RNA–Protein interactions for RNA: ENST00000465379.1

SP3-205, Transcript of Sp3 transcription factor, humanhuman

TSL 1 (best)

Gene SP3, Length 5,489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-205ENST00000465379 ZNF469Q96JG9 3925 aaPredicted RBP1.68□□□□□ -2.14
SP3-205ENST00000465379 ASPMQ8IZT6 3477 aa1.66□□□□□ -2.14
SP3-205ENST00000465379 DSCAML1Q8TD84 2053 aa1.66□□□□□ -2.14
SP3-205ENST00000465379 CHD8Q9HCK8 2581 aa1.66□□□□□ -2.14
SP3-205ENST00000465379 KRTAP7-1Q8IUC3 87 aa1.66□□□□□ -2.14
SP3-205ENST00000465379 KRTAP20-1Q3LI63 56 aa1.66□□□□□ -2.14
SP3-205ENST00000465379 IGF2RP11717 2491 aa1.65□□□□□ -2.15
SP3-205ENST00000465379 UTRNP46939 3433 aa1.65□□□□□ -2.15
SP3-205ENST00000465379 CDH23Q9H251 3354 aa1.65□□□□□ -2.15
SP3-205ENST00000465379 USP9XQ93008 2570 aaPredicted RBP1.64□□□□□ -2.15
SP3-205ENST00000465379 MT1HL1P0DM35 61 aa1.64□□□□□ -2.15
SP3-205ENST00000465379 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
SP3-205ENST00000465379 FAT2Q9NYQ8 4349 aa1.64□□□□□ -2.15
SP3-205ENST00000465379 ALMS1Q8TCU4 4167 aa1.64□□□□□ -2.15
SP3-205ENST00000465379 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
SP3-205ENST00000465379 RANBP2P49792 3224 aaKnown RBP1.62□□□□□ -2.15
SP3-205ENST00000465379 FASNP49327 2511 aaKnown RBP1.62□□□□□ -2.15
SP3-205ENST00000465379 EPG5Q9HCE0 2579 aa1.62□□□□□ -2.15
SP3-205ENST00000465379 KRTAP10-4P60372 401 aaPredicted RBP1.62□□□□□ -2.15
SP3-205ENST00000465379 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
SP3-205ENST00000465379 LAMA2P24043 3122 aaKnown RBP1.6□□□□□ -2.15
SP3-205ENST00000465379 MYO18BQ8IUG5 2567 aa1.6□□□□□ -2.15
SP3-205ENST00000465379 PCNTO95613 3336 aa1.58□□□□□ -2.16
SP3-205ENST00000465379 JMJD1CQ15652 2540 aa1.58□□□□□ -2.16
SP3-205ENST00000465379 CELSR3Q9NYQ7 3312 aa1.58□□□□□ -2.16
SP3-205ENST00000465379 ZFYVE26Q68DK2 2539 aa1.58□□□□□ -2.16
SP3-205ENST00000465379 SVEP1Q4LDE5 3571 aa1.58□□□□□ -2.16
SP3-205ENST00000465379 BAHCC1Q9P281 2608 aa1.58□□□□□ -2.16
SP3-205ENST00000465379 ABCA12Q86UK0 2595 aa1.57□□□□□ -2.16
SP3-205ENST00000465379 SZT2Q5T011 3432 aa1.57□□□□□ -2.16
SP3-205ENST00000465379 SPTBN4Q9H254 2564 aa1.56□□□□□ -2.16
SP3-205ENST00000465379 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
SP3-205ENST00000465379 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
SP3-205ENST00000465379 BDP1A6H8Y1 2624 aa1.55□□□□□ -2.16
SP3-205ENST00000465379 KRTAP5-9P26371 169 aa1.54□□□□□ -2.16
SP3-205ENST00000465379 SPEGQ15772 3267 aa1.54□□□□□ -2.16
SP3-205ENST00000465379 LCE1AQ5T7P2 110 aa1.53□□□□□ -2.16
SP3-205ENST00000465379 KRTAP12-1P59990 96 aa1.53□□□□□ -2.16
SP3-205ENST00000465379 MT1HP80294 61 aa1.53□□□□□ -2.16
SP3-205ENST00000465379 SPRR5A0A1B0GTR4 108 aa1.53□□□□□ -2.16
SP3-205ENST00000465379 VCANP13611 3396 aa1.52□□□□□ -2.17
SP3-205ENST00000465379 DNAH1Q9P2D7 4330 aa1.52□□□□□ -2.17
SP3-205ENST00000465379 XIRP2A4UGR9 3374 aa1.52□□□□□ -2.17
SP3-205ENST00000465379 KRTAP10-5P60370 271 aa1.51□□□□□ -2.17
SP3-205ENST00000465379 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
SP3-205ENST00000465379 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
SP3-205ENST00000465379 TLN1Q9Y490 2541 aaKnown RBP1.5□□□□□ -2.17
SP3-205ENST00000465379 TLN2Q9Y4G6 2542 aa1.49□□□□□ -2.17
SP3-205ENST00000465379 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
SP3-205ENST00000465379 MGAM2Q2M2H8 2515 aa1.48□□□□□ -2.17
SP3-205ENST00000465379 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
SP3-205ENST00000465379 MT1GP13640 62 aa1.47□□□□□ -2.17
SP3-205ENST00000465379 KRTAP5-4Q6L8H1 288 aa1.47□□□□□ -2.17
SP3-205ENST00000465379 PLECQ15149 4684 aaKnown RBP1.46□□□□□ -2.18
SP3-205ENST00000465379 HSPG2P98160 4391 aa1.46□□□□□ -2.18
SP3-205ENST00000465379 BIRC6Q9NR09 4857 aa1.45□□□□□ -2.18
SP3-205ENST00000465379 MT1FP04733 61 aa1.45□□□□□ -2.18
SP3-205ENST00000465379 FBN1P35555 2871 aaKnown RBP1.45□□□□□ -2.18
SP3-205ENST00000465379 SETD2Q9BYW2 2564 aaPredicted RBP1.45□□□□□ -2.18
SP3-205ENST00000465379 MT2AP02795 61 aa1.45□□□□□ -2.18
SP3-205ENST00000465379 GOLGB1Q14789 3259 aaKnown RBP1.44□□□□□ -2.18
SP3-205ENST00000465379 KRTAP2-2Q9BYT5 123 aa1.44□□□□□ -2.18
SP3-205ENST00000465379 LCE3AQ5TA76 89 aa1.44□□□□□ -2.18
SP3-205ENST00000465379 POLQO75417 2590 aa1.44□□□□□ -2.18
SP3-205ENST00000465379 DNAH6Q9C0G6 4158 aa1.44□□□□□ -2.18
SP3-205ENST00000465379 HECTD1Q9ULT8 2610 aa1.43□□□□□ -2.18
SP3-205ENST00000465379 ANKRD11Q6UB99 2663 aaPredicted RBP1.43□□□□□ -2.18
SP3-205ENST00000465379 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
SP3-205ENST00000465379 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
SP3-205ENST00000465379 PCLOQ9Y6V0 5065 aa1.42□□□□□ -2.18
SP3-205ENST00000465379 STAB1Q9NY15 2570 aa1.41□□□□□ -2.18
SP3-205ENST00000465379 KMT2CQ8NEZ4 4911 aaKnown RBP1.41□□□□□ -2.18
SP3-205ENST00000465379 DYNC2H1Q8NCM8 4307 aaKnown RBP1.41□□□□□ -2.18
SP3-205ENST00000465379 DNAH2Q9P225 4427 aa1.4□□□□□ -2.18
SP3-205ENST00000465379 MKI67P46013 3256 aaKnown RBP1.4□□□□□ -2.19
SP3-205ENST00000465379 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
SP3-205ENST00000465379 RYR2Q92736 4967 aa1.39□□□□□ -2.19
SP3-205ENST00000465379 USP9YO00507 2555 aaPredicted RBP1.39□□□□□ -2.19
SP3-205ENST00000465379 HTTP42858 3142 aa1.39□□□□□ -2.19
SP3-205ENST00000465379 TRRAPQ9Y4A5 3859 aa1.38□□□□□ -2.19
SP3-205ENST00000465379 FLG2Q5D862 2391 aaPredicted RBP1.38□□□□□ -2.19
SP3-205ENST00000465379 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
SP3-205ENST00000465379 LCE3CQ5T5A8 94 aa1.37□□□□□ -2.19
SP3-205ENST00000465379 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
SP3-205ENST00000465379 TNXBP22105 4242 aa1.37□□□□□ -2.19
SP3-205ENST00000465379 TRANK1O15050 2925 aa1.37□□□□□ -2.19
SP3-205ENST00000465379 KRTAP5-11Q6L8G4 156 aa1.36□□□□□ -2.19
SP3-205ENST00000465379 DNAH3Q8TD57 4116 aa1.36□□□□□ -2.19
SP3-205ENST00000465379 LRP1Q07954 4544 aaKnown RBP1.36□□□□□ -2.19
SP3-205ENST00000465379 KRTAP19-6Q3LI70 58 aa1.36□□□□□ -2.19
SP3-205ENST00000465379 UBR5O95071 2799 aaPredicted RBP1.36□□□□□ -2.19
SP3-205ENST00000465379 ANK3Q12955 4377 aaKnown RBP1.36□□□□□ -2.19
SP3-205ENST00000465379 DNHD1Q96M86 4753 aa1.35□□□□□ -2.19
SP3-205ENST00000465379 FLNAP21333 2647 aaKnown RBP1.35□□□□□ -2.19
SP3-205ENST00000465379 DYNC1H1Q14204 4646 aaKnown RBP1.35□□□□□ -2.19
SP3-205ENST00000465379 KRTAP5-5Q701N2 237 aaPredicted RBP1.35□□□□□ -2.19
SP3-205ENST00000465379 SACSQ9NZJ4 4579 aa1.34□□□□□ -2.2
SP3-205ENST00000465379 UNC79Q9P2D8 2635 aa1.34□□□□□ -2.2
SP3-205ENST00000465379 FLNBO75369 2602 aaKnown RBP1.33□□□□□ -2.2
SP3-205ENST00000465379 USP24Q9UPU5 2620 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms