RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 A0A087X002 238 aa5.29□□□□□ -1.56
TMEM254-209ENST00000467529 KRTAP13-2Q52LG2 175 aa5.29□□□□□ -1.56
TMEM254-209ENST00000467529 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
TMEM254-209ENST00000467529 KRTAP1-4P0C5Y4 121 aa5.29□□□□□ -1.56
TMEM254-209ENST00000467529 FAM229BQ4G0N7 80 aa5.29□□□□□ -1.56
TMEM254-209ENST00000467529 PRR15Q8IV56 129 aa5.29□□□□□ -1.56
TMEM254-209ENST00000467529 Q96NJ1 140 aa5.29□□□□□ -1.56
TMEM254-209ENST00000467529 VPS13BQ7Z7G8 4022 aa5.28□□□□□ -1.56
TMEM254-209ENST00000467529 Q75L30 129 aa5.27□□□□□ -1.57
TMEM254-209ENST00000467529 APOBP04114 4563 aaKnown RBP5.27□□□□□ -1.57
TMEM254-209ENST00000467529 A8MWP4 228 aa5.27□□□□□ -1.57
TMEM254-209ENST00000467529 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
TMEM254-209ENST00000467529 SPINK6Q6UWN8 80 aa5.25□□□□□ -1.57
TMEM254-209ENST00000467529 BRK1Q8WUW1 75 aa5.25□□□□□ -1.57
TMEM254-209ENST00000467529 ZCCHC13Q8WW36 166 aaKnown RBP5.24□□□□□ -1.57
TMEM254-209ENST00000467529 WFDC13Q8IUB5 93 aa5.24□□□□□ -1.57
TMEM254-209ENST00000467529 NDUFB1O75438 58 aa5.23□□□□□ -1.57
TMEM254-209ENST00000467529 KRTAP10-4P60372 401 aaPredicted RBP5.23□□□□□ -1.57
TMEM254-209ENST00000467529 KRTAP29-1A8MX34 341 aaPredicted RBP5.22□□□□□ -1.57
TMEM254-209ENST00000467529 RYR3Q15413 4870 aa5.22□□□□□ -1.57
TMEM254-209ENST00000467529 H3BPC8 53 aa5.22□□□□□ -1.57
TMEM254-209ENST00000467529 MP68P56378 58 aa5.22□□□□□ -1.57
TMEM254-209ENST00000467529 MMP24-AS1A0A0U1RRL7 71 aa5.21□□□□□ -1.58
TMEM254-209ENST00000467529 CASC2Q6XLA1 102 aa5.21□□□□□ -1.58
TMEM254-209ENST00000467529 FAT1Q14517 4588 aa5.21□□□□□ -1.58
TMEM254-209ENST00000467529 ASB16-AS1Q495Z4 193 aa5.2□□□□□ -1.58
TMEM254-209ENST00000467529 TYMSOSQ8TAI1 123 aa5.2□□□□□ -1.58
TMEM254-209ENST00000467529 A0A1B0GVX0 72 aa5.2□□□□□ -1.58
TMEM254-209ENST00000467529 CDK2AP2O75956 126 aa5.2□□□□□ -1.58
TMEM254-209ENST00000467529 IGHV6-1A0A0B4J1U7 121 aa5.18□□□□□ -1.58
TMEM254-209ENST00000467529 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
TMEM254-209ENST00000467529 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
TMEM254-209ENST00000467529 hDV103S1A0JD37 113 aa5.17□□□□□ -1.58
TMEM254-209ENST00000467529 FP248Q71RG6 208 aaPredicted RBP5.16□□□□□ -1.58
TMEM254-209ENST00000467529 CYP4F30PQ9H0H9 118 aa5.16□□□□□ -1.58
TMEM254-209ENST00000467529 NOTCH2NLQ7Z3S9 236 aa5.16□□□□□ -1.58
TMEM254-209ENST00000467529 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
TMEM254-209ENST00000467529 TRAV22A0A0B4J277 110 aa5.15□□□□□ -1.58
TMEM254-209ENST00000467529 H0Y9P7 68 aa5.15□□□□□ -1.59
TMEM254-209ENST00000467529 NDUFS5O43920 106 aa5.15□□□□□ -1.59
TMEM254-209ENST00000467529 TP53AIP1Q9HCN2 124 aa5.15□□□□□ -1.59
TMEM254-209ENST00000467529 FAM229AH3BQW9 127 aa5.14□□□□□ -1.59
TMEM254-209ENST00000467529 SPINK1P00995 79 aa5.14□□□□□ -1.59
TMEM254-209ENST00000467529 SPANXA2-OT1Q8N9U9 137 aa5.14□□□□□ -1.59
TMEM254-209ENST00000467529 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
TMEM254-209ENST00000467529 LINC00208Q96KT6 92 aa5.13□□□□□ -1.59
TMEM254-209ENST00000467529 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
TMEM254-209ENST00000467529 C1orf64Q8NEQ6 169 aa5.11□□□□□ -1.59
TMEM254-209ENST00000467529 MRPL34Q9BQ48 92 aaKnown RBP5.11□□□□□ -1.59
TMEM254-209ENST00000467529 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
TMEM254-209ENST00000467529 Q5VSD8 79 aa5.11□□□□□ -1.59
TMEM254-209ENST00000467529 A8MUN3 132 aa5.1□□□□□ -1.59
TMEM254-209ENST00000467529 RPS29P62273 56 aaKnown RBP5.1□□□□□ -1.59
TMEM254-209ENST00000467529 HSPG2P98160 4391 aa5.1□□□□□ -1.59
TMEM254-209ENST00000467529 RYR1P21817 5038 aa5.1□□□□□ -1.59
TMEM254-209ENST00000467529 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.6
TMEM254-209ENST00000467529 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.6
TMEM254-209ENST00000467529 LINC00313P59037 77 aa5.08□□□□□ -1.6
TMEM254-209ENST00000467529 Q1T7F1 81 aa5.07□□□□□ -1.6
TMEM254-209ENST00000467529 LCA10Q71F78 164 aa5.07□□□□□ -1.6
TMEM254-209ENST00000467529 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
TMEM254-209ENST00000467529 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
TMEM254-209ENST00000467529 MPLKIPQ8TAP9 179 aa5.06□□□□□ -1.6
TMEM254-209ENST00000467529 IGLV7-46A0A075B6I9 117 aa5.04□□□□□ -1.6
TMEM254-209ENST00000467529 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
TMEM254-209ENST00000467529 PRR4Q16378 134 aa5.04□□□□□ -1.6
TMEM254-209ENST00000467529 KIAA1109Q2LD37 5005 aa5.04□□□□□ -1.6
TMEM254-209ENST00000467529 EPPK1P58107 5090 aaKnown RBP5.03□□□□□ -1.6
TMEM254-209ENST00000467529 Q8N9P0 234 aaPredicted RBP5.03□□□□□ -1.6
TMEM254-209ENST00000467529 KRTAP10-8P60410 259 aa5.02□□□□□ -1.61
TMEM254-209ENST00000467529 Q5W150 140 aa5.02□□□□□ -1.61
TMEM254-209ENST00000467529 Q8N1X5 172 aa5.02□□□□□ -1.61
TMEM254-209ENST00000467529 LRP1Q07954 4544 aaKnown RBP5.01□□□□□ -1.61
TMEM254-209ENST00000467529 PSPHP1O15172 72 aa5□□□□□ -1.61
TMEM254-209ENST00000467529 KRTAP13-3Q3SY46 172 aa5□□□□□ -1.61
TMEM254-209ENST00000467529 LOC101927531A0A1B0GV80 90 aa5□□□□□ -1.61
TMEM254-209ENST00000467529 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
TMEM254-209ENST00000467529 FAT3Q8TDW7 4589 aa4.99□□□□□ -1.61
TMEM254-209ENST00000467529 TNXBP22105 4242 aa4.98□□□□□ -1.61
TMEM254-209ENST00000467529 PCOTHQ58A44 107 aa4.96□□□□□ -1.61
TMEM254-209ENST00000467529 COA5Q86WW8 74 aa4.96□□□□□ -1.61
TMEM254-209ENST00000467529 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
TMEM254-209ENST00000467529 FLG2Q5D862 2391 aaPredicted RBP4.95□□□□□ -1.62
TMEM254-209ENST00000467529 C7orf65Q6ZTY9 151 aa4.94□□□□□ -1.62
TMEM254-209ENST00000467529 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
TMEM254-209ENST00000467529 LINC01554Q52M75 96 aa4.92□□□□□ -1.62
TMEM254-209ENST00000467529 IGKV2-30P06310 120 aa4.91□□□□□ -1.62
TMEM254-209ENST00000467529 A8MUU9 505 aa4.9□□□□□ -1.63
TMEM254-209ENST00000467529 C20orf166-AS1Q96NR2 134 aa4.9□□□□□ -1.63
TMEM254-209ENST00000467529 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
TMEM254-209ENST00000467529 Q5VV11 94 aa4.89□□□□□ -1.63
TMEM254-209ENST00000467529 HRES1P13985 223 aa4.89□□□□□ -1.63
TMEM254-209ENST00000467529 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
TMEM254-209ENST00000467529 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
TMEM254-209ENST00000467529 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
TMEM254-209ENST00000467529 ACYP2P14621 99 aa4.87□□□□□ -1.63
TMEM254-209ENST00000467529 IGKV2D-30A0A075B6S6 120 aa4.87□□□□□ -1.63
TMEM254-209ENST00000467529 ATP11AUNQ6ZP68 121 aa4.86□□□□□ -1.63
TMEM254-209ENST00000467529 A6NN06 94 aa4.85□□□□□ -1.63
TMEM254-209ENST00000467529 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms