RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 H3BPC8 53 aa11.05□□□□□ -0.64
CAPN3-209ENST00000466222 Q5VSD8 79 aa11.05□□□□□ -0.64
CAPN3-209ENST00000466222 ZNF706Q9Y5V0 76 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-209ENST00000466222 IGLV9-49A0A0B4J1Y8 123 aa11.04□□□□□ -0.64
CAPN3-209ENST00000466222 FAM229AH3BQW9 127 aa11.04□□□□□ -0.64
CAPN3-209ENST00000466222 CASC2Q6XLA1 102 aa11.03□□□□□ -0.64
CAPN3-209ENST00000466222 KRTAP1-4P0C5Y4 121 aa11.03□□□□□ -0.64
CAPN3-209ENST00000466222 CYP4F30PQ9H0H9 118 aa11.02□□□□□ -0.65
CAPN3-209ENST00000466222 SPINK6Q6UWN8 80 aa11.01□□□□□ -0.65
CAPN3-209ENST00000466222 hDV103S1A0JD37 113 aa11.01□□□□□ -0.65
CAPN3-209ENST00000466222 A0A087X002 238 aa11□□□□□ -0.65
CAPN3-209ENST00000466222 BIRC6Q9NR09 4857 aa11□□□□□ -0.65
CAPN3-209ENST00000466222 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
CAPN3-209ENST00000466222 FAM229BQ4G0N7 80 aa10.98□□□□□ -0.65
CAPN3-209ENST00000466222 TRAV22A0A0B4J277 110 aa10.97□□□□□ -0.65
CAPN3-209ENST00000466222 MOBPQ13875 183 aa10.96□□□□□ -0.65
CAPN3-209ENST00000466222 KRTAP13-2Q52LG2 175 aa10.95□□□□□ -0.66
CAPN3-209ENST00000466222 Q8N1X5 172 aa10.95□□□□□ -0.66
CAPN3-209ENST00000466222 LRP1Q07954 4544 aaKnown RBP10.94□□□□□ -0.66
CAPN3-209ENST00000466222 H0Y9P7 68 aa10.94□□□□□ -0.66
CAPN3-209ENST00000466222 C1orf64Q8NEQ6 169 aa10.93□□□□□ -0.66
CAPN3-209ENST00000466222 LINC00208Q96KT6 92 aa10.93□□□□□ -0.66
CAPN3-209ENST00000466222 MMP24-AS1A0A0U1RRL7 71 aa10.92□□□□□ -0.66
CAPN3-209ENST00000466222 SPANXA2-OT1Q8N9U9 137 aa10.92□□□□□ -0.66
CAPN3-209ENST00000466222 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
CAPN3-209ENST00000466222 MYCBP2O75592 4640 aa10.91□□□□□ -0.66
CAPN3-209ENST00000466222 PRO0628Q9UI54 55 aa10.91□□□□□ -0.66
CAPN3-209ENST00000466222 KRTAP4-5Q9BYR2 181 aa10.9□□□□□ -0.66
CAPN3-209ENST00000466222 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.67
CAPN3-209ENST00000466222 MPLKIPQ8TAP9 179 aa10.88□□□□□ -0.67
CAPN3-209ENST00000466222 Q96NJ1 140 aa10.88□□□□□ -0.67
CAPN3-209ENST00000466222 ASB16-AS1Q495Z4 193 aa10.86□□□□□ -0.67
CAPN3-209ENST00000466222 TP53AIP1Q9HCN2 124 aa10.86□□□□□ -0.67
CAPN3-209ENST00000466222 Q1T7F1 81 aa10.86□□□□□ -0.67
CAPN3-209ENST00000466222 HERC2O95714 4834 aa10.85□□□□□ -0.67
CAPN3-209ENST00000466222 ABCA13Q86UQ4 5058 aa10.82□□□□□ -0.68
CAPN3-209ENST00000466222 TYMSOSQ8TAI1 123 aa10.81□□□□□ -0.68
CAPN3-209ENST00000466222 C8orf17Q9NRJ1 99 aa10.81□□□□□ -0.68
CAPN3-209ENST00000466222 FAT3Q8TDW7 4589 aa10.81□□□□□ -0.68
CAPN3-209ENST00000466222 SSBP3-AS1Q7Z2R9 100 aa10.8□□□□□ -0.68
CAPN3-209ENST00000466222 V9GYY9 64 aa10.79□□□□□ -0.68
CAPN3-209ENST00000466222 A0A1B0GVX0 72 aa10.78□□□□□ -0.68
CAPN3-209ENST00000466222 PRR4Q16378 134 aa10.78□□□□□ -0.68
CAPN3-209ENST00000466222 FLG2Q5D862 2391 aaPredicted RBP10.77□□□□□ -0.68
CAPN3-209ENST00000466222 TNXBP22105 4242 aa10.77□□□□□ -0.68
CAPN3-209ENST00000466222 BRK1Q8WUW1 75 aa10.73□□□□□ -0.69
CAPN3-209ENST00000466222 IGLV7-46A0A075B6I9 117 aa10.71□□□□□ -0.69
CAPN3-209ENST00000466222 IGHV6-1A0A0B4J1U7 121 aa10.7□□□□□ -0.7
CAPN3-209ENST00000466222 CD164Q04900 197 aa10.7□□□□□ -0.7
CAPN3-209ENST00000466222 MRPL34Q9BQ48 92 aaKnown RBP10.7□□□□□ -0.7
CAPN3-209ENST00000466222 C1orf195Q5TG92 126 aa10.68□□□□□ -0.7
CAPN3-209ENST00000466222 KRTAP10-8P60410 259 aa10.67□□□□□ -0.7
CAPN3-209ENST00000466222 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
CAPN3-209ENST00000466222 NDUFS5O43920 106 aa10.64□□□□□ -0.71
CAPN3-209ENST00000466222 C4orf48Q5BLP8 95 aa10.63□□□□□ -0.71
CAPN3-209ENST00000466222 MT1HL1P0DM35 61 aa10.62□□□□□ -0.71
CAPN3-209ENST00000466222 LIMD2Q9BT23 127 aa10.62□□□□□ -0.71
CAPN3-209ENST00000466222 SPINK1P00995 79 aa10.59□□□□□ -0.71
CAPN3-209ENST00000466222 COA5Q86WW8 74 aa10.59□□□□□ -0.71
CAPN3-209ENST00000466222 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
CAPN3-209ENST00000466222 Q8N9P0 234 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-209ENST00000466222 PCLOQ9Y6V0 5065 aa10.58□□□□□ -0.72
CAPN3-209ENST00000466222 PSPHP1O15172 72 aa10.58□□□□□ -0.72
CAPN3-209ENST00000466222 PCOTHQ58A44 107 aa10.58□□□□□ -0.72
CAPN3-209ENST00000466222 LOC101927531A0A1B0GV80 90 aa10.56□□□□□ -0.72
CAPN3-209ENST00000466222 SPAG11AQ6PDA7 123 aa10.54□□□□□ -0.72
CAPN3-209ENST00000466222 A8MUN3 132 aa10.54□□□□□ -0.72
CAPN3-209ENST00000466222 NOTCH2NLQ7Z3S9 236 aa10.54□□□□□ -0.72
CAPN3-209ENST00000466222 Q5VV11 94 aa10.51□□□□□ -0.73
CAPN3-209ENST00000466222 RETNLBQ9BQ08 111 aa10.5□□□□□ -0.73
CAPN3-209ENST00000466222 KRTAP13-3Q3SY46 172 aa10.48□□□□□ -0.73
CAPN3-209ENST00000466222 DMBT1Q9UGM3 2413 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-209ENST00000466222 RPS29P62273 56 aaKnown RBP10.47□□□□□ -0.73
CAPN3-209ENST00000466222 PRR15LQ9BU68 103 aa10.45□□□□□ -0.74
CAPN3-209ENST00000466222 Q75L30 129 aa10.44□□□□□ -0.74
CAPN3-209ENST00000466222 Q5W150 140 aa10.42□□□□□ -0.74
CAPN3-209ENST00000466222 LINC01558Q9Y6Z2 57 aa10.42□□□□□ -0.74
CAPN3-209ENST00000466222 HRES1P13985 223 aa10.41□□□□□ -0.74
CAPN3-209ENST00000466222 LINC00313P59037 77 aa10.41□□□□□ -0.74
CAPN3-209ENST00000466222 CHKB-CPT1BH3BT56 60 aa10.41□□□□□ -0.74
CAPN3-209ENST00000466222 J3QL48 77 aa10.37□□□□□ -0.75
CAPN3-209ENST00000466222 ACYP2P14621 99 aa10.33□□□□□ -0.76
CAPN3-209ENST00000466222 HERC1Q15751 4861 aa10.32□□□□□ -0.76
CAPN3-209ENST00000466222 A6NED7 52 aa10.28□□□□□ -0.76
CAPN3-209ENST00000466222 DMAC1Q96GE9 116 aa10.28□□□□□ -0.76
CAPN3-209ENST00000466222 KRTAP16-1A8MUX0 517 aa10.27□□□□□ -0.76
CAPN3-209ENST00000466222 IGKV2-30P06310 120 aa10.27□□□□□ -0.76
CAPN3-209ENST00000466222 C9orf92A6NGG3 77 aa10.25□□□□□ -0.77
CAPN3-209ENST00000466222 CDC42SE1Q9NRR8 79 aa10.23□□□□□ -0.77
CAPN3-209ENST00000466222 ATP11AUNQ6ZP68 121 aa10.22□□□□□ -0.77
CAPN3-209ENST00000466222 PMAIP1Q13794 54 aa10.2□□□□□ -0.78
CAPN3-209ENST00000466222 LCA10Q71F78 164 aa10.2□□□□□ -0.78
CAPN3-209ENST00000466222 LPAP08519 4548 aa10.2□□□□□ -0.78
CAPN3-209ENST00000466222 A8MU10 97 aa10.17□□□□□ -0.78
CAPN3-209ENST00000466222 SPTSSBQ8NFR3 76 aa10.09□□□□□ -0.79
CAPN3-209ENST00000466222 SPINK7P58062 85 aa10.08□□□□□ -0.8
CAPN3-209ENST00000466222 HMCN2Q8NDA2 5059 aa10.06□□□□□ -0.8
CAPN3-209ENST00000466222 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
CAPN3-209ENST00000466222 LRP2P98164 4655 aa10.04□□□□□ -0.8
CAPN3-209ENST00000466222 A6NN06 94 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms