RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 IGLV7-43P04211 117 aa6.1□□□□□ -1.43
PMF1-204ENST00000466489 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
PMF1-204ENST00000466489 CASC2Q6XLA1 102 aa6.1□□□□□ -1.43
PMF1-204ENST00000466489 A0A087WSZ3 146 aa6.09□□□□□ -1.43
PMF1-204ENST00000466489 K7EQZ3 153 aa6.09□□□□□ -1.43
PMF1-204ENST00000466489 OXTP01178 125 aa6.09□□□□□ -1.43
PMF1-204ENST00000466489 LIMD2Q9BT23 127 aa6.09□□□□□ -1.43
PMF1-204ENST00000466489 VPS13BQ7Z7G8 4022 aa6.09□□□□□ -1.44
PMF1-204ENST00000466489 MOBPQ13875 183 aa6.08□□□□□ -1.44
PMF1-204ENST00000466489 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
PMF1-204ENST00000466489 FP248Q71RG6 208 aaPredicted RBP6.07□□□□□ -1.44
PMF1-204ENST00000466489 ZNF861PO60384 105 aa6.06□□□□□ -1.44
PMF1-204ENST00000466489 KRTAP11-1Q8IUC1 163 aa6.06□□□□□ -1.44
PMF1-204ENST00000466489 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
PMF1-204ENST00000466489 TRAV22A0A0B4J277 110 aa6.05□□□□□ -1.44
PMF1-204ENST00000466489 FAT1Q14517 4588 aa6.04□□□□□ -1.44
PMF1-204ENST00000466489 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
PMF1-204ENST00000466489 J3QL48 77 aa6.04□□□□□ -1.44
PMF1-204ENST00000466489 PRLHP81277 87 aa6.03□□□□□ -1.44
PMF1-204ENST00000466489 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
PMF1-204ENST00000466489 C1orf64Q8NEQ6 169 aa6.03□□□□□ -1.44
PMF1-204ENST00000466489 ABCA13Q86UQ4 5058 aa6.03□□□□□ -1.44
PMF1-204ENST00000466489 H0Y9P7 68 aa6.02□□□□□ -1.45
PMF1-204ENST00000466489 LINC00208Q96KT6 92 aa6.02□□□□□ -1.45
PMF1-204ENST00000466489 CD164Q04900 197 aa6.01□□□□□ -1.45
PMF1-204ENST00000466489 WFDC13Q8IUB5 93 aa5.99□□□□□ -1.45
PMF1-204ENST00000466489 KRTAP13-1Q8IUC0 172 aa5.99□□□□□ -1.45
PMF1-204ENST00000466489 BRK1Q8WUW1 75 aa5.99□□□□□ -1.45
PMF1-204ENST00000466489 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
PMF1-204ENST00000466489 IGLV7-46A0A075B6I9 117 aa5.98□□□□□ -1.45
PMF1-204ENST00000466489 MPLKIPQ8TAP9 179 aa5.98□□□□□ -1.45
PMF1-204ENST00000466489 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
PMF1-204ENST00000466489 PKHD1L1Q86WI1 4243 aa5.95□□□□□ -1.46
PMF1-204ENST00000466489 C8orf87E5RJ46 101 aa5.95□□□□□ -1.46
PMF1-204ENST00000466489 SSBP3-AS1Q7Z2R9 100 aa5.95□□□□□ -1.46
PMF1-204ENST00000466489 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
PMF1-204ENST00000466489 A0A1B0GVX0 72 aa5.94□□□□□ -1.46
PMF1-204ENST00000466489 FAM229BQ4G0N7 80 aa5.94□□□□□ -1.46
PMF1-204ENST00000466489 MMP24-AS1A0A0U1RRL7 71 aa5.92□□□□□ -1.46
PMF1-204ENST00000466489 KRTAP1-4P0C5Y4 121 aa5.92□□□□□ -1.46
PMF1-204ENST00000466489 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
PMF1-204ENST00000466489 PRR26Q8N8Z3 221 aa5.91□□□□□ -1.46
PMF1-204ENST00000466489 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
PMF1-204ENST00000466489 MYCBP2O75592 4640 aa5.9□□□□□ -1.46
PMF1-204ENST00000466489 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
PMF1-204ENST00000466489 HERC1Q15751 4861 aa5.89□□□□□ -1.47
PMF1-204ENST00000466489 TYMSOSQ8TAI1 123 aa5.89□□□□□ -1.47
PMF1-204ENST00000466489 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
PMF1-204ENST00000466489 KRTAP10-8P60410 259 aa5.88□□□□□ -1.47
PMF1-204ENST00000466489 IGLV9-49A0A0B4J1Y8 123 aa5.87□□□□□ -1.47
PMF1-204ENST00000466489 A0A087X002 238 aa5.86□□□□□ -1.47
PMF1-204ENST00000466489 NDUFS5O43920 106 aa5.86□□□□□ -1.47
PMF1-204ENST00000466489 ATP11AUNQ6ZP68 121 aa5.86□□□□□ -1.47
PMF1-204ENST00000466489 ANAPC11Q9NYG5 84 aa5.86□□□□□ -1.47
PMF1-204ENST00000466489 ACYP2P14621 99 aa5.85□□□□□ -1.47
PMF1-204ENST00000466489 Q75L30 129 aa5.85□□□□□ -1.47
PMF1-204ENST00000466489 Q8N9P0 234 aaPredicted RBP5.85□□□□□ -1.47
PMF1-204ENST00000466489 IGHV6-1A0A0B4J1U7 121 aa5.84□□□□□ -1.47
PMF1-204ENST00000466489 CHKB-CPT1BH3BT56 60 aa5.84□□□□□ -1.47
PMF1-204ENST00000466489 C4orf48Q5BLP8 95 aa5.84□□□□□ -1.47
PMF1-204ENST00000466489 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
PMF1-204ENST00000466489 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
PMF1-204ENST00000466489 COA5Q86WW8 74 aa5.83□□□□□ -1.48
PMF1-204ENST00000466489 LINC00304Q8N9R0 145 aa5.83□□□□□ -1.48
PMF1-204ENST00000466489 Q96NJ1 140 aa5.83□□□□□ -1.48
PMF1-204ENST00000466489 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
PMF1-204ENST00000466489 SPAG11AQ6PDA7 123 aa5.82□□□□□ -1.48
PMF1-204ENST00000466489 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
PMF1-204ENST00000466489 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
PMF1-204ENST00000466489 PSPHP1O15172 72 aa5.81□□□□□ -1.48
PMF1-204ENST00000466489 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
PMF1-204ENST00000466489 A0A0G2JQZ4 141 aa5.79□□□□□ -1.48
PMF1-204ENST00000466489 PRR4Q16378 134 aa5.79□□□□□ -1.48
PMF1-204ENST00000466489 LINC00313P59037 77 aa5.78□□□□□ -1.48
PMF1-204ENST00000466489 A6NED7 52 aa5.77□□□□□ -1.49
PMF1-204ENST00000466489 A8MUN3 132 aa5.77□□□□□ -1.49
PMF1-204ENST00000466489 Q5VV11 94 aa5.77□□□□□ -1.49
PMF1-204ENST00000466489 TNXBP22105 4242 aa5.77□□□□□ -1.49
PMF1-204ENST00000466489 SPINK1P00995 79 aa5.76□□□□□ -1.49
PMF1-204ENST00000466489 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
PMF1-204ENST00000466489 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
PMF1-204ENST00000466489 PCOTHQ58A44 107 aa5.73□□□□□ -1.49
PMF1-204ENST00000466489 UBR4Q5T4S7 5183 aa5.71□□□□□ -1.49
PMF1-204ENST00000466489 SPTSSBQ8NFR3 76 aa5.71□□□□□ -1.5
PMF1-204ENST00000466489 HRES1P13985 223 aa5.69□□□□□ -1.5
PMF1-204ENST00000466489 DMAC1Q96GE9 116 aa5.69□□□□□ -1.5
PMF1-204ENST00000466489 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
PMF1-204ENST00000466489 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
PMF1-204ENST00000466489 RETNLBQ9BQ08 111 aa5.66□□□□□ -1.5
PMF1-204ENST00000466489 IGKV2-30P06310 120 aa5.64□□□□□ -1.51
PMF1-204ENST00000466489 SEC61GP60059 68 aa5.64□□□□□ -1.51
PMF1-204ENST00000466489 A0A1B0GU69 56 aa5.62□□□□□ -1.51
PMF1-204ENST00000466489 UQCR11O14957 56 aa5.6□□□□□ -1.51
PMF1-204ENST00000466489 Q5W150 140 aa5.6□□□□□ -1.51
PMF1-204ENST00000466489 TPRXLQ17RH7 258 aa5.59□□□□□ -1.51
PMF1-204ENST00000466489 LCA10Q71F78 164 aa5.59□□□□□ -1.51
PMF1-204ENST00000466489 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
PMF1-204ENST00000466489 NOTCH2NLQ7Z3S9 236 aa5.56□□□□□ -1.52
PMF1-204ENST00000466489 IGKV2D-30A0A075B6S6 120 aa5.54□□□□□ -1.52
PMF1-204ENST00000466489 A6NN06 94 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms