25□□□□□ -1.89
PTCD3-208ENST00000469585 TMEM254Q8TBM7 123 aa3.25□□□□□ -1.89
PTCD3-208ENST00000469585 MRPL34Q9BQ48 92 aaKnown RBP3.25□□□□□ -1.89
PTCD3-208ENST00000469585 IGKV3D-7A0A0C4DH55 119 aa3.24□□□□□ -1.89
PTCD3-208ENST00000469585 A0A1B0GV90 55 aa3.24□□□□□ -1.89
PTCD3-208ENST00000469585 ATP5EP2Q5VTU8 51 aa3.24□□□□□ -1.89
PTCD3-208ENST00000469585 ZCCHC13Q8WW36 166 aaKnown RBP3.24□□□□□ -1.89
PTCD3-208ENST00000469585 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
PTCD3-208ENST00000469585 LRP2P98164 4655 aa3.23□□□□□ -1.89
PTCD3-208ENST00000469585 K7EQZ3 153 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms