RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 ZCCHC13Q8WW36 166 aaKnown RBP11.88□□□□□ -0.51
CCDC78-207ENST00000466708 SMR3BP02814 79 aaPredicted RBP11.87□□□□□ -0.51
CCDC78-207ENST00000466708 TYMSOSQ8TAI1 123 aa11.86□□□□□ -0.51
CCDC78-207ENST00000466708 LIMD2Q9BT23 127 aa11.86□□□□□ -0.51
CCDC78-207ENST00000466708 ATP5EP56381 51 aaPredicted RBP11.86□□□□□ -0.51
CCDC78-207ENST00000466708 TP53AIP1Q9HCN2 124 aa11.86□□□□□ -0.51
CCDC78-207ENST00000466708 H3BPC8 53 aa11.84□□□□□ -0.51
CCDC78-207ENST00000466708 C4orf48Q5BLP8 95 aa11.83□□□□□ -0.51
CCDC78-207ENST00000466708 MRPL34Q9BQ48 92 aaKnown RBP11.82□□□□□ -0.52
CCDC78-207ENST00000466708 H0Y9P7 68 aa11.81□□□□□ -0.52
CCDC78-207ENST00000466708 C1orf195Q5TG92 126 aa11.81□□□□□ -0.52
CCDC78-207ENST00000466708 C8orf87E5RJ46 101 aa11.8□□□□□ -0.52
CCDC78-207ENST00000466708 SPINK1P00995 79 aa11.8□□□□□ -0.52
CCDC78-207ENST00000466708 NOTCH2NLQ7Z3S9 236 aa11.79□□□□□ -0.52
CCDC78-207ENST00000466708 TRAV22A0A0B4J277 110 aa11.78□□□□□ -0.52
CCDC78-207ENST00000466708 KRTAP10-4P60372 401 aaPredicted RBP11.78□□□□□ -0.52
CCDC78-207ENST00000466708 LINC00208Q96KT6 92 aa11.78□□□□□ -0.52
CCDC78-207ENST00000466708 KMT2CQ8NEZ4 4911 aaKnown RBP11.77□□□□□ -0.52
CCDC78-207ENST00000466708 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
CCDC78-207ENST00000466708 PRR26Q8N8Z3 221 aa11.74□□□□□ -0.53
CCDC78-207ENST00000466708 SERP1Q9Y6X1 66 aa11.74□□□□□ -0.53
CCDC78-207ENST00000466708 NDUFS5O43920 106 aa11.74□□□□□ -0.53
CCDC78-207ENST00000466708 RPS29P62273 56 aaKnown RBP11.73□□□□□ -0.53
CCDC78-207ENST00000466708 SPAG11AQ6PDA7 123 aa11.73□□□□□ -0.53
CCDC78-207ENST00000466708 LINC00304Q8N9R0 145 aa11.71□□□□□ -0.54
CCDC78-207ENST00000466708 LINC00313P59037 77 aa11.7□□□□□ -0.54
CCDC78-207ENST00000466708 C1orf64Q8NEQ6 169 aa11.7□□□□□ -0.54
CCDC78-207ENST00000466708 OXTP01178 125 aa11.65□□□□□ -0.55
CCDC78-207ENST00000466708 FAM229AH3BQW9 127 aa11.63□□□□□ -0.55
CCDC78-207ENST00000466708 FAT1Q14517 4588 aa11.61□□□□□ -0.55
CCDC78-207ENST00000466708 SPANXA2-OT1Q8N9U9 137 aa11.6□□□□□ -0.55
CCDC78-207ENST00000466708 Q8N9P0 234 aaPredicted RBP11.59□□□□□ -0.55
CCDC78-207ENST00000466708 CYP4F30PQ9H0H9 118 aa11.58□□□□□ -0.56
CCDC78-207ENST00000466708 KRTAP16-1A8MUX0 517 aa11.54□□□□□ -0.56
CCDC78-207ENST00000466708 KRTAP13-3Q3SY46 172 aa11.53□□□□□ -0.56
CCDC78-207ENST00000466708 LOC101927531A0A1B0GV80 90 aa11.52□□□□□ -0.57
CCDC78-207ENST00000466708 Q5W150 140 aa11.52□□□□□ -0.57
CCDC78-207ENST00000466708 SMIM26A0A096LP01 95 aa11.49□□□□□ -0.57
CCDC78-207ENST00000466708 Q5VSD8 79 aa11.48□□□□□ -0.57
CCDC78-207ENST00000466708 PRR4Q16378 134 aa11.47□□□□□ -0.57
CCDC78-207ENST00000466708 IGLV7-46A0A075B6I9 117 aa11.46□□□□□ -0.57
CCDC78-207ENST00000466708 PCOTHQ58A44 107 aa11.46□□□□□ -0.58
CCDC78-207ENST00000466708 PKHD1L1Q86WI1 4243 aa11.45□□□□□ -0.58
CCDC78-207ENST00000466708 RYR3Q15413 4870 aa11.45□□□□□ -0.58
CCDC78-207ENST00000466708 HSPG2P98160 4391 aa11.37□□□□□ -0.59
CCDC78-207ENST00000466708 KRTAP10-8P60410 259 aa11.36□□□□□ -0.59
CCDC78-207ENST00000466708 FP248Q71RG6 208 aaPredicted RBP11.36□□□□□ -0.59
CCDC78-207ENST00000466708 IGKV2-30P06310 120 aa11.33□□□□□ -0.6
CCDC78-207ENST00000466708 RETNLBQ9BQ08 111 aa11.33□□□□□ -0.6
CCDC78-207ENST00000466708 Q8N1X5 172 aa11.31□□□□□ -0.6
CCDC78-207ENST00000466708 RYR1P21817 5038 aa11.3□□□□□ -0.6
CCDC78-207ENST00000466708 FLG2Q5D862 2391 aaPredicted RBP11.27□□□□□ -0.61
CCDC78-207ENST00000466708 C4orf26Q17RF5 130 aa11.26□□□□□ -0.61
CCDC78-207ENST00000466708 C9orf92A6NGG3 77 aa11.24□□□□□ -0.61
CCDC78-207ENST00000466708 C20orf166-AS1Q96NR2 134 aa11.24□□□□□ -0.61
CCDC78-207ENST00000466708 A8MUU9 505 aa11.23□□□□□ -0.61
CCDC78-207ENST00000466708 COA5Q86WW8 74 aa11.23□□□□□ -0.61
CCDC78-207ENST00000466708 KRTAP17-1Q9BYP8 105 aa11.23□□□□□ -0.61
CCDC78-207ENST00000466708 HRES1P13985 223 aa11.22□□□□□ -0.61
CCDC78-207ENST00000466708 MPLKIPQ8TAP9 179 aa11.21□□□□□ -0.62
CCDC78-207ENST00000466708 IGKV2D-30A0A075B6S6 120 aa11.19□□□□□ -0.62
CCDC78-207ENST00000466708 Q1T7F1 81 aa11.19□□□□□ -0.62
CCDC78-207ENST00000466708 TNXBP22105 4242 aa11.18□□□□□ -0.62
CCDC78-207ENST00000466708 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
CCDC78-207ENST00000466708 ACYP2P14621 99 aa11.14□□□□□ -0.63
CCDC78-207ENST00000466708 C7orf65Q6ZTY9 151 aa11.14□□□□□ -0.63
CCDC78-207ENST00000466708 DMAC1Q96GE9 116 aa11.14□□□□□ -0.63
CCDC78-207ENST00000466708 V9GYY9 64 aa11.14□□□□□ -0.63
CCDC78-207ENST00000466708 KIAA1109Q2LD37 5005 aa11.13□□□□□ -0.63
CCDC78-207ENST00000466708 FAT3Q8TDW7 4589 aa11.1□□□□□ -0.63
CCDC78-207ENST00000466708 Q75L30 129 aa11.09□□□□□ -0.63
CCDC78-207ENST00000466708 MT1HL1P0DM35 61 aa11.09□□□□□ -0.63
CCDC78-207ENST00000466708 DMBT1Q9UGM3 2413 aaPredicted RBP11.03□□□□□ -0.64
CCDC78-207ENST00000466708 EPPK1P58107 5090 aaKnown RBP11.03□□□□□ -0.64
CCDC78-207ENST00000466708 CHKB-CPT1BH3BT56 60 aa10.96□□□□□ -0.65
CCDC78-207ENST00000466708 A8MUN3 132 aa10.93□□□□□ -0.66
CCDC78-207ENST00000466708 PSPHP1O15172 72 aa10.93□□□□□ -0.66
CCDC78-207ENST00000466708 SPINK7P58062 85 aa10.92□□□□□ -0.66
CCDC78-207ENST00000466708 ATP11AUNQ6ZP68 121 aa10.91□□□□□ -0.66
CCDC78-207ENST00000466708 LINC01558Q9Y6Z2 57 aa10.91□□□□□ -0.66
CCDC78-207ENST00000466708 MYCBP2O75592 4640 aa10.91□□□□□ -0.66
CCDC78-207ENST00000466708 RPL37P61927 97 aaKnown RBP10.89□□□□□ -0.67
CCDC78-207ENST00000466708 XP32Q5T750 250 aa10.88□□□□□ -0.67
CCDC78-207ENST00000466708 PRR15LQ9BU68 103 aa10.87□□□□□ -0.67
CCDC78-207ENST00000466708 Q5VV11 94 aa10.85□□□□□ -0.67
CCDC78-207ENST00000466708 KRTAP4-5Q9BYR2 181 aa10.84□□□□□ -0.67
CCDC78-207ENST00000466708 BRK1Q8WUW1 75 aa10.77□□□□□ -0.68
CCDC78-207ENST00000466708 TPRXLQ17RH7 258 aa10.77□□□□□ -0.69
CCDC78-207ENST00000466708 PRO0628Q9UI54 55 aa10.73□□□□□ -0.69
CCDC78-207ENST00000466708 COX6B2Q6YFQ2 88 aa10.72□□□□□ -0.69
CCDC78-207ENST00000466708 KRTAP3-1Q9BYR8 98 aa10.72□□□□□ -0.69
CCDC78-207ENST00000466708 SPTSSBQ8NFR3 76 aa10.68□□□□□ -0.7
CCDC78-207ENST00000466708 SVIPQ8NHG7 77 aa10.67□□□□□ -0.7
CCDC78-207ENST00000466708 A0A1B0GU69 56 aa10.63□□□□□ -0.71
CCDC78-207ENST00000466708 A6NED7 52 aa10.62□□□□□ -0.71
CCDC78-207ENST00000466708 J3QL48 77 aa10.6□□□□□ -0.71
CCDC78-207ENST00000466708 BIRC6Q9NR09 4857 aa10.5□□□□□ -0.73
CCDC78-207ENST00000466708 ABCA13Q86UQ4 5058 aa10.49□□□□□ -0.73
CCDC78-207ENST00000466708 CDC42SE1Q9NRR8 79 aa10.49□□□□□ -0.73
CCDC78-207ENST00000466708 SEC61GP60059 68 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms