RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 HTN3P15516 51 aa3.18□□□□□ -1.9
UBE3C-204ENST00000469336 ZANQ9Y493 2812 aa3.18□□□□□ -1.9
UBE3C-204ENST00000469336 COL12A1Q99715 3063 aa3.18□□□□□ -1.9
UBE3C-204ENST00000469336 ITPR1Q14643 2758 aa3.17□□□□□ -1.9
UBE3C-204ENST00000469336 ABCA12Q86UK0 2595 aa3.17□□□□□ -1.9
UBE3C-204ENST00000469336 FLNCQ14315 2725 aa3.17□□□□□ -1.9
UBE3C-204ENST00000469336 CFAP46Q8IYW2 2715 aa3.17□□□□□ -1.9
UBE3C-204ENST00000469336 CRYBG3Q68DQ2 2970 aa3.16□□□□□ -1.9
UBE3C-204ENST00000469336 TEX15Q9BXT5 2789 aa3.16□□□□□ -1.9
UBE3C-204ENST00000469336 CELSR2Q9HCU4 2923 aa3.16□□□□□ -1.9
UBE3C-204ENST00000469336 MMP24-AS1A0A0U1RRL7 71 aa3.16□□□□□ -1.9
UBE3C-204ENST00000469336 DEFB4AO15263 64 aa3.16□□□□□ -1.9
UBE3C-204ENST00000469336 Q5W150 140 aa3.16□□□□□ -1.9
UBE3C-204ENST00000469336 SPTSSBQ8NFR3 76 aa3.16□□□□□ -1.9
UBE3C-204ENST00000469336 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
UBE3C-204ENST00000469336 PRB1P04280 392 aa3.15□□□□□ -1.91
UBE3C-204ENST00000469336 LINC00483Q53H64 154 aa3.15□□□□□ -1.91
UBE3C-204ENST00000469336 HIVEP2P31629 2446 aa3.14□□□□□ -1.91
UBE3C-204ENST00000469336 USP24Q9UPU5 2620 aa3.14□□□□□ -1.91
UBE3C-204ENST00000469336 APCP25054 2843 aa3.14□□□□□ -1.91
UBE3C-204ENST00000469336 ITPR3Q14573 2671 aa3.14□□□□□ -1.91
UBE3C-204ENST00000469336 POLQO75417 2590 aa3.13□□□□□ -1.91
UBE3C-204ENST00000469336 UBR5O95071 2799 aaPredicted RBP3.13□□□□□ -1.91
UBE3C-204ENST00000469336 IGKV2-24A0A0C4DH68 120 aa3.13□□□□□ -1.91
UBE3C-204ENST00000469336 TEP1Q99973 2627 aaKnown RBP3.12□□□□□ -1.91
UBE3C-204ENST00000469336 C8orf17Q9NRJ1 99 aa3.12□□□□□ -1.91
UBE3C-204ENST00000469336 SONP18583 2426 aaKnown RBP3.12□□□□□ -1.91
UBE3C-204ENST00000469336 IGSF10Q6WRI0 2623 aa3.11□□□□□ -1.91
UBE3C-204ENST00000469336 HELZ2Q9BYK8 2649 aaKnown RBP3.11□□□□□ -1.91
UBE3C-204ENST00000469336 ACYP2P14621 99 aa3.11□□□□□ -1.91
UBE3C-204ENST00000469336 ZNF706Q9Y5V0 76 aaPredicted RBP3.11□□□□□ -1.91
UBE3C-204ENST00000469336 SETD2Q9BYW2 2564 aaPredicted RBP3.11□□□□□ -1.91
UBE3C-204ENST00000469336 FLNAP21333 2647 aaKnown RBP3.1□□□□□ -1.91
UBE3C-204ENST00000469336 FBN2P35556 2912 aa3.1□□□□□ -1.91
UBE3C-204ENST00000469336 HRES1P13985 223 aa3.1□□□□□ -1.91
UBE3C-204ENST00000469336 MRPL34Q9BQ48 92 aaKnown RBP3.1□□□□□ -1.91
UBE3C-204ENST00000469336 NBEAL2Q6ZNJ1 2754 aa3.09□□□□□ -1.91
UBE3C-204ENST00000469336 NF1P21359 2839 aa3.09□□□□□ -1.91
UBE3C-204ENST00000469336 C8orf87E5RJ46 101 aa3.09□□□□□ -1.91
UBE3C-204ENST00000469336 SPAG11AQ6PDA7 123 aa3.09□□□□□ -1.91
UBE3C-204ENST00000469336 CCDC168Q8NDH2 2452 aa3.09□□□□□ -1.92
UBE3C-204ENST00000469336 CENPEQ02224 2701 aa3.08□□□□□ -1.92
UBE3C-204ENST00000469336 NIPBLQ6KC79 2804 aaeCLIP3.08□□□□□ -1.92
UBE3C-204ENST00000469336 PRLHP81277 87 aa3.08□□□□□ -1.92
UBE3C-204ENST00000469336 LINC01554Q52M75 96 aa3.08□□□□□ -1.92
UBE3C-204ENST00000469336 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
UBE3C-204ENST00000469336 KRTAP13-1Q8IUC0 172 aa3.08□□□□□ -1.92
UBE3C-204ENST00000469336 Q96NJ1 140 aa3.08□□□□□ -1.92
UBE3C-204ENST00000469336 ANK3Q12955 4377 aaKnown RBP3.07□□□□□ -1.92
UBE3C-204ENST00000469336 MTORP42345 2549 aa3.07□□□□□ -1.92
UBE3C-204ENST00000469336 A0A096LNI7 61 aa3.07□□□□□ -1.92
UBE3C-204ENST00000469336 SPINK7P58062 85 aa3.07□□□□□ -1.92
UBE3C-204ENST00000469336 LINC00313P59037 77 aa3.07□□□□□ -1.92
UBE3C-204ENST00000469336 PCOTHQ58A44 107 aa3.07□□□□□ -1.92
UBE3C-204ENST00000469336 DMAC1Q96GE9 116 aa3.07□□□□□ -1.92
UBE3C-204ENST00000469336 HECTD1Q9ULT8 2610 aa3.07□□□□□ -1.92
UBE3C-204ENST00000469336 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
UBE3C-204ENST00000469336 IGHV6-1A0A0B4J1U7 121 aa3.05□□□□□ -1.92
UBE3C-204ENST00000469336 A0A1W2PNN7 141 aa3.05□□□□□ -1.92
UBE3C-204ENST00000469336 UQCR11O14957 56 aa3.05□□□□□ -1.92
UBE3C-204ENST00000469336 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
UBE3C-204ENST00000469336 RETNLBQ9BQ08 111 aa3.05□□□□□ -1.92
UBE3C-204ENST00000469336 A0A1B0GU69 56 aa3.04□□□□□ -1.92
UBE3C-204ENST00000469336 FBN3Q75N90 2809 aa3.04□□□□□ -1.92
UBE3C-204ENST00000469336 HIVEP1P15822 2718 aa3.04□□□□□ -1.92
UBE3C-204ENST00000469336 DNAH1Q9P2D7 4330 aa3.03□□□□□ -1.92
UBE3C-204ENST00000469336 A0A0G2JQZ4 141 aa3.03□□□□□ -1.92
UBE3C-204ENST00000469336 MIR22HGQ0VDD5 57 aa3.02□□□□□ -1.93
UBE3C-204ENST00000469336 CSMD2Q7Z408 3487 aa3.01□□□□□ -1.93
UBE3C-204ENST00000469336 ALMS1Q8TCU4 4167 aa3□□□□□ -1.93
UBE3C-204ENST00000469336 ACANP16112 2415 aa3□□□□□ -1.93
UBE3C-204ENST00000469336 VWFP04275 2813 aa2.99□□□□□ -1.93
UBE3C-204ENST00000469336 SSBP3-AS1Q7Z2R9 100 aa2.99□□□□□ -1.93
UBE3C-204ENST00000469336 ZNF469Q96JG9 3925 aaPredicted RBP2.99□□□□□ -1.93
UBE3C-204ENST00000469336 CIRBP-AS1Q8TBR5 109 aa2.98□□□□□ -1.93
UBE3C-204ENST00000469336 SPACA4Q8TDM5 124 aa2.98□□□□□ -1.93
UBE3C-204ENST00000469336 F8P00451 2351 aa2.98□□□□□ -1.93
UBE3C-204ENST00000469336 PDZD2O15018 2839 aa2.98□□□□□ -1.93
UBE3C-204ENST00000469336 NSD1Q96L73 2696 aaPredicted RBP2.97□□□□□ -1.93
UBE3C-204ENST00000469336 DNAH3Q8TD57 4116 aa2.96□□□□□ -1.94
UBE3C-204ENST00000469336 IGLV7-43P04211 117 aa2.96□□□□□ -1.94
UBE3C-204ENST00000469336 UBE2DNLQ8IWF7 75 aa2.95□□□□□ -1.94
UBE3C-204ENST00000469336 ATRQ13535 2644 aa2.94□□□□□ -1.94
UBE3C-204ENST00000469336 TENM2Q9NT68 2774 aa2.94□□□□□ -1.94
UBE3C-204ENST00000469336 LY6G6CO95867 125 aa2.94□□□□□ -1.94
UBE3C-204ENST00000469336 KRTAP13-2Q52LG2 175 aa2.94□□□□□ -1.94
UBE3C-204ENST00000469336 TENM4Q6N022 2769 aa2.94□□□□□ -1.94
UBE3C-204ENST00000469336 SMR3AQ99954 134 aa2.93□□□□□ -1.94
UBE3C-204ENST00000469336 APLNQ9ULZ1 77 aa2.93□□□□□ -1.94
UBE3C-204ENST00000469336 NBDYA0A0U1RRE5 68 aa2.92□□□□□ -1.94
UBE3C-204ENST00000469336 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
UBE3C-204ENST00000469336 Q6ZRN7 208 aaPredicted RBP2.92□□□□□ -1.94
UBE3C-204ENST00000469336 TENM3Q9P273 2699 aa2.92□□□□□ -1.94
UBE3C-204ENST00000469336 TENM1Q9UKZ4 2725 aa2.91□□□□□ -1.94
UBE3C-204ENST00000469336 CSAG1Q6PB30 78 aa2.91□□□□□ -1.94
UBE3C-204ENST00000469336 ADM2Q7Z4H4 148 aa2.91□□□□□ -1.94
UBE3C-204ENST00000469336 PSORS1C2Q9UIG4 136 aa2.91□□□□□ -1.94
UBE3C-204ENST00000469336 ITPR2Q14571 2701 aa2.91□□□□□ -1.94
UBE3C-204ENST00000469336 CUBNO60494 3623 aa2.9□□□□□ -1.94
UBE3C-204ENST00000469336 DYNC2H1Q8NCM8 4307 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms