RNA–Protein interactions for RNA: ENST00000465366.1

PCNP-203, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 771 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-203ENST00000465366 APC2O95996 2303 aa0.77□□□□□ -2.29
PCNP-203ENST00000465366 SPRR2DP22532 72 aa0.77□□□□□ -2.29
PCNP-203ENST00000465366 NOP10Q9NPE3 64 aaKnown RBP0.77□□□□□ -2.29
PCNP-203ENST00000465366 PKD1P98161 4303 aa0.76□□□□□ -2.29
PCNP-203ENST00000465366 VPS13BQ7Z7G8 4022 aa0.76□□□□□ -2.29
PCNP-203ENST00000465366 HRNRQ86YZ3 2850 aaPredicted RBP0.75□□□□□ -2.29
PCNP-203ENST00000465366 SACSQ9NZJ4 4579 aa0.75□□□□□ -2.29
PCNP-203ENST00000465366 MMP24-AS1A0A0U1RRL7 71 aa0.73□□□□□ -2.29
PCNP-203ENST00000465366 CACNA1AO00555 2505 aa0.73□□□□□ -2.29
PCNP-203ENST00000465366 NF1P21359 2839 aa0.73□□□□□ -2.29
PCNP-203ENST00000465366 PDZD2O15018 2839 aa0.72□□□□□ -2.29
PCNP-203ENST00000465366 ZZEF1O43149 2961 aa0.72□□□□□ -2.29
PCNP-203ENST00000465366 IGSF10Q6WRI0 2623 aa0.71□□□□□ -2.3
PCNP-203ENST00000465366 DEFB131AP59861 70 aa0.71□□□□□ -2.3
PCNP-203ENST00000465366 SRRM2Q9UQ35 2752 aaKnown RBP0.71□□□□□ -2.3
PCNP-203ENST00000465366 DNAH11Q96DT5 4516 aa0.69□□□□□ -2.3
PCNP-203ENST00000465366 FAT4Q6V0I7 4981 aa0.68□□□□□ -2.3
PCNP-203ENST00000465366 C9orf92A6NGG3 77 aa0.68□□□□□ -2.3
PCNP-203ENST00000465366 COL7A1Q02388 2944 aa0.68□□□□□ -2.3
PCNP-203ENST00000465366 DCHS2Q6V1P9 2916 aa0.68□□□□□ -2.3
PCNP-203ENST00000465366 NSD1Q96L73 2696 aaPredicted RBP0.68□□□□□ -2.3
PCNP-203ENST00000465366 SPRR2BP35325 72 aa0.67□□□□□ -2.3
PCNP-203ENST00000465366 HSPG2P98160 4391 aa0.66□□□□□ -2.3
PCNP-203ENST00000465366 HECTD4Q9Y4D8 3996 aa0.66□□□□□ -2.3
PCNP-203ENST00000465366 LRP1BQ9NZR2 4599 aa0.66□□□□□ -2.3
PCNP-203ENST00000465366 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.31
PCNP-203ENST00000465366 FLNBO75369 2602 aaKnown RBP0.65□□□□□ -2.31
PCNP-203ENST00000465366 DNAH3Q8TD57 4116 aa0.65□□□□□ -2.31
PCNP-203ENST00000465366 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
PCNP-203ENST00000465366 M0QY20 66 aa0.64□□□□□ -2.31
PCNP-203ENST00000465366 FLNCQ14315 2725 aa0.62□□□□□ -2.31
PCNP-203ENST00000465366 H3BNG1 76 aa0.62□□□□□ -2.31
PCNP-203ENST00000465366 GCN1Q92616 2671 aaKnown RBP0.62□□□□□ -2.31
PCNP-203ENST00000465366 CUBNO60494 3623 aa0.62□□□□□ -2.31
PCNP-203ENST00000465366 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
PCNP-203ENST00000465366 DNAH2Q9P225 4427 aa0.61□□□□□ -2.31
PCNP-203ENST00000465366 ANK3Q12955 4377 aaKnown RBP0.61□□□□□ -2.31
PCNP-203ENST00000465366 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
PCNP-203ENST00000465366 DMXL1Q9Y485 3027 aa0.6□□□□□ -2.31
PCNP-203ENST00000465366 A8MTW9 85 aa0.6□□□□□ -2.31
PCNP-203ENST00000465366 HMCN2Q8NDA2 5059 aa0.6□□□□□ -2.31
PCNP-203ENST00000465366 STAB1Q9NY15 2570 aa0.59□□□□□ -2.31
PCNP-203ENST00000465366 TACC2O95359 2948 aa0.59□□□□□ -2.31
PCNP-203ENST00000465366 PKHD1L1Q86WI1 4243 aa0.59□□□□□ -2.31
PCNP-203ENST00000465366 SPTBN4Q9H254 2564 aa0.59□□□□□ -2.32
PCNP-203ENST00000465366 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.32
PCNP-203ENST00000465366 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
PCNP-203ENST00000465366 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
PCNP-203ENST00000465366 DUOX1Q9NRD9 1551 aa0.57□□□□□ -2.32
PCNP-203ENST00000465366 MAST4O15021 2626 aa0.56□□□□□ -2.32
PCNP-203ENST00000465366 COL6A3P12111 3177 aa0.56□□□□□ -2.32
PCNP-203ENST00000465366 PKHD1P08F94 4074 aa0.56□□□□□ -2.32
PCNP-203ENST00000465366 APOBP04114 4563 aaKnown RBP0.55□□□□□ -2.32
PCNP-203ENST00000465366 ACACAQ13085 2346 aa0.55□□□□□ -2.32
PCNP-203ENST00000465366 SNRPGP62308 76 aaKnown RBP0.55□□□□□ -2.32
PCNP-203ENST00000465366 SONP18583 2426 aaKnown RBP0.55□□□□□ -2.32
PCNP-203ENST00000465366 MTORP42345 2549 aa0.55□□□□□ -2.32
PCNP-203ENST00000465366 M0QZ58 72 aa0.54□□□□□ -2.32
PCNP-203ENST00000465366 DYNC2H1Q8NCM8 4307 aaKnown RBP0.54□□□□□ -2.32
PCNP-203ENST00000465366 MROH2BQ7Z745 1585 aa0.53□□□□□ -2.32
PCNP-203ENST00000465366 DMBT1Q9UGM3 2413 aaPredicted RBP0.53□□□□□ -2.32
PCNP-203ENST00000465366 SPENQ96T58 3664 aaKnown RBP0.53□□□□□ -2.33
PCNP-203ENST00000465366 FAT3Q8TDW7 4589 aa0.53□□□□□ -2.33
PCNP-203ENST00000465366 AKAP9Q99996 3911 aa0.52□□□□□ -2.33
PCNP-203ENST00000465366 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
PCNP-203ENST00000465366 LRRK2Q5S007 2527 aa0.5□□□□□ -2.33
PCNP-203ENST00000465366 VPS13DQ5THJ4 4388 aa0.5□□□□□ -2.33
PCNP-203ENST00000465366 TNP1P09430 55 aa0.5□□□□□ -2.33
PCNP-203ENST00000465366 SPRR2AP35326 72 aa0.5□□□□□ -2.33
PCNP-203ENST00000465366 FLNAP21333 2647 aaKnown RBP0.5□□□□□ -2.33
PCNP-203ENST00000465366 SPG11Q96JI7 2443 aa0.49□□□□□ -2.33
PCNP-203ENST00000465366 RANBP2P49792 3224 aaKnown RBP0.49□□□□□ -2.33
PCNP-203ENST00000465366 TENM2Q9NT68 2774 aa0.49□□□□□ -2.33
PCNP-203ENST00000465366 COL6A5A8TX70 2615 aa0.49□□□□□ -2.33
PCNP-203ENST00000465366 CLPSL2Q6UWE3 100 aa0.49□□□□□ -2.33
PCNP-203ENST00000465366 RIF1Q5UIP0 2472 aaKnown RBP0.49□□□□□ -2.33
PCNP-203ENST00000465366 KALRNO60229 2985 aa0.49□□□□□ -2.33
PCNP-203ENST00000465366 ANKHD1Q8IWZ3 2542 aaKnown RBP0.48□□□□□ -2.33
PCNP-203ENST00000465366 FAM186AA6NE01 2351 aa0.48□□□□□ -2.33
PCNP-203ENST00000465366 COL12A1Q99715 3063 aa0.48□□□□□ -2.33
PCNP-203ENST00000465366 ANKRD11Q6UB99 2663 aaPredicted RBP0.48□□□□□ -2.33
PCNP-203ENST00000465366 SVEP1Q4LDE5 3571 aa0.47□□□□□ -2.33
PCNP-203ENST00000465366 HTTP42858 3142 aa0.47□□□□□ -2.33
PCNP-203ENST00000465366 LRP2P98164 4655 aa0.47□□□□□ -2.33
PCNP-203ENST00000465366 DNAH6Q9C0G6 4158 aa0.47□□□□□ -2.33
PCNP-203ENST00000465366 NBEAL2Q6ZNJ1 2754 aa0.46□□□□□ -2.34
PCNP-203ENST00000465366 POLR2KP53803 58 aaKnown RBP0.46□□□□□ -2.34
PCNP-203ENST00000465366 DEFB110Q30KQ9 67 aa0.45□□□□□ -2.34
PCNP-203ENST00000465366 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
PCNP-203ENST00000465366 ZANQ9Y493 2812 aa0.45□□□□□ -2.34
PCNP-203ENST00000465366 GCC2Q8IWJ2 1684 aa0.44□□□□□ -2.34
PCNP-203ENST00000465366 UTP20O75691 2785 aaKnown RBP0.44□□□□□ -2.34
PCNP-203ENST00000465366 EPG5Q9HCE0 2579 aa0.44□□□□□ -2.34
PCNP-203ENST00000465366 MT1AP04731 61 aa0.44□□□□□ -2.34
PCNP-203ENST00000465366 MAP1AP78559 2803 aaPredicted RBP0.43□□□□□ -2.34
PCNP-203ENST00000465366 NBEAQ8NFP9 2946 aa0.43□□□□□ -2.34
PCNP-203ENST00000465366 FRYQ5TBA9 3013 aa0.42□□□□□ -2.34
PCNP-203ENST00000465366 SPTBN5Q9NRC6 3674 aaKnown RBP0.42□□□□□ -2.34
PCNP-203ENST00000465366 DNAH8Q96JB1 4490 aa0.42□□□□□ -2.34
PCNP-203ENST00000465366 DNAH7Q8WXX0 4024 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms