RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PRR4Q16378 134 aa3.95□□□□□ -1.78
CLDN4-204ENST00000466411 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
CLDN4-204ENST00000466411 IGFL1Q6UW32 110 aa3.95□□□□□ -1.78
CLDN4-204ENST00000466411 GTF2H5Q6ZYL4 71 aa3.95□□□□□ -1.78
CLDN4-204ENST00000466411 TRBV7-7A0A0K0K1E9 115 aa3.94□□□□□ -1.78
CLDN4-204ENST00000466411 PCP4L1A6NKN8 68 aa3.94□□□□□ -1.78
CLDN4-204ENST00000466411 SPCS1Q9Y6A9 102 aa3.94□□□□□ -1.78
CLDN4-204ENST00000466411 C9JAW5 83 aa3.93□□□□□ -1.78
CLDN4-204ENST00000466411 IGLV7-46A0A075B6I9 117 aa3.92□□□□□ -1.78
CLDN4-204ENST00000466411 CCKP06307 115 aa3.92□□□□□ -1.78
CLDN4-204ENST00000466411 NAA38Q9BRA0 125 aaKnown RBP3.92□□□□□ -1.78
CLDN4-204ENST00000466411 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
CLDN4-204ENST00000466411 LOC110117498A0A087WWA1 95 aa3.91□□□□□ -1.78
CLDN4-204ENST00000466411 HRCT1Q6UXD1 115 aa3.91□□□□□ -1.78
CLDN4-204ENST00000466411 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
CLDN4-204ENST00000466411 SSPOA2VEC9 5147 aa3.91□□□□□ -1.78
CLDN4-204ENST00000466411 K7EP34 96 aa3.9□□□□□ -1.79
CLDN4-204ENST00000466411 F8W1H4 67 aa3.89□□□□□ -1.79
CLDN4-204ENST00000466411 OBSCN-AS1Q96MR7 158 aa3.89□□□□□ -1.79
CLDN4-204ENST00000466411 RETNLBQ9BQ08 111 aa3.89□□□□□ -1.79
CLDN4-204ENST00000466411 A0A087WSZ3 146 aa3.88□□□□□ -1.79
CLDN4-204ENST00000466411 J3KT08 172 aa3.88□□□□□ -1.79
CLDN4-204ENST00000466411 A0A1W2PNM2 257 aa3.87□□□□□ -1.79
CLDN4-204ENST00000466411 C1orf195Q5TG92 126 aa3.87□□□□□ -1.79
CLDN4-204ENST00000466411 Q6ZQT0 140 aa3.87□□□□□ -1.79
CLDN4-204ENST00000466411 VPS25Q9BRG1 176 aa3.87□□□□□ -1.79
CLDN4-204ENST00000466411 USH2AO75445 5202 aa3.85□□□□□ -1.79
CLDN4-204ENST00000466411 A0A1B0GV72 72 aa3.85□□□□□ -1.79
CLDN4-204ENST00000466411 KRTAP13-3Q3SY46 172 aa3.85□□□□□ -1.79
CLDN4-204ENST00000466411 KRTAP4-1Q9BYQ7 146 aa3.85□□□□□ -1.79
CLDN4-204ENST00000466411 C14orf132Q9NPU4 83 aa3.85□□□□□ -1.79
CLDN4-204ENST00000466411 A0A0G2JQZ4 141 aa3.84□□□□□ -1.79
CLDN4-204ENST00000466411 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
CLDN4-204ENST00000466411 NDUFB1O75438 58 aa3.83□□□□□ -1.8
CLDN4-204ENST00000466411 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
CLDN4-204ENST00000466411 SIGMAR1Q99720 223 aa3.83□□□□□ -1.8
CLDN4-204ENST00000466411 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
CLDN4-204ENST00000466411 NREPQ16612 68 aa3.82□□□□□ -1.8
CLDN4-204ENST00000466411 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
CLDN4-204ENST00000466411 PRO0461Q9UI25 63 aa3.82□□□□□ -1.8
CLDN4-204ENST00000466411 C8orf87E5RJ46 101 aa3.81□□□□□ -1.8
CLDN4-204ENST00000466411 IGKV4-1P06312 121 aa3.81□□□□□ -1.8
CLDN4-204ENST00000466411 MT1HP80294 61 aa3.81□□□□□ -1.8
CLDN4-204ENST00000466411 MTURNQ8N3F0 131 aa3.81□□□□□ -1.8
CLDN4-204ENST00000466411 LINC00472Q9H8W2 130 aa3.81□□□□□ -1.8
CLDN4-204ENST00000466411 IGKV2-30P06310 120 aa3.8□□□□□ -1.8
CLDN4-204ENST00000466411 ACYP1P07311 99 aa3.8□□□□□ -1.8
CLDN4-204ENST00000466411 Q96NJ1 140 aa3.8□□□□□ -1.8
CLDN4-204ENST00000466411 UBL5Q9BZL1 73 aa3.8□□□□□ -1.8
CLDN4-204ENST00000466411 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
CLDN4-204ENST00000466411 A0A1B0GVX0 72 aa3.78□□□□□ -1.8
CLDN4-204ENST00000466411 A8MWP4 228 aa3.78□□□□□ -1.8
CLDN4-204ENST00000466411 LINC00313P59037 77 aa3.78□□□□□ -1.8
CLDN4-204ENST00000466411 ETDBQ3ZM63 59 aa3.78□□□□□ -1.8
CLDN4-204ENST00000466411 FAM240AA0A1B0GVK7 77 aa3.77□□□□□ -1.81
CLDN4-204ENST00000466411 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
CLDN4-204ENST00000466411 J3QR89 54 aa3.77□□□□□ -1.81
CLDN4-204ENST00000466411 Q75L30 129 aa3.77□□□□□ -1.81
CLDN4-204ENST00000466411 BPY2O14599 106 aa3.76□□□□□ -1.81
CLDN4-204ENST00000466411 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
CLDN4-204ENST00000466411 ATP11AUNQ6ZP68 121 aa3.76□□□□□ -1.81
CLDN4-204ENST00000466411 IGHV6-1A0A0B4J1U7 121 aa3.75□□□□□ -1.81
CLDN4-204ENST00000466411 ATP5EP2Q5VTU8 51 aa3.74□□□□□ -1.81
CLDN4-204ENST00000466411 Q6ZVQ6 151 aa3.74□□□□□ -1.81
CLDN4-204ENST00000466411 PRR15Q8IV56 129 aa3.74□□□□□ -1.81
CLDN4-204ENST00000466411 C20orf166-AS1Q96NR2 134 aa3.74□□□□□ -1.81
CLDN4-204ENST00000466411 A0A1B0GV90 55 aa3.73□□□□□ -1.81
CLDN4-204ENST00000466411 A8MUU9 505 aa3.73□□□□□ -1.81
CLDN4-204ENST00000466411 CXCL6P80162 114 aa3.73□□□□□ -1.81
CLDN4-204ENST00000466411 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
CLDN4-204ENST00000466411 Q8N9P0 234 aaPredicted RBP3.73□□□□□ -1.81
CLDN4-204ENST00000466411 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
CLDN4-204ENST00000466411 FLGP20930 4061 aaPredicted RBP3.71□□□□□ -1.82
CLDN4-204ENST00000466411 DSCR10P59022 87 aa3.71□□□□□ -1.82
CLDN4-204ENST00000466411 TMEM254Q8TBM7 123 aa3.71□□□□□ -1.82
CLDN4-204ENST00000466411 C8orf17Q9NRJ1 99 aa3.71□□□□□ -1.82
CLDN4-204ENST00000466411 LINC00846Q9NV44 126 aa3.71□□□□□ -1.82
CLDN4-204ENST00000466411 IGKV3D-7A0A0C4DH55 119 aa3.7□□□□□ -1.82
CLDN4-204ENST00000466411 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
CLDN4-204ENST00000466411 K7EQZ3 153 aa3.69□□□□□ -1.82
CLDN4-204ENST00000466411 PCOTHQ58A44 107 aa3.69□□□□□ -1.82
CLDN4-204ENST00000466411 KRTAP16-1A8MUX0 517 aa3.68□□□□□ -1.82
CLDN4-204ENST00000466411 MRPL34Q9BQ48 92 aaKnown RBP3.68□□□□□ -1.82
CLDN4-204ENST00000466411 K7ERU9 68 aa3.67□□□□□ -1.82
CLDN4-204ENST00000466411 CASC2Q6XLA1 102 aa3.67□□□□□ -1.82
CLDN4-204ENST00000466411 NEBP20929 6669 aa3.67□□□□□ -1.82
CLDN4-204ENST00000466411 MMP24-AS1A0A0U1RRL7 71 aa3.66□□□□□ -1.82
CLDN4-204ENST00000466411 HCG22E2RYF7 251 aa3.66□□□□□ -1.82
CLDN4-204ENST00000466411 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
CLDN4-204ENST00000466411 LINC00643Q86TS7 51 aa3.66□□□□□ -1.82
CLDN4-204ENST00000466411 ZCCHC13Q8WW36 166 aaKnown RBP3.65□□□□□ -1.83
CLDN4-204ENST00000466411 TP53AIP1Q9HCN2 124 aa3.65□□□□□ -1.83
CLDN4-204ENST00000466411 NDUFS5O43920 106 aa3.64□□□□□ -1.83
CLDN4-204ENST00000466411 NOTCH2NLQ7Z3S9 236 aa3.64□□□□□ -1.83
CLDN4-204ENST00000466411 IGKV2D-30A0A075B6S6 120 aa3.62□□□□□ -1.83
CLDN4-204ENST00000466411 HIST1H4AP62805 103 aaKnown RBP3.61□□□□□ -1.83
CLDN4-204ENST00000466411 WFDC13Q8IUB5 93 aa3.61□□□□□ -1.83
CLDN4-204ENST00000466411 Q8N9L7 120 aa3.61□□□□□ -1.83
CLDN4-204ENST00000466411 RBM12B-AS1Q9P1G2 102 aa3.61□□□□□ -1.83
CLDN4-204ENST00000466411 COX6B2Q6YFQ2 88 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms