RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 OCR1Q9BZK8 76 aa8.68□□□□□ -1.02
DDX56-208ENST00000467318 IGFL1Q6UW32 110 aa8.67□□□□□ -1.02
DDX56-208ENST00000467318 SSBP3-AS1Q7Z2R9 100 aa8.67□□□□□ -1.02
DDX56-208ENST00000467318 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
DDX56-208ENST00000467318 MT1HL1P0DM35 61 aa8.66□□□□□ -1.02
DDX56-208ENST00000467318 SERP1Q9Y6X1 66 aa8.66□□□□□ -1.02
DDX56-208ENST00000467318 J3QL48 77 aa8.65□□□□□ -1.02
DDX56-208ENST00000467318 MOBPQ13875 183 aa8.65□□□□□ -1.02
DDX56-208ENST00000467318 SNURFQ9Y675 71 aa8.65□□□□□ -1.02
DDX56-208ENST00000467318 DSCR10P59022 87 aa8.63□□□□□ -1.03
DDX56-208ENST00000467318 TNXBP22105 4242 aa8.62□□□□□ -1.03
DDX56-208ENST00000467318 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
DDX56-208ENST00000467318 HCG22E2RYF7 251 aa8.59□□□□□ -1.03
DDX56-208ENST00000467318 SPAG11AQ6PDA7 123 aa8.59□□□□□ -1.03
DDX56-208ENST00000467318 LINC00304Q8N9R0 145 aa8.59□□□□□ -1.03
DDX56-208ENST00000467318 A0A087WSZ3 146 aa8.57□□□□□ -1.04
DDX56-208ENST00000467318 K7EQZ3 153 aa8.57□□□□□ -1.04
DDX56-208ENST00000467318 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
DDX56-208ENST00000467318 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
DDX56-208ENST00000467318 SPINK1P00995 79 aa8.55□□□□□ -1.04
DDX56-208ENST00000467318 CD164Q04900 197 aa8.54□□□□□ -1.04
DDX56-208ENST00000467318 SMIM26A0A096LP01 95 aa8.51□□□□□ -1.05
DDX56-208ENST00000467318 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
DDX56-208ENST00000467318 A0A0G2JQZ4 141 aa8.5□□□□□ -1.05
DDX56-208ENST00000467318 A8MWP4 228 aa8.49□□□□□ -1.05
DDX56-208ENST00000467318 PRR15Q8IV56 129 aa8.49□□□□□ -1.05
DDX56-208ENST00000467318 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
DDX56-208ENST00000467318 HRCT1Q6UXD1 115 aa8.48□□□□□ -1.05
DDX56-208ENST00000467318 MP68P56378 58 aa8.47□□□□□ -1.05
DDX56-208ENST00000467318 HERC1Q15751 4861 aa8.46□□□□□ -1.05
DDX56-208ENST00000467318 H3BPC8 53 aa8.46□□□□□ -1.05
DDX56-208ENST00000467318 NDUFB1O75438 58 aa8.46□□□□□ -1.05
DDX56-208ENST00000467318 DEFB116Q30KQ4 102 aa8.46□□□□□ -1.05
DDX56-208ENST00000467318 ZCCHC13Q8WW36 166 aaKnown RBP8.46□□□□□ -1.05
DDX56-208ENST00000467318 LIMD2Q9BT23 127 aa8.46□□□□□ -1.06
DDX56-208ENST00000467318 Q5XG85 94 aa8.45□□□□□ -1.06
DDX56-208ENST00000467318 CASC2Q6XLA1 102 aa8.45□□□□□ -1.06
DDX56-208ENST00000467318 WFDC13Q8IUB5 93 aa8.44□□□□□ -1.06
DDX56-208ENST00000467318 hDV103S1A0JD37 113 aa8.39□□□□□ -1.07
DDX56-208ENST00000467318 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
DDX56-208ENST00000467318 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
DDX56-208ENST00000467318 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
DDX56-208ENST00000467318 H0Y9P7 68 aa8.35□□□□□ -1.07
DDX56-208ENST00000467318 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
DDX56-208ENST00000467318 TRAV22A0A0B4J277 110 aa8.34□□□□□ -1.07
DDX56-208ENST00000467318 MMP24-AS1A0A0U1RRL7 71 aa8.34□□□□□ -1.07
DDX56-208ENST00000467318 RETNLBQ9BQ08 111 aa8.34□□□□□ -1.07
DDX56-208ENST00000467318 FP248Q71RG6 208 aaPredicted RBP8.34□□□□□ -1.08
DDX56-208ENST00000467318 LINC00208Q96KT6 92 aa8.33□□□□□ -1.08
DDX56-208ENST00000467318 Q96NJ1 140 aa8.33□□□□□ -1.08
DDX56-208ENST00000467318 SPANXA2-OT1Q8N9U9 137 aa8.32□□□□□ -1.08
DDX56-208ENST00000467318 C1orf195Q5TG92 126 aa8.31□□□□□ -1.08
DDX56-208ENST00000467318 PRR4Q16378 134 aa8.3□□□□□ -1.08
DDX56-208ENST00000467318 C8orf17Q9NRJ1 99 aa8.29□□□□□ -1.08
DDX56-208ENST00000467318 A0A1B0GVX0 72 aa8.28□□□□□ -1.08
DDX56-208ENST00000467318 C1orf64Q8NEQ6 169 aa8.27□□□□□ -1.08
DDX56-208ENST00000467318 IGLV7-46A0A075B6I9 117 aa8.27□□□□□ -1.09
DDX56-208ENST00000467318 HMCN2Q8NDA2 5059 aa8.23□□□□□ -1.09
DDX56-208ENST00000467318 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
DDX56-208ENST00000467318 Q1T7F1 81 aa8.21□□□□□ -1.09
DDX56-208ENST00000467318 MRPL34Q9BQ48 92 aaKnown RBP8.21□□□□□ -1.09
DDX56-208ENST00000467318 V9GYY9 64 aa8.21□□□□□ -1.09
DDX56-208ENST00000467318 TPRXLQ17RH7 258 aa8.21□□□□□ -1.1
DDX56-208ENST00000467318 MPLKIPQ8TAP9 179 aa8.2□□□□□ -1.1
DDX56-208ENST00000467318 LPAP08519 4548 aa8.2□□□□□ -1.1
DDX56-208ENST00000467318 C8orf87E5RJ46 101 aa8.18□□□□□ -1.1
DDX56-208ENST00000467318 NDUFS5O43920 106 aa8.17□□□□□ -1.1
DDX56-208ENST00000467318 KRTAP13-3Q3SY46 172 aa8.16□□□□□ -1.1
DDX56-208ENST00000467318 PRO0628Q9UI54 55 aa8.16□□□□□ -1.1
DDX56-208ENST00000467318 LRP2P98164 4655 aa8.12□□□□□ -1.11
DDX56-208ENST00000467318 LOC101927531A0A1B0GV80 90 aa8.1□□□□□ -1.11
DDX56-208ENST00000467318 C9orf92A6NGG3 77 aa8.09□□□□□ -1.11
DDX56-208ENST00000467318 LINC00313P59037 77 aa8.07□□□□□ -1.12
DDX56-208ENST00000467318 PCOTHQ58A44 107 aa8.06□□□□□ -1.12
DDX56-208ENST00000467318 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
DDX56-208ENST00000467318 XP32Q5T750 250 aa8.05□□□□□ -1.12
DDX56-208ENST00000467318 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
DDX56-208ENST00000467318 COA5Q86WW8 74 aa8.04□□□□□ -1.12
DDX56-208ENST00000467318 Q8N9P0 234 aaPredicted RBP8.01□□□□□ -1.13
DDX56-208ENST00000467318 PSPHP1O15172 72 aa7.98□□□□□ -1.13
DDX56-208ENST00000467318 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
DDX56-208ENST00000467318 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.13
DDX56-208ENST00000467318 Q75L30 129 aa7.96□□□□□ -1.13
DDX56-208ENST00000467318 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.13
DDX56-208ENST00000467318 Q5W150 140 aa7.95□□□□□ -1.14
DDX56-208ENST00000467318 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
DDX56-208ENST00000467318 A8MUN3 132 aa7.94□□□□□ -1.14
DDX56-208ENST00000467318 A8MUU9 505 aa7.94□□□□□ -1.14
DDX56-208ENST00000467318 SEC61BP60468 96 aaKnown RBP7.94□□□□□ -1.14
DDX56-208ENST00000467318 ACYP2P14621 99 aa7.92□□□□□ -1.14
DDX56-208ENST00000467318 HRES1P13985 223 aa7.92□□□□□ -1.14
DDX56-208ENST00000467318 Q5VV11 94 aa7.92□□□□□ -1.14
DDX56-208ENST00000467318 LINC01558Q9Y6Z2 57 aa7.91□□□□□ -1.14
DDX56-208ENST00000467318 PRR15LQ9BU68 103 aa7.9□□□□□ -1.14
DDX56-208ENST00000467318 ATP11AUNQ6ZP68 121 aa7.89□□□□□ -1.15
DDX56-208ENST00000467318 CHKB-CPT1BH3BT56 60 aa7.87□□□□□ -1.15
DDX56-208ENST00000467318 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
DDX56-208ENST00000467318 DMAC1Q96GE9 116 aa7.84□□□□□ -1.15
DDX56-208ENST00000467318 MUC17Q685J3 4493 aa7.83□□□□□ -1.16
DDX56-208ENST00000467318 RNF213Q63HN8 5207 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms