RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 IGLV7-46A0A075B6I9 117 aa12.66□□□□□ -0.38
LINC01140-202ENST00000467438 DNAH6Q9C0G6 4158 aa12.66□□□□□ -0.38
LINC01140-202ENST00000467438 MEGF8Q7Z7M0 2845 aa12.66□□□□□ -0.38
LINC01140-202ENST00000467438 SPINK6Q6UWN8 80 aa12.65□□□□□ -0.38
LINC01140-202ENST00000467438 ZNF706Q9Y5V0 76 aaPredicted RBP12.65□□□□□ -0.38
LINC01140-202ENST00000467438 PLAC8Q9NZF1 115 aa12.64□□□□□ -0.39
LINC01140-202ENST00000467438 ALMS1Q8TCU4 4167 aa12.63□□□□□ -0.39
LINC01140-202ENST00000467438 TP53AIP1Q9HCN2 124 aa12.63□□□□□ -0.39
LINC01140-202ENST00000467438 CDK2AP2O75956 126 aa12.62□□□□□ -0.39
LINC01140-202ENST00000467438 Q6ZR54 194 aa12.62□□□□□ -0.39
LINC01140-202ENST00000467438 MRPL34Q9BQ48 92 aaKnown RBP12.61□□□□□ -0.39
LINC01140-202ENST00000467438 PRR15LQ9BU68 103 aa12.61□□□□□ -0.39
LINC01140-202ENST00000467438 CIRBP-AS1Q8TBR5 109 aa12.57□□□□□ -0.4
LINC01140-202ENST00000467438 DNAH11Q96DT5 4516 aa12.57□□□□□ -0.4
LINC01140-202ENST00000467438 CHKB-CPT1BH3BT56 60 aa12.56□□□□□ -0.4
LINC01140-202ENST00000467438 Q5W150 140 aa12.54□□□□□ -0.4
LINC01140-202ENST00000467438 IGLV7-43P04211 117 aa12.52□□□□□ -0.4
LINC01140-202ENST00000467438 LIMD2Q9BT23 127 aa12.52□□□□□ -0.4
LINC01140-202ENST00000467438 DNAH5Q8TE73 4624 aa12.51□□□□□ -0.41
LINC01140-202ENST00000467438 SPAG11AQ6PDA7 123 aa12.5□□□□□ -0.41
LINC01140-202ENST00000467438 DNHD1Q96M86 4753 aa12.49□□□□□ -0.41
LINC01140-202ENST00000467438 C1orf134Q5TEV5 83 aa12.49□□□□□ -0.41
LINC01140-202ENST00000467438 HRES1P13985 223 aa12.48□□□□□ -0.41
LINC01140-202ENST00000467438 LY6G6CO95867 125 aa12.44□□□□□ -0.42
LINC01140-202ENST00000467438 KRTAP10-2P60368 255 aa12.43□□□□□ -0.42
LINC01140-202ENST00000467438 KRTAP13-3Q3SY46 172 aa12.41□□□□□ -0.42
LINC01140-202ENST00000467438 LCA10Q71F78 164 aa12.41□□□□□ -0.42
LINC01140-202ENST00000467438 LRP1BQ9NZR2 4599 aa12.4□□□□□ -0.42
LINC01140-202ENST00000467438 LOC101927531A0A1B0GV80 90 aa12.4□□□□□ -0.43
LINC01140-202ENST00000467438 RETNLBQ9BQ08 111 aa12.4□□□□□ -0.43
LINC01140-202ENST00000467438 Q75L30 129 aa12.38□□□□□ -0.43
LINC01140-202ENST00000467438 A6NED7 52 aa12.38□□□□□ -0.43
LINC01140-202ENST00000467438 HYDINQ4G0P3 5121 aa12.35□□□□□ -0.43
LINC01140-202ENST00000467438 PRR26Q8N8Z3 221 aa12.35□□□□□ -0.43
LINC01140-202ENST00000467438 SPTSSBQ8NFR3 76 aa12.34□□□□□ -0.43
LINC01140-202ENST00000467438 LINC01558Q9Y6Z2 57 aa12.33□□□□□ -0.44
LINC01140-202ENST00000467438 KRTAP13-2Q52LG2 175 aa12.32□□□□□ -0.44
LINC01140-202ENST00000467438 PKD1P98161 4303 aa12.3□□□□□ -0.44
LINC01140-202ENST00000467438 SSBP3-AS1Q7Z2R9 100 aa12.29□□□□□ -0.44
LINC01140-202ENST00000467438 RBM12B-AS1Q9P1G2 102 aa12.28□□□□□ -0.44
LINC01140-202ENST00000467438 SPINK7P58062 85 aa12.27□□□□□ -0.45
LINC01140-202ENST00000467438 LINC00313P59037 77 aa12.26□□□□□ -0.45
LINC01140-202ENST00000467438 KRTAP10-1P60331 282 aa12.23□□□□□ -0.45
LINC01140-202ENST00000467438 FAT2Q9NYQ8 4349 aa12.23□□□□□ -0.45
LINC01140-202ENST00000467438 VPS13BQ7Z7G8 4022 aa12.22□□□□□ -0.45
LINC01140-202ENST00000467438 C8orf87E5RJ46 101 aa12.21□□□□□ -0.45
LINC01140-202ENST00000467438 H3BS24 57 aa12.18□□□□□ -0.46
LINC01140-202ENST00000467438 CDC42SE1Q9NRR8 79 aa12.18□□□□□ -0.46
LINC01140-202ENST00000467438 KTN1-AS1Q86SY8 53 aa12.16□□□□□ -0.46
LINC01140-202ENST00000467438 ACYP2P14621 99 aa12.14□□□□□ -0.47
LINC01140-202ENST00000467438 ATP11AUNQ6ZP68 121 aa12.14□□□□□ -0.47
LINC01140-202ENST00000467438 KRTAP16-1A8MUX0 517 aa12.13□□□□□ -0.47
LINC01140-202ENST00000467438 KRTAP1-4P0C5Y4 121 aa12.13□□□□□ -0.47
LINC01140-202ENST00000467438 FAM229AH3BQW9 127 aa12.12□□□□□ -0.47
LINC01140-202ENST00000467438 Q6ZSA8 131 aa12.12□□□□□ -0.47
LINC01140-202ENST00000467438 DMAC1Q96GE9 116 aa12.11□□□□□ -0.47
LINC01140-202ENST00000467438 IGKV2-30P06310 120 aa12.1□□□□□ -0.47
LINC01140-202ENST00000467438 A6NN06 94 aa12.07□□□□□ -0.48
LINC01140-202ENST00000467438 IGKV2D-30A0A075B6S6 120 aa12.04□□□□□ -0.48
LINC01140-202ENST00000467438 PKHD1P08F94 4074 aa12.02□□□□□ -0.49
LINC01140-202ENST00000467438 PLA2G1BP04054 148 aaKnown RBP12□□□□□ -0.49
LINC01140-202ENST00000467438 TYMSOSQ8TAI1 123 aa11.94□□□□□ -0.5
LINC01140-202ENST00000467438 A0A1B0GU69 56 aa11.91□□□□□ -0.5
LINC01140-202ENST00000467438 C7orf65Q6ZTY9 151 aa11.88□□□□□ -0.51
LINC01140-202ENST00000467438 SPINK1P00995 79 aa11.82□□□□□ -0.52
LINC01140-202ENST00000467438 Q8N1X5 172 aa11.81□□□□□ -0.52
LINC01140-202ENST00000467438 SMR3BP02814 79 aaPredicted RBP11.79□□□□□ -0.52
LINC01140-202ENST00000467438 SACSQ9NZJ4 4579 aa11.77□□□□□ -0.53
LINC01140-202ENST00000467438 FAT1Q14517 4588 aa11.76□□□□□ -0.53
LINC01140-202ENST00000467438 LINC00304Q8N9R0 145 aa11.75□□□□□ -0.53
LINC01140-202ENST00000467438 DYNC1H1Q14204 4646 aaKnown RBP11.74□□□□□ -0.53
LINC01140-202ENST00000467438 C9orf92A6NGG3 77 aa11.71□□□□□ -0.53
LINC01140-202ENST00000467438 SPATA8Q6RVD6 105 aa11.7□□□□□ -0.54
LINC01140-202ENST00000467438 ADM2Q7Z4H4 148 aa11.69□□□□□ -0.54
LINC01140-202ENST00000467438 MIR22HGQ0VDD5 57 aa11.69□□□□□ -0.54
LINC01140-202ENST00000467438 PRAC1Q96KF2 57 aa11.68□□□□□ -0.54
LINC01140-202ENST00000467438 KRTAP21-3Q3LHN1 58 aa11.67□□□□□ -0.54
LINC01140-202ENST00000467438 UQCR11O14957 56 aa11.65□□□□□ -0.54
LINC01140-202ENST00000467438 APOBP04114 4563 aaKnown RBP11.58□□□□□ -0.56
LINC01140-202ENST00000467438 PKHD1L1Q86WI1 4243 aa11.57□□□□□ -0.56
LINC01140-202ENST00000467438 RPS29P62273 56 aaKnown RBP11.54□□□□□ -0.56
LINC01140-202ENST00000467438 KRTAP3-1Q9BYR8 98 aa11.52□□□□□ -0.57
LINC01140-202ENST00000467438 KRTAP10-4P60372 401 aaPredicted RBP11.49□□□□□ -0.57
LINC01140-202ENST00000467438 A8MUU9 505 aa11.48□□□□□ -0.57
LINC01140-202ENST00000467438 C20orf166-AS1Q96NR2 134 aa11.48□□□□□ -0.57
LINC01140-202ENST00000467438 LINC01554Q52M75 96 aa11.47□□□□□ -0.57
LINC01140-202ENST00000467438 A0A1B0GVY2 172 aa11.41□□□□□ -0.58
LINC01140-202ENST00000467438 H0YAA0 97 aa11.38□□□□□ -0.59
LINC01140-202ENST00000467438 LRP1Q07954 4544 aaKnown RBP11.35□□□□□ -0.59
LINC01140-202ENST00000467438 RYR2Q92736 4967 aa11.32□□□□□ -0.6
LINC01140-202ENST00000467438 KMT2CQ8NEZ4 4911 aaKnown RBP11.32□□□□□ -0.6
LINC01140-202ENST00000467438 FLG2Q5D862 2391 aaPredicted RBP11.29□□□□□ -0.6
LINC01140-202ENST00000467438 FAT3Q8TDW7 4589 aa11.27□□□□□ -0.61
LINC01140-202ENST00000467438 CSAG1Q6PB30 78 aa11.26□□□□□ -0.61
LINC01140-202ENST00000467438 A0A1B0GU33 70 aa11.24□□□□□ -0.61
LINC01140-202ENST00000467438 HSPG2P98160 4391 aa11.22□□□□□ -0.61
LINC01140-202ENST00000467438 TNXBP22105 4242 aa11.21□□□□□ -0.61
LINC01140-202ENST00000467438 H1FX-AS1Q4G0G2 97 aa11.19□□□□□ -0.62
LINC01140-202ENST00000467438 COX6B2Q6YFQ2 88 aa11.17□□□□□ -0.62
LINC01140-202ENST00000467438 MYCBP2O75592 4640 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms