RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
CHD1L-205ENST00000467213 ZNF861PO60384 105 aa9.19□□□□□ -0.94
CHD1L-205ENST00000467213 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
CHD1L-205ENST00000467213 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
CHD1L-205ENST00000467213 FBN1P35555 2871 aaKnown RBP9.17□□□□□ -0.94
CHD1L-205ENST00000467213 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
CHD1L-205ENST00000467213 Q5W150 140 aa9.17□□□□□ -0.94
CHD1L-205ENST00000467213 PRR26Q8N8Z3 221 aa9.17□□□□□ -0.94
CHD1L-205ENST00000467213 PSORS1C2Q9UIG4 136 aa9.15□□□□□ -0.94
CHD1L-205ENST00000467213 NOTCH1P46531 2555 aa9.12□□□□□ -0.95
CHD1L-205ENST00000467213 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
CHD1L-205ENST00000467213 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
CHD1L-205ENST00000467213 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
CHD1L-205ENST00000467213 PLA2G1BP04054 148 aaKnown RBP9.1□□□□□ -0.95
CHD1L-205ENST00000467213 SPATA8Q6RVD6 105 aa9.1□□□□□ -0.95
CHD1L-205ENST00000467213 A0A087WTM6 91 aa9.09□□□□□ -0.95
CHD1L-205ENST00000467213 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
CHD1L-205ENST00000467213 COL7A1Q02388 2944 aa9.06□□□□□ -0.96
CHD1L-205ENST00000467213 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
CHD1L-205ENST00000467213 COL6A5A8TX70 2615 aa9.04□□□□□ -0.96
CHD1L-205ENST00000467213 A0A1B0GU69 56 aa9.03□□□□□ -0.96
CHD1L-205ENST00000467213 RTL8CO15255 209 aa9.03□□□□□ -0.96
CHD1L-205ENST00000467213 IGLV7-43P04211 117 aa9.02□□□□□ -0.96
CHD1L-205ENST00000467213 LINC00313P59037 77 aa9.02□□□□□ -0.96
CHD1L-205ENST00000467213 DNAH8Q96JB1 4490 aa9.01□□□□□ -0.97
CHD1L-205ENST00000467213 ANAPC11Q9NYG5 84 aa9□□□□□ -0.97
CHD1L-205ENST00000467213 SPINK6Q6UWN8 80 aa9□□□□□ -0.97
CHD1L-205ENST00000467213 HECTD4Q9Y4D8 3996 aa8.97□□□□□ -0.97
CHD1L-205ENST00000467213 UQCR11O14957 56 aa8.97□□□□□ -0.97
CHD1L-205ENST00000467213 VPS13DQ5THJ4 4388 aa8.97□□□□□ -0.97
CHD1L-205ENST00000467213 DNAH7Q8WXX0 4024 aa8.97□□□□□ -0.97
CHD1L-205ENST00000467213 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
CHD1L-205ENST00000467213 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
CHD1L-205ENST00000467213 PLECQ15149 4684 aaKnown RBP8.94□□□□□ -0.98
CHD1L-205ENST00000467213 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
CHD1L-205ENST00000467213 MIR22HGQ0VDD5 57 aa8.93□□□□□ -0.98
CHD1L-205ENST00000467213 STAB2Q8WWQ8 2551 aa8.92□□□□□ -0.98
CHD1L-205ENST00000467213 MGAM2Q2M2H8 2515 aa8.9□□□□□ -0.98
CHD1L-205ENST00000467213 IGKV2D-30A0A075B6S6 120 aa8.87□□□□□ -0.99
CHD1L-205ENST00000467213 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
CHD1L-205ENST00000467213 FRAS1Q86XX4 4008 aa8.85□□□□□ -0.99
CHD1L-205ENST00000467213 PRAC1Q96KF2 57 aa8.83□□□□□ -1
CHD1L-205ENST00000467213 PRKDCP78527 4128 aaKnown RBP8.83□□□□□ -1
CHD1L-205ENST00000467213 RETNLBQ9BQ08 111 aa8.79□□□□□ -1
CHD1L-205ENST00000467213 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
CHD1L-205ENST00000467213 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
CHD1L-205ENST00000467213 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
CHD1L-205ENST00000467213 DNAH2Q9P225 4427 aa8.75□□□□□ -1.01
CHD1L-205ENST00000467213 STARD9Q9P2P6 4700 aa8.72□□□□□ -1.01
CHD1L-205ENST00000467213 DNAH6Q9C0G6 4158 aa8.71□□□□□ -1.02
CHD1L-205ENST00000467213 LY6G6CO95867 125 aa8.69□□□□□ -1.02
CHD1L-205ENST00000467213 Q6ZSA8 131 aa8.69□□□□□ -1.02
CHD1L-205ENST00000467213 FBN3Q75N90 2809 aa8.67□□□□□ -1.02
CHD1L-205ENST00000467213 KRTAP1-4P0C5Y4 121 aa8.67□□□□□ -1.02
CHD1L-205ENST00000467213 RPS29P62273 56 aaKnown RBP8.67□□□□□ -1.02
CHD1L-205ENST00000467213 SPINK1P00995 79 aa8.66□□□□□ -1.02
CHD1L-205ENST00000467213 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
CHD1L-205ENST00000467213 CSAG1Q6PB30 78 aa8.62□□□□□ -1.03
CHD1L-205ENST00000467213 KMT2AQ03164 3969 aa8.6□□□□□ -1.03
CHD1L-205ENST00000467213 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
CHD1L-205ENST00000467213 A8MUU9 505 aa8.58□□□□□ -1.04
CHD1L-205ENST00000467213 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
CHD1L-205ENST00000467213 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
CHD1L-205ENST00000467213 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
CHD1L-205ENST00000467213 H0YAA0 97 aa8.53□□□□□ -1.04
CHD1L-205ENST00000467213 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
CHD1L-205ENST00000467213 Q8N1X5 172 aa8.5□□□□□ -1.05
CHD1L-205ENST00000467213 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
CHD1L-205ENST00000467213 C20orf166-AS1Q96NR2 134 aa8.49□□□□□ -1.05
CHD1L-205ENST00000467213 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
CHD1L-205ENST00000467213 A0A1B0GU33 70 aa8.47□□□□□ -1.05
CHD1L-205ENST00000467213 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
CHD1L-205ENST00000467213 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
CHD1L-205ENST00000467213 TGP01266 2768 aa8.45□□□□□ -1.06
CHD1L-205ENST00000467213 PKD1P98161 4303 aa8.42□□□□□ -1.06
CHD1L-205ENST00000467213 LRP1BQ9NZR2 4599 aa8.42□□□□□ -1.06
CHD1L-205ENST00000467213 DNHD1Q96M86 4753 aa8.4□□□□□ -1.06
CHD1L-205ENST00000467213 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
CHD1L-205ENST00000467213 SACSQ9NZJ4 4579 aa8.4□□□□□ -1.07
CHD1L-205ENST00000467213 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
CHD1L-205ENST00000467213 K7ERS5 55 aa8.34□□□□□ -1.07
CHD1L-205ENST00000467213 H3BS24 57 aa8.33□□□□□ -1.08
CHD1L-205ENST00000467213 ROMO1P60602 79 aa8.3□□□□□ -1.08
CHD1L-205ENST00000467213 FAT2Q9NYQ8 4349 aa8.3□□□□□ -1.08
CHD1L-205ENST00000467213 COX6B2Q6YFQ2 88 aa8.28□□□□□ -1.08
CHD1L-205ENST00000467213 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
CHD1L-205ENST00000467213 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
CHD1L-205ENST00000467213 RPL37P61927 97 aaKnown RBP8.14□□□□□ -1.11
CHD1L-205ENST00000467213 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
CHD1L-205ENST00000467213 KRTAP10-6P60371 365 aaPredicted RBP8.1□□□□□ -1.11
CHD1L-205ENST00000467213 KRTAP10-4P60372 401 aaPredicted RBP8.09□□□□□ -1.11
CHD1L-205ENST00000467213 APOBP04114 4563 aaKnown RBP8.07□□□□□ -1.12
CHD1L-205ENST00000467213 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
CHD1L-205ENST00000467213 HYDINQ4G0P3 5121 aa8.05□□□□□ -1.12
CHD1L-205ENST00000467213 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
CHD1L-205ENST00000467213 P0C880 135 aa7.99□□□□□ -1.13
CHD1L-205ENST00000467213 FLG2Q5D862 2391 aaPredicted RBP7.98□□□□□ -1.13
CHD1L-205ENST00000467213 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.13
CHD1L-205ENST00000467213 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
CHD1L-205ENST00000467213 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms