RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 A0A1B0GVX0 72 aa9.07□□□□□ -0.96
GAPDH-206ENST00000466525 LINC01558Q9Y6Z2 57 aa9.07□□□□□ -0.96
GAPDH-206ENST00000466525 HECTD4Q9Y4D8 3996 aa9.06□□□□□ -0.96
GAPDH-206ENST00000466525 SPACA4Q8TDM5 124 aa9.06□□□□□ -0.96
GAPDH-206ENST00000466525 CD164Q04900 197 aa9.05□□□□□ -0.96
GAPDH-206ENST00000466525 ATP11AUNQ6ZP68 121 aa9.05□□□□□ -0.96
GAPDH-206ENST00000466525 Q6ZRN7 208 aaPredicted RBP9.05□□□□□ -0.96
GAPDH-206ENST00000466525 KIAA1109Q2LD37 5005 aa9.05□□□□□ -0.96
GAPDH-206ENST00000466525 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
GAPDH-206ENST00000466525 MRPL34Q9BQ48 92 aaKnown RBP9.03□□□□□ -0.96
GAPDH-206ENST00000466525 PANO1I0J062 215 aa9□□□□□ -0.97
GAPDH-206ENST00000466525 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
GAPDH-206ENST00000466525 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
GAPDH-206ENST00000466525 CDK2AP2O75956 126 aa9□□□□□ -0.97
GAPDH-206ENST00000466525 PCOTHQ58A44 107 aa8.99□□□□□ -0.97
GAPDH-206ENST00000466525 LCA10Q71F78 164 aa8.98□□□□□ -0.97
GAPDH-206ENST00000466525 DNAH6Q9C0G6 4158 aa8.97□□□□□ -0.97
GAPDH-206ENST00000466525 VPS13DQ5THJ4 4388 aa8.97□□□□□ -0.97
GAPDH-206ENST00000466525 A6NED7 52 aa8.97□□□□□ -0.97
GAPDH-206ENST00000466525 A8MU10 97 aa8.96□□□□□ -0.98
GAPDH-206ENST00000466525 KTN1-AS1Q86SY8 53 aa8.96□□□□□ -0.98
GAPDH-206ENST00000466525 IGHV6-1A0A0B4J1U7 121 aa8.95□□□□□ -0.98
GAPDH-206ENST00000466525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.95□□□□□ -0.98
GAPDH-206ENST00000466525 IGLV5-52A0A0A0MRZ9 124 aa8.94□□□□□ -0.98
GAPDH-206ENST00000466525 HRES1P13985 223 aa8.94□□□□□ -0.98
GAPDH-206ENST00000466525 NDUFS5O43920 106 aa8.94□□□□□ -0.98
GAPDH-206ENST00000466525 SRRM2Q9UQ35 2752 aaKnown RBP8.92□□□□□ -0.98
GAPDH-206ENST00000466525 A0A1B0GVY2 172 aa8.92□□□□□ -0.98
GAPDH-206ENST00000466525 ZNF861PO60384 105 aa8.92□□□□□ -0.98
GAPDH-206ENST00000466525 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
GAPDH-206ENST00000466525 A6NN06 94 aa8.91□□□□□ -0.98
GAPDH-206ENST00000466525 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
GAPDH-206ENST00000466525 PKHD1P08F94 4074 aa8.89□□□□□ -0.99
GAPDH-206ENST00000466525 A0A087WTM6 91 aa8.88□□□□□ -0.99
GAPDH-206ENST00000466525 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
GAPDH-206ENST00000466525 SPAG11AQ6PDA7 123 aa8.88□□□□□ -0.99
GAPDH-206ENST00000466525 DNAH11Q96DT5 4516 aa8.87□□□□□ -0.99
GAPDH-206ENST00000466525 FAT2Q9NYQ8 4349 aa8.87□□□□□ -0.99
GAPDH-206ENST00000466525 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
GAPDH-206ENST00000466525 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
GAPDH-206ENST00000466525 SPTSSBQ8NFR3 76 aa8.85□□□□□ -0.99
GAPDH-206ENST00000466525 DNAH2Q9P225 4427 aa8.84□□□□□ -0.99
GAPDH-206ENST00000466525 A0A087X002 238 aa8.84□□□□□ -0.99
GAPDH-206ENST00000466525 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -0.99
GAPDH-206ENST00000466525 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
GAPDH-206ENST00000466525 RTL8CO15255 209 aa8.83□□□□□ -1
GAPDH-206ENST00000466525 ACYP2P14621 99 aa8.83□□□□□ -1
GAPDH-206ENST00000466525 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
GAPDH-206ENST00000466525 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
GAPDH-206ENST00000466525 Q5W150 140 aa8.8□□□□□ -1
GAPDH-206ENST00000466525 KRTAP4-5Q9BYR2 181 aa8.8□□□□□ -1
GAPDH-206ENST00000466525 DMAC1Q96GE9 116 aa8.79□□□□□ -1
GAPDH-206ENST00000466525 SPINK7P58062 85 aa8.78□□□□□ -1
GAPDH-206ENST00000466525 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
GAPDH-206ENST00000466525 IGLV7-43P04211 117 aa8.77□□□□□ -1
GAPDH-206ENST00000466525 HSPG2P98160 4391 aa8.75□□□□□ -1.01
GAPDH-206ENST00000466525 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
GAPDH-206ENST00000466525 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
GAPDH-206ENST00000466525 ANAPC11Q9NYG5 84 aa8.74□□□□□ -1.01
GAPDH-206ENST00000466525 C1orf134Q5TEV5 83 aa8.74□□□□□ -1.01
GAPDH-206ENST00000466525 PKD1P98161 4303 aa8.73□□□□□ -1.01
GAPDH-206ENST00000466525 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
GAPDH-206ENST00000466525 Q8N1X5 172 aa8.71□□□□□ -1.01
GAPDH-206ENST00000466525 SPINK6Q6UWN8 80 aa8.71□□□□□ -1.02
GAPDH-206ENST00000466525 LINC00313P59037 77 aa8.69□□□□□ -1.02
GAPDH-206ENST00000466525 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
GAPDH-206ENST00000466525 CIRBP-AS1Q8TBR5 109 aa8.68□□□□□ -1.02
GAPDH-206ENST00000466525 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
GAPDH-206ENST00000466525 HERC1Q15751 4861 aa8.62□□□□□ -1.03
GAPDH-206ENST00000466525 SPATA8Q6RVD6 105 aa8.62□□□□□ -1.03
GAPDH-206ENST00000466525 KRTAP16-1A8MUX0 517 aa8.61□□□□□ -1.03
GAPDH-206ENST00000466525 A0A1B0GU69 56 aa8.6□□□□□ -1.03
GAPDH-206ENST00000466525 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
GAPDH-206ENST00000466525 PLA2G1BP04054 148 aaKnown RBP8.56□□□□□ -1.04
GAPDH-206ENST00000466525 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
GAPDH-206ENST00000466525 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
GAPDH-206ENST00000466525 KRTAP13-2Q52LG2 175 aa8.54□□□□□ -1.04
GAPDH-206ENST00000466525 UQCR11O14957 56 aa8.52□□□□□ -1.05
GAPDH-206ENST00000466525 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
GAPDH-206ENST00000466525 Q6ZSA8 131 aa8.5□□□□□ -1.05
GAPDH-206ENST00000466525 MIR22HGQ0VDD5 57 aa8.49□□□□□ -1.05
GAPDH-206ENST00000466525 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
GAPDH-206ENST00000466525 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
GAPDH-206ENST00000466525 Q5VSD8 79 aa8.43□□□□□ -1.06
GAPDH-206ENST00000466525 RETNLBQ9BQ08 111 aa8.43□□□□□ -1.06
GAPDH-206ENST00000466525 J3QL48 77 aa8.4□□□□□ -1.06
GAPDH-206ENST00000466525 SPINK1P00995 79 aa8.4□□□□□ -1.06
GAPDH-206ENST00000466525 RPS29P62273 56 aaKnown RBP8.4□□□□□ -1.07
GAPDH-206ENST00000466525 FAT1Q14517 4588 aa8.37□□□□□ -1.07
GAPDH-206ENST00000466525 FLG2Q5D862 2391 aaPredicted RBP8.37□□□□□ -1.07
GAPDH-206ENST00000466525 C4orf48Q5BLP8 95 aa8.37□□□□□ -1.07
GAPDH-206ENST00000466525 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
GAPDH-206ENST00000466525 MYCBP2O75592 4640 aa8.35□□□□□ -1.07
GAPDH-206ENST00000466525 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
GAPDH-206ENST00000466525 KRTAP10-1P60331 282 aa8.32□□□□□ -1.08
GAPDH-206ENST00000466525 TYMSOSQ8TAI1 123 aa8.31□□□□□ -1.08
GAPDH-206ENST00000466525 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
GAPDH-206ENST00000466525 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
GAPDH-206ENST00000466525 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
GAPDH-206ENST00000466525 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms