RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 A0A0G2JQZ4 141 aa8.12□□□□□ -1.11
HDAC6-215ENST00000465457 A0A0U1RQV1 116 aa8.11□□□□□ -1.11
HDAC6-215ENST00000465457 IGKV4-1P06312 121 aa8.11□□□□□ -1.11
HDAC6-215ENST00000465457 DSCR10P59022 87 aa8.07□□□□□ -1.12
HDAC6-215ENST00000465457 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
HDAC6-215ENST00000465457 ANAPC11Q9NYG5 84 aa8.07□□□□□ -1.12
HDAC6-215ENST00000465457 SERP2Q8N6R1 65 aa8.06□□□□□ -1.12
HDAC6-215ENST00000465457 LINC00472Q9H8W2 130 aa8.06□□□□□ -1.12
HDAC6-215ENST00000465457 UQCRQO14949 82 aa8.05□□□□□ -1.12
HDAC6-215ENST00000465457 COX7CP15954 63 aa8.04□□□□□ -1.12
HDAC6-215ENST00000465457 PRR4Q16378 134 aa8.04□□□□□ -1.12
HDAC6-215ENST00000465457 Q8N9L7 120 aa8.04□□□□□ -1.12
HDAC6-215ENST00000465457 A8MWP4 228 aa8.03□□□□□ -1.12
HDAC6-215ENST00000465457 K7EQZ3 153 aa8.03□□□□□ -1.12
HDAC6-215ENST00000465457 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
HDAC6-215ENST00000465457 TRAV7A0A075B6U4 112 aa8.02□□□□□ -1.13
HDAC6-215ENST00000465457 NDUFB1O75438 58 aa8.02□□□□□ -1.13
HDAC6-215ENST00000465457 ASB16-AS1Q495Z4 193 aa8.01□□□□□ -1.13
HDAC6-215ENST00000465457 HRCT1Q6UXD1 115 aa8.01□□□□□ -1.13
HDAC6-215ENST00000465457 HCG22E2RYF7 251 aa8□□□□□ -1.13
HDAC6-215ENST00000465457 Q5XG85 94 aa8□□□□□ -1.13
HDAC6-215ENST00000465457 PRR15Q8IV56 129 aa8□□□□□ -1.13
HDAC6-215ENST00000465457 A0A087X002 238 aa7.99□□□□□ -1.13
HDAC6-215ENST00000465457 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
HDAC6-215ENST00000465457 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
HDAC6-215ENST00000465457 LIMD2Q9BT23 127 aa7.98□□□□□ -1.13
HDAC6-215ENST00000465457 DEFB116Q30KQ4 102 aa7.97□□□□□ -1.13
HDAC6-215ENST00000465457 Q96NJ1 140 aa7.97□□□□□ -1.13
HDAC6-215ENST00000465457 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
HDAC6-215ENST00000465457 CCDC179H3BU77 68 aa7.96□□□□□ -1.14
HDAC6-215ENST00000465457 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
HDAC6-215ENST00000465457 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
HDAC6-215ENST00000465457 SPAG11AQ6PDA7 123 aa7.93□□□□□ -1.14
HDAC6-215ENST00000465457 A0A1B0GVX0 72 aa7.92□□□□□ -1.14
HDAC6-215ENST00000465457 SPINK1P00995 79 aa7.92□□□□□ -1.14
HDAC6-215ENST00000465457 CASC2Q6XLA1 102 aa7.92□□□□□ -1.14
HDAC6-215ENST00000465457 OCR1Q9BZK8 76 aa7.92□□□□□ -1.14
HDAC6-215ENST00000465457 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
HDAC6-215ENST00000465457 WFDC13Q8IUB5 93 aa7.87□□□□□ -1.15
HDAC6-215ENST00000465457 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
HDAC6-215ENST00000465457 C8orf17Q9NRJ1 99 aa7.87□□□□□ -1.15
HDAC6-215ENST00000465457 hDV103S1A0JD37 113 aa7.86□□□□□ -1.15
HDAC6-215ENST00000465457 C8orf87E5RJ46 101 aa7.86□□□□□ -1.15
HDAC6-215ENST00000465457 KLKP1Q107X0 134 aa7.85□□□□□ -1.15
HDAC6-215ENST00000465457 C20orf197Q8N268 126 aa7.85□□□□□ -1.15
HDAC6-215ENST00000465457 IGHV6-1A0A0B4J1U7 121 aa7.84□□□□□ -1.15
HDAC6-215ENST00000465457 C5orf47Q569G3 176 aa7.84□□□□□ -1.15
HDAC6-215ENST00000465457 NDUFC1O43677 76 aa7.83□□□□□ -1.16
HDAC6-215ENST00000465457 C1orf195Q5TG92 126 aa7.83□□□□□ -1.16
HDAC6-215ENST00000465457 TMEM254Q8TBM7 123 aa7.83□□□□□ -1.16
HDAC6-215ENST00000465457 TP53AIP1Q9HCN2 124 aa7.83□□□□□ -1.16
HDAC6-215ENST00000465457 H3BPC8 53 aa7.79□□□□□ -1.16
HDAC6-215ENST00000465457 MP68P56378 58 aa7.79□□□□□ -1.16
HDAC6-215ENST00000465457 TMEM258P61165 79 aa7.79□□□□□ -1.16
HDAC6-215ENST00000465457 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
HDAC6-215ENST00000465457 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
HDAC6-215ENST00000465457 LINC00313P59037 77 aa7.75□□□□□ -1.17
HDAC6-215ENST00000465457 TRAV22A0A0B4J277 110 aa7.73□□□□□ -1.17
HDAC6-215ENST00000465457 SNURFQ9Y675 71 aa7.73□□□□□ -1.17
HDAC6-215ENST00000465457 H0Y9P7 68 aa7.71□□□□□ -1.18
HDAC6-215ENST00000465457 H7BZZ5 65 aa7.71□□□□□ -1.18
HDAC6-215ENST00000465457 NDUFS5O43920 106 aa7.71□□□□□ -1.18
HDAC6-215ENST00000465457 ATP5EP56381 51 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-215ENST00000465457 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.18
HDAC6-215ENST00000465457 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
HDAC6-215ENST00000465457 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
HDAC6-215ENST00000465457 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
HDAC6-215ENST00000465457 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
HDAC6-215ENST00000465457 Q8N9P0 234 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-215ENST00000465457 FAM236DA0A1B0GTK5 79 aa7.66□□□□□ -1.18
HDAC6-215ENST00000465457 FAM236CP0DP71 79 aa7.66□□□□□ -1.18
HDAC6-215ENST00000465457 LINC00208Q96KT6 92 aa7.65□□□□□ -1.18
HDAC6-215ENST00000465457 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
HDAC6-215ENST00000465457 IGLV7-46A0A075B6I9 117 aa7.63□□□□□ -1.19
HDAC6-215ENST00000465457 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
HDAC6-215ENST00000465457 LOC101927531A0A1B0GV80 90 aa7.61□□□□□ -1.19
HDAC6-215ENST00000465457 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
HDAC6-215ENST00000465457 FP248Q71RG6 208 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-215ENST00000465457 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
HDAC6-215ENST00000465457 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
HDAC6-215ENST00000465457 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
HDAC6-215ENST00000465457 KRTAP9-7A8MTY7 169 aa7.54□□□□□ -1.2
HDAC6-215ENST00000465457 SERP1Q9Y6X1 66 aa7.54□□□□□ -1.2
HDAC6-215ENST00000465457 Q5W150 140 aa7.51□□□□□ -1.21
HDAC6-215ENST00000465457 CYP4F30PQ9H0H9 118 aa7.51□□□□□ -1.21
HDAC6-215ENST00000465457 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
HDAC6-215ENST00000465457 C20orf166-AS1Q96NR2 134 aa7.5□□□□□ -1.21
HDAC6-215ENST00000465457 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-215ENST00000465457 MT1HP80294 61 aa7.49□□□□□ -1.21
HDAC6-215ENST00000465457 A8MUU9 505 aa7.48□□□□□ -1.21
HDAC6-215ENST00000465457 IGKV2-30P06310 120 aa7.46□□□□□ -1.22
HDAC6-215ENST00000465457 C9orf92A6NGG3 77 aa7.45□□□□□ -1.22
HDAC6-215ENST00000465457 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-215ENST00000465457 PCOTHQ58A44 107 aa7.44□□□□□ -1.22
HDAC6-215ENST00000465457 Q75L30 129 aa7.44□□□□□ -1.22
HDAC6-215ENST00000465457 KRTAP10-6P60371 365 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-215ENST00000465457 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
HDAC6-215ENST00000465457 C7orf65Q6ZTY9 151 aa7.4□□□□□ -1.22
HDAC6-215ENST00000465457 SSPOA2VEC9 5147 aa7.37□□□□□ -1.23
HDAC6-215ENST00000465457 IGKV2D-30A0A075B6S6 120 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms