RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 BAALC-AS2P0C853 105 aa10.93□□□□□ -0.66
TTC28-204ENST00000468807 C9JAW5 83 aa10.92□□□□□ -0.66
TTC28-204ENST00000468807 HRES1P13985 223 aa10.91□□□□□ -0.66
TTC28-204ENST00000468807 SSPOA2VEC9 5147 aa10.88□□□□□ -0.67
TTC28-204ENST00000468807 J3KT08 172 aa10.87□□□□□ -0.67
TTC28-204ENST00000468807 MPLKIPQ8TAP9 179 aa10.87□□□□□ -0.67
TTC28-204ENST00000468807 C21orf62-AS1Q17RA5 79 aa10.86□□□□□ -0.67
TTC28-204ENST00000468807 Q6ZQT0 140 aa10.84□□□□□ -0.67
TTC28-204ENST00000468807 NAA38Q9BRA0 125 aaKnown RBP10.84□□□□□ -0.67
TTC28-204ENST00000468807 ZCCHC13Q8WW36 166 aaKnown RBP10.83□□□□□ -0.68
TTC28-204ENST00000468807 NDUFB1O75438 58 aa10.82□□□□□ -0.68
TTC28-204ENST00000468807 ATXN8Q156A1 80 aa10.82□□□□□ -0.68
TTC28-204ENST00000468807 MT2AP02795 61 aa10.81□□□□□ -0.68
TTC28-204ENST00000468807 M0R143 59 aa10.8□□□□□ -0.68
TTC28-204ENST00000468807 JMJD7-PLA2G4BH0Y9G9 81 aa10.78□□□□□ -0.68
TTC28-204ENST00000468807 MTURNQ8N3F0 131 aa10.78□□□□□ -0.68
TTC28-204ENST00000468807 SPINK7P58062 85 aa10.77□□□□□ -0.69
TTC28-204ENST00000468807 LYRM7Q5U5X0 104 aa10.77□□□□□ -0.69
TTC28-204ENST00000468807 MT1FP04733 61 aa10.74□□□□□ -0.69
TTC28-204ENST00000468807 A8MWP4 228 aa10.73□□□□□ -0.69
TTC28-204ENST00000468807 C8orf17Q9NRJ1 99 aa10.73□□□□□ -0.69
TTC28-204ENST00000468807 LOC110117498A0A087WWA1 95 aa10.72□□□□□ -0.69
TTC28-204ENST00000468807 KRTAP10-10P60014 251 aa10.72□□□□□ -0.69
TTC28-204ENST00000468807 Q8N9P0 234 aaPredicted RBP10.72□□□□□ -0.69
TTC28-204ENST00000468807 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
TTC28-204ENST00000468807 IGKV3D-7A0A0C4DH55 119 aa10.69□□□□□ -0.7
TTC28-204ENST00000468807 A0A1B0GW54 56 aa10.69□□□□□ -0.7
TTC28-204ENST00000468807 PDE6GP18545 87 aa10.69□□□□□ -0.7
TTC28-204ENST00000468807 Q6ZVQ6 151 aa10.65□□□□□ -0.7
TTC28-204ENST00000468807 WFDC13Q8IUB5 93 aa10.65□□□□□ -0.7
TTC28-204ENST00000468807 NREPQ16612 68 aa10.64□□□□□ -0.71
TTC28-204ENST00000468807 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.62□□□□□ -0.71
TTC28-204ENST00000468807 BATFQ16520 125 aa10.62□□□□□ -0.71
TTC28-204ENST00000468807 LCE2BO14633 110 aa10.61□□□□□ -0.71
TTC28-204ENST00000468807 KRTAP9-3Q9BYQ3 159 aa10.61□□□□□ -0.71
TTC28-204ENST00000468807 FCGBPQ9Y6R7 5405 aaPredicted RBP10.61□□□□□ -0.71
TTC28-204ENST00000468807 PRR15Q8IV56 129 aa10.6□□□□□ -0.71
TTC28-204ENST00000468807 SMIM6P0DI80 62 aa10.58□□□□□ -0.72
TTC28-204ENST00000468807 MMP24-AS1A0A0U1RRL7 71 aa10.54□□□□□ -0.72
TTC28-204ENST00000468807 MRPL34Q9BQ48 92 aaKnown RBP10.54□□□□□ -0.72
TTC28-204ENST00000468807 KRTAP9-7A8MTY7 169 aa10.53□□□□□ -0.72
TTC28-204ENST00000468807 KRTAP19-1Q8IUB9 90 aa10.53□□□□□ -0.72
TTC28-204ENST00000468807 TMEM254Q8TBM7 123 aa10.53□□□□□ -0.72
TTC28-204ENST00000468807 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
TTC28-204ENST00000468807 NDUFS5O43920 106 aa10.52□□□□□ -0.73
TTC28-204ENST00000468807 K7EQZ3 153 aa10.5□□□□□ -0.73
TTC28-204ENST00000468807 hDV103S1A0JD37 113 aa10.49□□□□□ -0.73
TTC28-204ENST00000468807 H3BT86 120 aa10.46□□□□□ -0.73
TTC28-204ENST00000468807 C9orf118A6NHY6 69 aa10.44□□□□□ -0.74
TTC28-204ENST00000468807 BPY2O14599 106 aa10.43□□□□□ -0.74
TTC28-204ENST00000468807 A0A1W2PPM0 123 aa10.42□□□□□ -0.74
TTC28-204ENST00000468807 IGKV2D-30A0A075B6S6 120 aa10.4□□□□□ -0.74
TTC28-204ENST00000468807 IGKV2-30P06310 120 aa10.4□□□□□ -0.74
TTC28-204ENST00000468807 SYNE2Q8WXH0 6885 aaKnown RBP10.39□□□□□ -0.75
TTC28-204ENST00000468807 TAX1BP3O14907 124 aa10.39□□□□□ -0.75
TTC28-204ENST00000468807 H1FX-AS1Q4G0G2 97 aa10.39□□□□□ -0.75
TTC28-204ENST00000468807 MACF1Q9UPN3 7388 aaKnown RBP10.38□□□□□ -0.75
TTC28-204ENST00000468807 Q8N9L7 120 aa10.34□□□□□ -0.75
TTC28-204ENST00000468807 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
TTC28-204ENST00000468807 LINC00846Q9NV44 126 aa10.33□□□□□ -0.76
TTC28-204ENST00000468807 Q5W150 140 aa10.32□□□□□ -0.76
TTC28-204ENST00000468807 CASC2Q6XLA1 102 aa10.31□□□□□ -0.76
TTC28-204ENST00000468807 HCG22E2RYF7 251 aa10.29□□□□□ -0.76
TTC28-204ENST00000468807 SPCS1Q9Y6A9 102 aa10.28□□□□□ -0.76
TTC28-204ENST00000468807 KRTAP19-6Q3LI70 58 aa10.24□□□□□ -0.77
TTC28-204ENST00000468807 LOC105371267A0A1B0GV96 52 aa10.23□□□□□ -0.77
TTC28-204ENST00000468807 C4orf26Q17RF5 130 aa10.21□□□□□ -0.77
TTC28-204ENST00000468807 SMCPP49901 116 aaPredicted RBP10.19□□□□□ -0.78
TTC28-204ENST00000468807 CXCL6P80162 114 aa10.19□□□□□ -0.78
TTC28-204ENST00000468807 UBL5Q9BZL1 73 aa10.17□□□□□ -0.78
TTC28-204ENST00000468807 C5orf47Q569G3 176 aa10.09□□□□□ -0.79
TTC28-204ENST00000468807 COL5A1-AS1Q5SY13 56 aa10.08□□□□□ -0.8
TTC28-204ENST00000468807 PRO0461Q9UI25 63 aa10.07□□□□□ -0.8
TTC28-204ENST00000468807 K7EP34 96 aa10.05□□□□□ -0.8
TTC28-204ENST00000468807 FAM236AA0A1B0GUQ0 79 aa10.04□□□□□ -0.8
TTC28-204ENST00000468807 FAM236BA0A1B0GV22 79 aa10.04□□□□□ -0.8
TTC28-204ENST00000468807 S4R3F8 94 aa10.02□□□□□ -0.81
TTC28-204ENST00000468807 C1orf64Q8NEQ6 169 aa9.99□□□□□ -0.81
TTC28-204ENST00000468807 KRTAP3-1Q9BYR8 98 aa9.99□□□□□ -0.81
TTC28-204ENST00000468807 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
TTC28-204ENST00000468807 TP53AIP1Q9HCN2 124 aa9.94□□□□□ -0.82
TTC28-204ENST00000468807 LCA10Q71F78 164 aa9.93□□□□□ -0.82
TTC28-204ENST00000468807 GTF2H5Q6ZYL4 71 aa9.91□□□□□ -0.82
TTC28-204ENST00000468807 KRTAP6-3Q3LI67 103 aa9.85□□□□□ -0.83
TTC28-204ENST00000468807 ETDBQ3ZM63 59 aa9.85□□□□□ -0.83
TTC28-204ENST00000468807 F8W1H4 67 aa9.84□□□□□ -0.83
TTC28-204ENST00000468807 Q5VV11 94 aa9.83□□□□□ -0.84
TTC28-204ENST00000468807 A6NN06 94 aa9.8□□□□□ -0.84
TTC28-204ENST00000468807 MT1BP07438 61 aa9.78□□□□□ -0.84
TTC28-204ENST00000468807 SPRR2GQ9BYE4 73 aa9.77□□□□□ -0.85
TTC28-204ENST00000468807 CYP4F30PQ9H0H9 118 aa9.77□□□□□ -0.85
TTC28-204ENST00000468807 PCP4L1A6NKN8 68 aa9.75□□□□□ -0.85
TTC28-204ENST00000468807 KLKP1Q107X0 134 aa9.74□□□□□ -0.85
TTC28-204ENST00000468807 TRAV22A0A0B4J277 110 aa9.73□□□□□ -0.85
TTC28-204ENST00000468807 KRTAP19-8Q3LI54 63 aa9.73□□□□□ -0.85
TTC28-204ENST00000468807 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
TTC28-204ENST00000468807 NEBP20929 6669 aa9.71□□□□□ -0.86
TTC28-204ENST00000468807 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
TTC28-204ENST00000468807 A0A087WVE0 104 aa9.68□□□□□ -0.86
TTC28-204ENST00000468807 MUC12Q9UKN1 5478 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms