RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 SERP2Q8N6R1 65 aa4.95□□□□□ -1.62
UBE4B-205ENST00000465408 K7EQZ3 153 aa4.94□□□□□ -1.62
UBE4B-205ENST00000465408 UQCRQO14949 82 aa4.93□□□□□ -1.62
UBE4B-205ENST00000465408 RPL37AP61513 92 aaKnown RBP4.93□□□□□ -1.62
UBE4B-205ENST00000465408 TRAV7A0A075B6U4 112 aa4.91□□□□□ -1.62
UBE4B-205ENST00000465408 PLA2G1BP04054 148 aaKnown RBP4.9□□□□□ -1.63
UBE4B-205ENST00000465408 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.63
UBE4B-205ENST00000465408 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
UBE4B-205ENST00000465408 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
UBE4B-205ENST00000465408 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
UBE4B-205ENST00000465408 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
UBE4B-205ENST00000465408 SS18L2Q9UHA2 77 aa4.88□□□□□ -1.63
UBE4B-205ENST00000465408 LPAP08519 4548 aa4.87□□□□□ -1.63
UBE4B-205ENST00000465408 A0A087X002 238 aa4.87□□□□□ -1.63
UBE4B-205ENST00000465408 HCG22E2RYF7 251 aa4.87□□□□□ -1.63
UBE4B-205ENST00000465408 KRTAP13-2Q52LG2 175 aa4.87□□□□□ -1.63
UBE4B-205ENST00000465408 WFDC13Q8IUB5 93 aa4.87□□□□□ -1.63
UBE4B-205ENST00000465408 C20orf197Q8N268 126 aa4.87□□□□□ -1.63
UBE4B-205ENST00000465408 Q96NJ1 140 aa4.87□□□□□ -1.63
UBE4B-205ENST00000465408 A8MWP4 228 aa4.86□□□□□ -1.63
UBE4B-205ENST00000465408 A0A0U1RQV1 116 aa4.85□□□□□ -1.63
UBE4B-205ENST00000465408 H3BS24 57 aa4.85□□□□□ -1.63
UBE4B-205ENST00000465408 J3KT08 172 aa4.85□□□□□ -1.63
UBE4B-205ENST00000465408 SSBP3-AS1Q7Z2R9 100 aa4.85□□□□□ -1.63
UBE4B-205ENST00000465408 PRR15Q8IV56 129 aa4.85□□□□□ -1.63
UBE4B-205ENST00000465408 OCR1Q9BZK8 76 aa4.85□□□□□ -1.63
UBE4B-205ENST00000465408 KRTAP1-4P0C5Y4 121 aa4.84□□□□□ -1.63
UBE4B-205ENST00000465408 KRTAP10-4P60372 401 aaPredicted RBP4.84□□□□□ -1.63
UBE4B-205ENST00000465408 FAM229BQ4G0N7 80 aa4.84□□□□□ -1.63
UBE4B-205ENST00000465408 SNURFQ9Y675 71 aa4.84□□□□□ -1.63
UBE4B-205ENST00000465408 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
UBE4B-205ENST00000465408 CASC2Q6XLA1 102 aa4.83□□□□□ -1.64
UBE4B-205ENST00000465408 MMP24-AS1A0A0U1RRL7 71 aa4.82□□□□□ -1.64
UBE4B-205ENST00000465408 NDUFB1O75438 58 aa4.82□□□□□ -1.64
UBE4B-205ENST00000465408 SPINK6Q6UWN8 80 aa4.82□□□□□ -1.64
UBE4B-205ENST00000465408 CD164Q04900 197 aa4.81□□□□□ -1.64
UBE4B-205ENST00000465408 IGHV6-1A0A0B4J1U7 121 aa4.8□□□□□ -1.64
UBE4B-205ENST00000465408 TMEM254Q8TBM7 123 aa4.8□□□□□ -1.64
UBE4B-205ENST00000465408 A0A1B0GVX0 72 aa4.79□□□□□ -1.64
UBE4B-205ENST00000465408 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
UBE4B-205ENST00000465408 KLKP1Q107X0 134 aa4.78□□□□□ -1.64
UBE4B-205ENST00000465408 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
UBE4B-205ENST00000465408 TYMSOSQ8TAI1 123 aa4.78□□□□□ -1.64
UBE4B-205ENST00000465408 hDV103S1A0JD37 113 aa4.77□□□□□ -1.65
UBE4B-205ENST00000465408 TMEM258P61165 79 aa4.77□□□□□ -1.65
UBE4B-205ENST00000465408 H7BZZ5 65 aa4.76□□□□□ -1.65
UBE4B-205ENST00000465408 ASB16-AS1Q495Z4 193 aa4.76□□□□□ -1.65
UBE4B-205ENST00000465408 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
UBE4B-205ENST00000465408 FAM236DA0A1B0GTK5 79 aa4.74□□□□□ -1.65
UBE4B-205ENST00000465408 FAM236CP0DP71 79 aa4.74□□□□□ -1.65
UBE4B-205ENST00000465408 C1orf195Q5TG92 126 aa4.74□□□□□ -1.65
UBE4B-205ENST00000465408 H0Y9P7 68 aa4.73□□□□□ -1.65
UBE4B-205ENST00000465408 NDUFS5O43920 106 aa4.73□□□□□ -1.65
UBE4B-205ENST00000465408 C5orf47Q569G3 176 aa4.73□□□□□ -1.65
UBE4B-205ENST00000465408 Q5XG85 94 aa4.73□□□□□ -1.65
UBE4B-205ENST00000465408 ZCCHC13Q8WW36 166 aaKnown RBP4.73□□□□□ -1.65
UBE4B-205ENST00000465408 LIMD2Q9BT23 127 aa4.73□□□□□ -1.65
UBE4B-205ENST00000465408 NDUFC1O43677 76 aa4.72□□□□□ -1.65
UBE4B-205ENST00000465408 MP68P56378 58 aa4.72□□□□□ -1.65
UBE4B-205ENST00000465408 LINC00304Q8N9R0 145 aa4.72□□□□□ -1.65
UBE4B-205ENST00000465408 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
UBE4B-205ENST00000465408 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
UBE4B-205ENST00000465408 C8orf87E5RJ46 101 aa4.7□□□□□ -1.66
UBE4B-205ENST00000465408 SPINK1P00995 79 aa4.69□□□□□ -1.66
UBE4B-205ENST00000465408 TRAV22A0A0B4J277 110 aa4.68□□□□□ -1.66
UBE4B-205ENST00000465408 TP53AIP1Q9HCN2 124 aa4.68□□□□□ -1.66
UBE4B-205ENST00000465408 LINC00313P59037 77 aa4.67□□□□□ -1.66
UBE4B-205ENST00000465408 SPAG11AQ6PDA7 123 aa4.67□□□□□ -1.66
UBE4B-205ENST00000465408 C1orf64Q8NEQ6 169 aa4.67□□□□□ -1.66
UBE4B-205ENST00000465408 H3BPC8 53 aa4.66□□□□□ -1.66
UBE4B-205ENST00000465408 ATP5EP56381 51 aaPredicted RBP4.65□□□□□ -1.67
UBE4B-205ENST00000465408 PRR4Q16378 134 aa4.65□□□□□ -1.67
UBE4B-205ENST00000465408 KRTAP16-1A8MUX0 517 aa4.64□□□□□ -1.67
UBE4B-205ENST00000465408 RPS29P62273 56 aaKnown RBP4.64□□□□□ -1.67
UBE4B-205ENST00000465408 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
UBE4B-205ENST00000465408 RETNLBQ9BQ08 111 aa4.64□□□□□ -1.67
UBE4B-205ENST00000465408 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
UBE4B-205ENST00000465408 Q5W150 140 aa4.63□□□□□ -1.67
UBE4B-205ENST00000465408 PCOTHQ58A44 107 aa4.62□□□□□ -1.67
UBE4B-205ENST00000465408 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
UBE4B-205ENST00000465408 KRTAP13-3Q3SY46 172 aa4.61□□□□□ -1.67
UBE4B-205ENST00000465408 Q8N9P0 234 aaPredicted RBP4.61□□□□□ -1.67
UBE4B-205ENST00000465408 C9orf92A6NGG3 77 aa4.58□□□□□ -1.68
UBE4B-205ENST00000465408 KRTAP10-8P60410 259 aa4.58□□□□□ -1.68
UBE4B-205ENST00000465408 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
UBE4B-205ENST00000465408 SPANXA2-OT1Q8N9U9 137 aa4.57□□□□□ -1.68
UBE4B-205ENST00000465408 CYP4F30PQ9H0H9 118 aa4.57□□□□□ -1.68
UBE4B-205ENST00000465408 SSPOA2VEC9 5147 aa4.57□□□□□ -1.68
UBE4B-205ENST00000465408 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
UBE4B-205ENST00000465408 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
UBE4B-205ENST00000465408 SMIM26A0A096LP01 95 aa4.53□□□□□ -1.68
UBE4B-205ENST00000465408 IGKV2-30P06310 120 aa4.53□□□□□ -1.68
UBE4B-205ENST00000465408 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
UBE4B-205ENST00000465408 FP248Q71RG6 208 aaPredicted RBP4.52□□□□□ -1.69
UBE4B-205ENST00000465408 A8MUU9 505 aa4.5□□□□□ -1.69
UBE4B-205ENST00000465408 HRES1P13985 223 aa4.5□□□□□ -1.69
UBE4B-205ENST00000465408 C4orf26Q17RF5 130 aa4.49□□□□□ -1.69
UBE4B-205ENST00000465408 COA5Q86WW8 74 aa4.49□□□□□ -1.69
UBE4B-205ENST00000465408 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
UBE4B-205ENST00000465408 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms