RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
NPHP4-205ENST00000466897 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
NPHP4-205ENST00000466897 BPY2O14599 106 aa8.29□□□□□ -1.08
NPHP4-205ENST00000466897 NDUFB1O75438 58 aa8.29□□□□□ -1.08
NPHP4-205ENST00000466897 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
NPHP4-205ENST00000466897 DSCR10P59022 87 aa8.27□□□□□ -1.09
NPHP4-205ENST00000466897 LINC00313P59037 77 aa8.26□□□□□ -1.09
NPHP4-205ENST00000466897 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
NPHP4-205ENST00000466897 IGKV3D-7A0A0C4DH55 119 aa8.25□□□□□ -1.09
NPHP4-205ENST00000466897 J3QR89 54 aa8.25□□□□□ -1.09
NPHP4-205ENST00000466897 PRR15Q8IV56 129 aa8.25□□□□□ -1.09
NPHP4-205ENST00000466897 CXCL6P80162 114 aa8.22□□□□□ -1.09
NPHP4-205ENST00000466897 KRTAP16-1A8MUX0 517 aa8.21□□□□□ -1.1
NPHP4-205ENST00000466897 K7EQZ3 153 aa8.21□□□□□ -1.1
NPHP4-205ENST00000466897 Q75L30 129 aa8.21□□□□□ -1.1
NPHP4-205ENST00000466897 NOTCH2NLQ7Z3S9 236 aa8.21□□□□□ -1.1
NPHP4-205ENST00000466897 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.1
NPHP4-205ENST00000466897 RPL37P61927 97 aaKnown RBP8.2□□□□□ -1.1
NPHP4-205ENST00000466897 SEC61BP60468 96 aaKnown RBP8.19□□□□□ -1.1
NPHP4-205ENST00000466897 ATP5EP2Q5VTU8 51 aa8.19□□□□□ -1.1
NPHP4-205ENST00000466897 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
NPHP4-205ENST00000466897 A8MUU9 505 aa8.18□□□□□ -1.1
NPHP4-205ENST00000466897 MMP24-AS1A0A0U1RRL7 71 aa8.16□□□□□ -1.1
NPHP4-205ENST00000466897 LINC00643Q86TS7 51 aa8.15□□□□□ -1.1
NPHP4-205ENST00000466897 MUC17Q685J3 4493 aa8.15□□□□□ -1.11
NPHP4-205ENST00000466897 K7ERU9 68 aa8.14□□□□□ -1.11
NPHP4-205ENST00000466897 Q8N9L7 120 aa8.14□□□□□ -1.11
NPHP4-205ENST00000466897 Q8N9P0 234 aaPredicted RBP8.12□□□□□ -1.11
NPHP4-205ENST00000466897 TMEM254Q8TBM7 123 aa8.12□□□□□ -1.11
NPHP4-205ENST00000466897 hDV103S1A0JD37 113 aa8.11□□□□□ -1.11
NPHP4-205ENST00000466897 RNF213Q63HN8 5207 aa8.09□□□□□ -1.11
NPHP4-205ENST00000466897 PCOTHQ58A44 107 aa8.09□□□□□ -1.11
NPHP4-205ENST00000466897 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
NPHP4-205ENST00000466897 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
NPHP4-205ENST00000466897 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
NPHP4-205ENST00000466897 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
NPHP4-205ENST00000466897 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
NPHP4-205ENST00000466897 HIST1H4AP62805 103 aaKnown RBP8□□□□□ -1.13
NPHP4-205ENST00000466897 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
NPHP4-205ENST00000466897 KRTAP4-1Q9BYQ7 146 aa7.98□□□□□ -1.13
NPHP4-205ENST00000466897 MUC2Q02817 5179 aa7.96□□□□□ -1.13
NPHP4-205ENST00000466897 NDUFS5O43920 106 aa7.96□□□□□ -1.14
NPHP4-205ENST00000466897 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
NPHP4-205ENST00000466897 TP53AIP1Q9HCN2 124 aa7.93□□□□□ -1.14
NPHP4-205ENST00000466897 A0A087WVE0 104 aa7.92□□□□□ -1.14
NPHP4-205ENST00000466897 MT-ATP8P03928 68 aa7.88□□□□□ -1.15
NPHP4-205ENST00000466897 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
NPHP4-205ENST00000466897 Q5W150 140 aa7.87□□□□□ -1.15
NPHP4-205ENST00000466897 SPINK7P58062 85 aa7.83□□□□□ -1.16
NPHP4-205ENST00000466897 UQCRQO14949 82 aa7.81□□□□□ -1.16
NPHP4-205ENST00000466897 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
NPHP4-205ENST00000466897 KRTAP19-2Q3LHN2 52 aa7.79□□□□□ -1.16
NPHP4-205ENST00000466897 HRES1P13985 223 aa7.78□□□□□ -1.16
NPHP4-205ENST00000466897 C7orf65Q6ZTY9 151 aa7.78□□□□□ -1.16
NPHP4-205ENST00000466897 OCR1Q9BZK8 76 aa7.78□□□□□ -1.16
NPHP4-205ENST00000466897 MPLKIPQ8TAP9 179 aa7.77□□□□□ -1.17
NPHP4-205ENST00000466897 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
NPHP4-205ENST00000466897 IGKV2-30P06310 120 aa7.75□□□□□ -1.17
NPHP4-205ENST00000466897 ATOX1O00244 68 aa7.74□□□□□ -1.17
NPHP4-205ENST00000466897 SCGB1A1P11684 91 aa7.74□□□□□ -1.17
NPHP4-205ENST00000466897 IGKV2D-30A0A075B6S6 120 aa7.73□□□□□ -1.17
NPHP4-205ENST00000466897 FAM236AA0A1B0GUQ0 79 aa7.73□□□□□ -1.17
NPHP4-205ENST00000466897 FAM236BA0A1B0GV22 79 aa7.73□□□□□ -1.17
NPHP4-205ENST00000466897 RBM12B-AS1Q9P1G2 102 aa7.73□□□□□ -1.17
NPHP4-205ENST00000466897 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
NPHP4-205ENST00000466897 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.17
NPHP4-205ENST00000466897 LOC101927531A0A1B0GV80 90 aa7.7□□□□□ -1.18
NPHP4-205ENST00000466897 H0Y9P7 68 aa7.7□□□□□ -1.18
NPHP4-205ENST00000466897 SMIM20Q8N5G0 67 aa7.7□□□□□ -1.18
NPHP4-205ENST00000466897 C5orf47Q569G3 176 aa7.69□□□□□ -1.18
NPHP4-205ENST00000466897 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
NPHP4-205ENST00000466897 MP68P56378 58 aa7.66□□□□□ -1.18
NPHP4-205ENST00000466897 CYP4F30PQ9H0H9 118 aa7.66□□□□□ -1.18
NPHP4-205ENST00000466897 H3BPC8 53 aa7.65□□□□□ -1.18
NPHP4-205ENST00000466897 SVIPQ8NHG7 77 aa7.65□□□□□ -1.18
NPHP4-205ENST00000466897 TRAV7A0A075B6U4 112 aa7.64□□□□□ -1.19
NPHP4-205ENST00000466897 FAM236DA0A1B0GTK5 79 aa7.62□□□□□ -1.19
NPHP4-205ENST00000466897 FAM236CP0DP71 79 aa7.62□□□□□ -1.19
NPHP4-205ENST00000466897 C1orf64Q8NEQ6 169 aa7.62□□□□□ -1.19
NPHP4-205ENST00000466897 LINC00208Q96KT6 92 aa7.61□□□□□ -1.19
NPHP4-205ENST00000466897 PCP4P48539 62 aa7.6□□□□□ -1.19
NPHP4-205ENST00000466897 MT1HP80294 61 aa7.6□□□□□ -1.19
NPHP4-205ENST00000466897 C4orf26Q17RF5 130 aa7.57□□□□□ -1.2
NPHP4-205ENST00000466897 SERP2Q8N6R1 65 aa7.55□□□□□ -1.2
NPHP4-205ENST00000466897 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
NPHP4-205ENST00000466897 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
NPHP4-205ENST00000466897 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
NPHP4-205ENST00000466897 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
NPHP4-205ENST00000466897 KRTAP3-1Q9BYR8 98 aa7.48□□□□□ -1.21
NPHP4-205ENST00000466897 M0R2T5 61 aa7.45□□□□□ -1.22
NPHP4-205ENST00000466897 A8MUN3 132 aa7.43□□□□□ -1.22
NPHP4-205ENST00000466897 COX7CP15954 63 aa7.43□□□□□ -1.22
NPHP4-205ENST00000466897 C20orf197Q8N268 126 aa7.41□□□□□ -1.22
NPHP4-205ENST00000466897 SNURFQ9Y675 71 aa7.39□□□□□ -1.23
NPHP4-205ENST00000466897 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
NPHP4-205ENST00000466897 KRTAP10-6P60371 365 aaPredicted RBP7.38□□□□□ -1.23
NPHP4-205ENST00000466897 ANAPC13Q9BS18 74 aa7.38□□□□□ -1.23
NPHP4-205ENST00000466897 DMAC1Q96GE9 116 aa7.35□□□□□ -1.23
NPHP4-205ENST00000466897 S4R3F8 94 aa7.35□□□□□ -1.23
NPHP4-205ENST00000466897 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms