RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ATRQ13535 2644 aa0.39□□□□□ -2.35
CDC42BPA-211ENST00000466538 CPS1P31327 1500 aa0.39□□□□□ -2.35
CDC42BPA-211ENST00000466538 WNK1Q9H4A3 2382 aa0.39□□□□□ -2.35
CDC42BPA-211ENST00000466538 LAMA2P24043 3122 aaKnown RBP0.39□□□□□ -2.35
CDC42BPA-211ENST00000466538 BOD1L1Q8NFC6 3051 aa0.39□□□□□ -2.35
CDC42BPA-211ENST00000466538 KNL1Q8NG31 2342 aa0.39□□□□□ -2.35
CDC42BPA-211ENST00000466538 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
CDC42BPA-211ENST00000466538 CSMD1Q96PZ7 3565 aa0.39□□□□□ -2.35
CDC42BPA-211ENST00000466538 TOGARAM1Q9Y4F4 1720 aa0.38□□□□□ -2.35
CDC42BPA-211ENST00000466538 DMBT1Q9UGM3 2413 aaPredicted RBP0.38□□□□□ -2.35
CDC42BPA-211ENST00000466538 C6orf48Q9UBA6 75 aa0.38□□□□□ -2.35
CDC42BPA-211ENST00000466538 COL12A1Q99715 3063 aa0.38□□□□□ -2.35
CDC42BPA-211ENST00000466538 DSPP15924 2871 aaKnown RBP0.38□□□□□ -2.35
CDC42BPA-211ENST00000466538 SYCP2Q9BX26 1530 aa0.38□□□□□ -2.35
CDC42BPA-211ENST00000466538 RIF1Q5UIP0 2472 aaKnown RBP0.38□□□□□ -2.35
CDC42BPA-211ENST00000466538 MKI67P46013 3256 aaKnown RBP0.37□□□□□ -2.35
CDC42BPA-211ENST00000466538 PDE4DIPQ5VU43 2346 aa0.37□□□□□ -2.35
CDC42BPA-211ENST00000466538 TEX15Q9BXT5 2789 aa0.37□□□□□ -2.35
CDC42BPA-211ENST00000466538 H0YGX0 51 aa0.37□□□□□ -2.35
CDC42BPA-211ENST00000466538 TMEM167BQ9NRX6 74 aa0.37□□□□□ -2.35
CDC42BPA-211ENST00000466538 EP300Q09472 2414 aaPredicted RBP0.37□□□□□ -2.35
CDC42BPA-211ENST00000466538 TGP01266 2768 aa0.37□□□□□ -2.35
CDC42BPA-211ENST00000466538 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
CDC42BPA-211ENST00000466538 UGGT1Q9NYU2 1555 aa0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 CFAP47Q6ZTR5 3102 aa0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 PRKDCP78527 4128 aaKnown RBP0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 RNF213Q63HN8 5207 aa0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 PRM1P04553 51 aa0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 KIAA0586Q9BVV6 1533 aa0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 EYSQ5T1H1 3165 aa0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 BSNQ9UPA5 3926 aa0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
CDC42BPA-211ENST00000466538 PRRC2CQ9Y520 2896 aaKnown RBP0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 TLN1Q9Y490 2541 aaKnown RBP0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 BIRC6Q9NR09 4857 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 APC2O95996 2303 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 SPEGQ15772 3267 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 UNC80Q8N2C7 3258 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 IGIPA6NJ69 53 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 H3BUA1 57 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 PLNP26678 52 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 WT1-ASQ06250 92 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 MGAM2Q2M2H8 2515 aa0.35□□□□□ -2.35
CDC42BPA-211ENST00000466538 COL7A1Q02388 2944 aa0.34□□□□□ -2.35
CDC42BPA-211ENST00000466538 TLN2Q9Y4G6 2542 aa0.34□□□□□ -2.35
CDC42BPA-211ENST00000466538 MYCBP2O75592 4640 aa0.34□□□□□ -2.35
CDC42BPA-211ENST00000466538 ACANP16112 2415 aa0.34□□□□□ -2.35
CDC42BPA-211ENST00000466538 ABRACLQ9P1F3 81 aa0.34□□□□□ -2.36
CDC42BPA-211ENST00000466538 HUWE1Q7Z6Z7 4374 aaKnown RBP0.34□□□□□ -2.36
CDC42BPA-211ENST00000466538 CELSR1Q9NYQ6 3014 aa0.34□□□□□ -2.36
CDC42BPA-211ENST00000466538 ITPR2Q14571 2701 aa0.34□□□□□ -2.36
CDC42BPA-211ENST00000466538 DNHD1Q96M86 4753 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 LAMA3Q16787 3333 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 RANBP2P49792 3224 aaKnown RBP0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 ANKRD36CQ5JPF3 1778 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 RELNP78509 3460 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 PRLHP81277 87 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 DEFB106AQ8N104 65 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 LINC00308Q8TCZ7 52 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 TIMM8BQ9Y5J9 83 aaPredicted RBP0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 NRXN3Q9Y4C0 1643 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 NBEAQ8NFP9 2946 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 CLASP1Q7Z460 1538 aa0.33□□□□□ -2.36
CDC42BPA-211ENST00000466538 RPS27P42677 84 aaKnown RBP0.32□□□□□ -2.36
CDC42BPA-211ENST00000466538 RPS27LQ71UM5 84 aaKnown RBP0.32□□□□□ -2.36
CDC42BPA-211ENST00000466538 CMC2Q9NRP2 79 aa0.32□□□□□ -2.36
CDC42BPA-211ENST00000466538 HMCN2Q8NDA2 5059 aa0.32□□□□□ -2.36
CDC42BPA-211ENST00000466538 CDC42BPAQ5VT25 1732 aa0.32□□□□□ -2.36
CDC42BPA-211ENST00000466538 EP400Q96L91 3159 aa0.32□□□□□ -2.36
CDC42BPA-211ENST00000466538 DCHS1Q96JQ0 3298 aa0.32□□□□□ -2.36
CDC42BPA-211ENST00000466538 SPTAN1Q13813 2472 aaKnown RBP0.31□□□□□ -2.36
CDC42BPA-211ENST00000466538 S4R3F8 94 aa0.31□□□□□ -2.36
CDC42BPA-211ENST00000466538 AGLP35573 1532 aa0.31□□□□□ -2.36
CDC42BPA-211ENST00000466538 NIPBLQ6KC79 2804 aaeCLIP0.31□□□□□ -2.36
CDC42BPA-211ENST00000466538 DNAH12Q6ZR08 3092 aa0.31□□□□□ -2.36
CDC42BPA-211ENST00000466538 MUC3AQ02505 3323 aa0.31□□□□□ -2.36
CDC42BPA-211ENST00000466538 FANCD2Q9BXW9 1451 aa0.3□□□□□ -2.36
CDC42BPA-211ENST00000466538 SMIM27A0A1W2PRY6 76 aa0.3□□□□□ -2.36
CDC42BPA-211ENST00000466538 SNRPGP15A8MWD9 76 aa0.3□□□□□ -2.36
CDC42BPA-211ENST00000466538 SPRR2DP22532 72 aa0.3□□□□□ -2.36
CDC42BPA-211ENST00000466538 MTORP42345 2549 aa0.3□□□□□ -2.36
CDC42BPA-211ENST00000466538 NBASA2RRP1 2371 aa0.3□□□□□ -2.36
CDC42BPA-211ENST00000466538 BRCA2P51587 3418 aa0.29□□□□□ -2.36
CDC42BPA-211ENST00000466538 ADCY10Q96PN6 1610 aa0.29□□□□□ -2.36
CDC42BPA-211ENST00000466538 CENPFP49454 3210 aa0.29□□□□□ -2.36
CDC42BPA-211ENST00000466538 USH2AO75445 5202 aa0.28□□□□□ -2.36
CDC42BPA-211ENST00000466538 C5orf42Q9H799 3197 aa0.28□□□□□ -2.36
CDC42BPA-211ENST00000466538 H3BNG1 76 aa0.28□□□□□ -2.36
CDC42BPA-211ENST00000466538 NOP10Q9NPE3 64 aaKnown RBP0.28□□□□□ -2.36
CDC42BPA-211ENST00000466538 LRBAP50851 2863 aa0.28□□□□□ -2.36
CDC42BPA-211ENST00000466538 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
CDC42BPA-211ENST00000466538 CEP250Q9BV73 2442 aa0.28□□□□□ -2.36
CDC42BPA-211ENST00000466538 NF1P21359 2839 aa0.28□□□□□ -2.37
CDC42BPA-211ENST00000466538 WDR87Q6ZQQ6 2873 aa0.27□□□□□ -2.37
CDC42BPA-211ENST00000466538 PCNX1Q96RV3 2341 aa0.27□□□□□ -2.37
CDC42BPA-211ENST00000466538 ASPMQ8IZT6 3477 aa0.27□□□□□ -2.37
CDC42BPA-211ENST00000466538 C9orf92A6NGG3 77 aa0.27□□□□□ -2.37
CDC42BPA-211ENST00000466538 CRYBG3Q68DQ2 2970 aa0.27□□□□□ -2.37
CDC42BPA-211ENST00000466538 HERC2O95714 4834 aa0.27□□□□□ -2.37
CDC42BPA-211ENST00000466538 KMT2AQ03164 3969 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms