RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TRBV7-4A0A0J9YYF1 115 aa5.92□□□□□ -1.46
COL4A6-205ENST00000468338 ANKRD29Q8N6D5 301 aa5.91□□□□□ -1.46
COL4A6-205ENST00000468338 M0R143 59 aa5.9□□□□□ -1.46
COL4A6-205ENST00000468338 SCGB1C2P0DMR2 95 aa5.9□□□□□ -1.46
COL4A6-205ENST00000468338 OBSCN-AS1Q96MR7 158 aa5.9□□□□□ -1.46
COL4A6-205ENST00000468338 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
COL4A6-205ENST00000468338 PCP4L1A6NKN8 68 aa5.88□□□□□ -1.47
COL4A6-205ENST00000468338 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
COL4A6-205ENST00000468338 CCKP06307 115 aa5.86□□□□□ -1.47
COL4A6-205ENST00000468338 LINC00472Q9H8W2 130 aa5.86□□□□□ -1.47
COL4A6-205ENST00000468338 A0A1B0GV72 72 aa5.85□□□□□ -1.47
COL4A6-205ENST00000468338 LOC105371267A0A1B0GV96 52 aa5.85□□□□□ -1.47
COL4A6-205ENST00000468338 A8MUU9 505 aa5.85□□□□□ -1.47
COL4A6-205ENST00000468338 BAALC-AS2P0C853 105 aa5.85□□□□□ -1.47
COL4A6-205ENST00000468338 RBM3P98179 157 aaKnown RBP5.85□□□□□ -1.47
COL4A6-205ENST00000468338 OCR1Q9BZK8 76 aa5.84□□□□□ -1.47
COL4A6-205ENST00000468338 MT1HP80294 61 aa5.83□□□□□ -1.48
COL4A6-205ENST00000468338 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
COL4A6-205ENST00000468338 TSTD3H0UI37 97 aa5.82□□□□□ -1.48
COL4A6-205ENST00000468338 ATXN8Q156A1 80 aa5.82□□□□□ -1.48
COL4A6-205ENST00000468338 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
COL4A6-205ENST00000468338 NAA38Q9BRA0 125 aaKnown RBP5.82□□□□□ -1.48
COL4A6-205ENST00000468338 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
COL4A6-205ENST00000468338 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
COL4A6-205ENST00000468338 DSCR10P59022 87 aa5.8□□□□□ -1.48
COL4A6-205ENST00000468338 SIGMAR1Q99720 223 aa5.8□□□□□ -1.48
COL4A6-205ENST00000468338 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
COL4A6-205ENST00000468338 C9JAW5 83 aa5.79□□□□□ -1.48
COL4A6-205ENST00000468338 TRBV20-1A0A075B6N2 111 aa5.78□□□□□ -1.48
COL4A6-205ENST00000468338 JMJD7-PLA2G4BH0Y9G9 81 aa5.78□□□□□ -1.48
COL4A6-205ENST00000468338 LINC00313P59037 77 aa5.78□□□□□ -1.48
COL4A6-205ENST00000468338 DEFB116Q30KQ4 102 aa5.78□□□□□ -1.48
COL4A6-205ENST00000468338 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
COL4A6-205ENST00000468338 A0A1B0GW54 56 aa5.77□□□□□ -1.49
COL4A6-205ENST00000468338 LYRM7Q5U5X0 104 aa5.77□□□□□ -1.49
COL4A6-205ENST00000468338 Q6ZQT0 140 aa5.77□□□□□ -1.49
COL4A6-205ENST00000468338 VPS25Q9BRG1 176 aa5.77□□□□□ -1.49
COL4A6-205ENST00000468338 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
COL4A6-205ENST00000468338 PDE6GP18545 87 aa5.75□□□□□ -1.49
COL4A6-205ENST00000468338 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
COL4A6-205ENST00000468338 TAX1BP3O14907 124 aa5.74□□□□□ -1.49
COL4A6-205ENST00000468338 BATFQ16520 125 aa5.74□□□□□ -1.49
COL4A6-205ENST00000468338 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
COL4A6-205ENST00000468338 J3KT08 172 aa5.73□□□□□ -1.49
COL4A6-205ENST00000468338 IGHV6-1A0A0B4J1U7 121 aa5.72□□□□□ -1.49
COL4A6-205ENST00000468338 C8orf87E5RJ46 101 aa5.72□□□□□ -1.49
COL4A6-205ENST00000468338 COX6B2Q6YFQ2 88 aa5.72□□□□□ -1.49
COL4A6-205ENST00000468338 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.5
COL4A6-205ENST00000468338 A0A1W2PPM0 123 aa5.7□□□□□ -1.5
COL4A6-205ENST00000468338 MTURNQ8N3F0 131 aa5.7□□□□□ -1.5
COL4A6-205ENST00000468338 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
COL4A6-205ENST00000468338 C14orf132Q9NPU4 83 aa5.7□□□□□ -1.5
COL4A6-205ENST00000468338 H3BT86 120 aa5.69□□□□□ -1.5
COL4A6-205ENST00000468338 NDUFAF8A1L188 74 aa5.68□□□□□ -1.5
COL4A6-205ENST00000468338 SEC61GP60059 68 aa5.67□□□□□ -1.5
COL4A6-205ENST00000468338 A8MWP4 228 aa5.66□□□□□ -1.5
COL4A6-205ENST00000468338 NDUFB1O75438 58 aa5.66□□□□□ -1.5
COL4A6-205ENST00000468338 IGKV3D-7A0A0C4DH55 119 aa5.65□□□□□ -1.5
COL4A6-205ENST00000468338 M0R2T5 61 aa5.65□□□□□ -1.5
COL4A6-205ENST00000468338 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
COL4A6-205ENST00000468338 HRES1P13985 223 aa5.63□□□□□ -1.51
COL4A6-205ENST00000468338 NREPQ16612 68 aa5.63□□□□□ -1.51
COL4A6-205ENST00000468338 PRR15Q8IV56 129 aa5.62□□□□□ -1.51
COL4A6-205ENST00000468338 ZCCHC13Q8WW36 166 aaKnown RBP5.62□□□□□ -1.51
COL4A6-205ENST00000468338 SPCS1Q9Y6A9 102 aa5.62□□□□□ -1.51
COL4A6-205ENST00000468338 COL5A1-AS1Q5SY13 56 aa5.6□□□□□ -1.51
COL4A6-205ENST00000468338 PRO0461Q9UI25 63 aa5.58□□□□□ -1.52
COL4A6-205ENST00000468338 MMP24-AS1A0A0U1RRL7 71 aa5.57□□□□□ -1.52
COL4A6-205ENST00000468338 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
COL4A6-205ENST00000468338 SPINK7P58062 85 aa5.56□□□□□ -1.52
COL4A6-205ENST00000468338 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
COL4A6-205ENST00000468338 K7EP34 96 aa5.55□□□□□ -1.52
COL4A6-205ENST00000468338 TMEM254Q8TBM7 123 aa5.55□□□□□ -1.52
COL4A6-205ENST00000468338 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
COL4A6-205ENST00000468338 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
COL4A6-205ENST00000468338 K7EQZ3 153 aa5.54□□□□□ -1.52
COL4A6-205ENST00000468338 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
COL4A6-205ENST00000468338 FAM236DA0A1B0GTK5 79 aa5.53□□□□□ -1.52
COL4A6-205ENST00000468338 BPY2O14599 106 aa5.53□□□□□ -1.52
COL4A6-205ENST00000468338 FAM236CP0DP71 79 aa5.53□□□□□ -1.52
COL4A6-205ENST00000468338 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
COL4A6-205ENST00000468338 CRCT1Q9UGL9 99 aa5.52□□□□□ -1.53
COL4A6-205ENST00000468338 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
COL4A6-205ENST00000468338 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
COL4A6-205ENST00000468338 LINC00846Q9NV44 126 aa5.49□□□□□ -1.53
COL4A6-205ENST00000468338 MT3P25713 68 aa5.47□□□□□ -1.53
COL4A6-205ENST00000468338 GTF2H5Q6ZYL4 71 aa5.47□□□□□ -1.53
COL4A6-205ENST00000468338 Q8N9L7 120 aa5.47□□□□□ -1.53
COL4A6-205ENST00000468338 WFDC13Q8IUB5 93 aa5.46□□□□□ -1.54
COL4A6-205ENST00000468338 F8W1H4 67 aa5.45□□□□□ -1.54
COL4A6-205ENST00000468338 MT2AP02795 61 aa5.45□□□□□ -1.54
COL4A6-205ENST00000468338 CXCL6P80162 114 aa5.45□□□□□ -1.54
COL4A6-205ENST00000468338 Q5W150 140 aa5.45□□□□□ -1.54
COL4A6-205ENST00000468338 UBL5Q9BZL1 73 aa5.45□□□□□ -1.54
COL4A6-205ENST00000468338 CASC2Q6XLA1 102 aa5.44□□□□□ -1.54
COL4A6-205ENST00000468338 NDUFS5O43920 106 aa5.43□□□□□ -1.54
COL4A6-205ENST00000468338 MT1FP04733 61 aa5.41□□□□□ -1.54
COL4A6-205ENST00000468338 ETDBQ3ZM63 59 aa5.41□□□□□ -1.54
COL4A6-205ENST00000468338 HCG22E2RYF7 251 aa5.4□□□□□ -1.54
COL4A6-205ENST00000468338 C7orf65Q6ZTY9 151 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms