RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143		K7ERU9	68 aa		4.46	□□□□□ -1.7
ITSN1-223	ENST00000465143	SSBP3-AS1	Q7Z2R9	100 aa		4.45	□□□□□ -1.7
ITSN1-223	ENST00000465143	HRCT1	Q6UXD1	115 aa		4.44	□□□□□ -1.7
ITSN1-223	ENST00000465143	FAM240A	A0A1B0GVK7	77 aa		4.43	□□□□□ -1.7
ITSN1-223	ENST00000465143	KRTAP15-1	Q3LI76	137 aa		4.43	□□□□□ -1.7
ITSN1-223	ENST00000465143	SPAG11A	Q6PDA7	123 aa		4.43	□□□□□ -1.7
ITSN1-223	ENST00000465143	ACYP1	P07311	99 aa		4.42	□□□□□ -1.7
ITSN1-223	ENST00000465143		Q6Q795	121 aa		4.42	□□□□□ -1.7
ITSN1-223	ENST00000465143	LINC00846	Q9NV44	126 aa		4.42	□□□□□ -1.7
ITSN1-223	ENST00000465143	TRBV7-7	A0A0K0K1E9	115 aa		4.41	□□□□□ -1.7
ITSN1-223	ENST00000465143	RETNLB	Q9BQ08	111 aa		4.41	□□□□□ -1.7
ITSN1-223	ENST00000465143	LRP2	P98164	4655 aa		4.4	□□□□□ -1.7
ITSN1-223	ENST00000465143		A0A087WSZ3	146 aa		4.4	□□□□□ -1.71
ITSN1-223	ENST00000465143		A0A1B0GW54	56 aa		4.4	□□□□□ -1.71
ITSN1-223	ENST00000465143	CD164	Q04900	197 aa		4.4	□□□□□ -1.71
ITSN1-223	ENST00000465143	SPINK1	P00995	79 aa		4.38	□□□□□ -1.71
ITSN1-223	ENST00000465143	NREP	Q16612	68 aa		4.38	□□□□□ -1.71
ITSN1-223	ENST00000465143		Q6ZVQ6	151 aa		4.38	□□□□□ -1.71
ITSN1-223	ENST00000465143	UBL5	Q9BZL1	73 aa		4.38	□□□□□ -1.71
ITSN1-223	ENST00000465143	IGLV7-46	A0A075B6I9	117 aa		4.37	□□□□□ -1.71
ITSN1-223	ENST00000465143	LINC00643	Q86TS7	51 aa		4.35	□□□□□ -1.71
ITSN1-223	ENST00000465143	SS18L2	Q9UHA2	77 aa		4.35	□□□□□ -1.71
ITSN1-223	ENST00000465143	DEFB116	Q30KQ4	102 aa		4.34	□□□□□ -1.71
ITSN1-223	ENST00000465143	FP248	Q71RG6	208 aa	Predicted RBP	4.34	□□□□□ -1.71
ITSN1-223	ENST00000465143	RNF213	Q63HN8	5207 aa		4.33	□□□□□ -1.72
ITSN1-223	ENST00000465143	IGKV3D-7	A0A0C4DH55	119 aa		4.33	□□□□□ -1.72
ITSN1-223	ENST00000465143	BPY2	O14599	106 aa		4.33	□□□□□ -1.72
ITSN1-223	ENST00000465143	RPS29	P62273	56 aa	Known RBP	4.33	□□□□□ -1.72
ITSN1-223	ENST00000465143		Q5XG85	94 aa		4.33	□□□□□ -1.72
ITSN1-223	ENST00000465143		Q96NJ1	140 aa		4.33	□□□□□ -1.72
ITSN1-223	ENST00000465143	LIMD2	Q9BT23	127 aa		4.33	□□□□□ -1.72
ITSN1-223	ENST00000465143	LINC00472	Q9H8W2	130 aa		4.33	□□□□□ -1.72
ITSN1-223	ENST00000465143	LPA	P08519	4548 aa		4.32	□□□□□ -1.72
ITSN1-223	ENST00000465143	MT-ATP8	P03928	68 aa		4.32	□□□□□ -1.72
ITSN1-223	ENST00000465143	ASB16-AS1	Q495Z4	193 aa		4.32	□□□□□ -1.72
ITSN1-223	ENST00000465143	ATP5EP2	Q5VTU8	51 aa		4.32	□□□□□ -1.72
ITSN1-223	ENST00000465143	SIGMAR1	Q99720	223 aa		4.32	□□□□□ -1.72
ITSN1-223	ENST00000465143	IGKV4-1	P06312	121 aa		4.31	□□□□□ -1.72
ITSN1-223	ENST00000465143	CXCL6	P80162	114 aa		4.31	□□□□□ -1.72
ITSN1-223	ENST00000465143	TPRXL	Q17RH7	258 aa		4.31	□□□□□ -1.72
ITSN1-223	ENST00000465143	C1orf195	Q5TG92	126 aa		4.31	□□□□□ -1.72
ITSN1-223	ENST00000465143		J3KT08	172 aa		4.3	□□□□□ -1.72
ITSN1-223	ENST00000465143	DSCR10	P59022	87 aa		4.29	□□□□□ -1.72
ITSN1-223	ENST00000465143		Q8N9L7	120 aa		4.29	□□□□□ -1.72
ITSN1-223	ENST00000465143	HIST1H4A	P62805	103 aa	Known RBP	4.28	□□□□□ -1.72
ITSN1-223	ENST00000465143		A8MWP4	228 aa		4.27	□□□□□ -1.73
ITSN1-223	ENST00000465143		K7EQZ3	153 aa		4.27	□□□□□ -1.73
ITSN1-223	ENST00000465143	KRTAP13-3	Q3SY46	172 aa		4.27	□□□□□ -1.73
ITSN1-223	ENST00000465143	NDUFB1	O75438	58 aa		4.26	□□□□□ -1.73
ITSN1-223	ENST00000465143		A0A087WVE0	104 aa		4.25	□□□□□ -1.73
ITSN1-223	ENST00000465143		A0A0U1RQV1	116 aa		4.25	□□□□□ -1.73
ITSN1-223	ENST00000465143		A0A1B0GVX0	72 aa		4.25	□□□□□ -1.73
ITSN1-223	ENST00000465143	PRR15	Q8IV56	129 aa		4.25	□□□□□ -1.73
ITSN1-223	ENST00000465143	IMUP	Q9GZP8	106 aa		4.25	□□□□□ -1.73
ITSN1-223	ENST00000465143	IGHV6-1	A0A0B4J1U7	121 aa		4.24	□□□□□ -1.73
ITSN1-223	ENST00000465143	SEC61B	P60468	96 aa	Known RBP	4.22	□□□□□ -1.73
ITSN1-223	ENST00000465143	NOTCH2NL	Q7Z3S9	236 aa		4.22	□□□□□ -1.73
ITSN1-223	ENST00000465143	C8orf17	Q9NRJ1	99 aa		4.22	□□□□□ -1.73
ITSN1-223	ENST00000465143	MMP24-AS1	A0A0U1RRL7	71 aa		4.21	□□□□□ -1.74
ITSN1-223	ENST00000465143	C9orf92	A6NGG3	77 aa		4.21	□□□□□ -1.74
ITSN1-223	ENST00000465143	HCG22	E2RYF7	251 aa		4.21	□□□□□ -1.74
ITSN1-223	ENST00000465143	MUC2	Q02817	5179 aa		4.21	□□□□□ -1.74
ITSN1-223	ENST00000465143	C8orf87	E5RJ46	101 aa		4.2	□□□□□ -1.74
ITSN1-223	ENST00000465143	LINC00313	P59037	77 aa		4.2	□□□□□ -1.74
ITSN1-223	ENST00000465143	CASC2	Q6XLA1	102 aa		4.2	□□□□□ -1.74
ITSN1-223	ENST00000465143	WFDC13	Q8IUB5	93 aa		4.2	□□□□□ -1.74
ITSN1-223	ENST00000465143	FAM236A	A0A1B0GUQ0	79 aa		4.19	□□□□□ -1.74
ITSN1-223	ENST00000465143	FAM236B	A0A1B0GV22	79 aa		4.19	□□□□□ -1.74
ITSN1-223	ENST00000465143	hDV103S1	A0JD37	113 aa		4.19	□□□□□ -1.74
ITSN1-223	ENST00000465143	MUC17	Q685J3	4493 aa		4.19	□□□□□ -1.74
ITSN1-223	ENST00000465143	KRTAP23-1	A1A580	65 aa		4.17	□□□□□ -1.74
ITSN1-223	ENST00000465143	KRTAP16-1	A8MUX0	517 aa		4.16	□□□□□ -1.74
ITSN1-223	ENST00000465143	SCGB1A1	P11684	91 aa		4.16	□□□□□ -1.74
ITSN1-223	ENST00000465143	TMEM254	Q8TBM7	123 aa		4.16	□□□□□ -1.74
ITSN1-223	ENST00000465143	MRPL34	Q9BQ48	92 aa	Known RBP	4.15	□□□□□ -1.75
ITSN1-223	ENST00000465143	ATOX1	O00244	68 aa		4.14	□□□□□ -1.75
ITSN1-223	ENST00000465143	NDUFS5	O43920	106 aa		4.13	□□□□□ -1.75
ITSN1-223	ENST00000465143	PCOTH	Q58A44	107 aa		4.13	□□□□□ -1.75
ITSN1-223	ENST00000465143		Q8N9P0	234 aa	Predicted RBP	4.12	□□□□□ -1.75
ITSN1-223	ENST00000465143	FAT4	Q6V0I7	4981 aa		4.12	□□□□□ -1.75
ITSN1-223	ENST00000465143	TRAV7	A0A075B6U4	112 aa		4.1	□□□□□ -1.75
ITSN1-223	ENST00000465143	RPL37	P61927	97 aa	Known RBP	4.1	□□□□□ -1.75
ITSN1-223	ENST00000465143	SMIM20	Q8N5G0	67 aa		4.1	□□□□□ -1.75
ITSN1-223	ENST00000465143	C20orf166-AS1	Q96NR2	134 aa		4.1	□□□□□ -1.75
ITSN1-223	ENST00000465143	ANAPC13	Q9BS18	74 aa		4.1	□□□□□ -1.75
ITSN1-223	ENST00000465143	KRTAP4-1	Q9BYQ7	146 aa		4.1	□□□□□ -1.75
ITSN1-223	ENST00000465143	OCR1	Q9BZK8	76 aa		4.1	□□□□□ -1.75
ITSN1-223	ENST00000465143		A8MUU9	505 aa		4.09	□□□□□ -1.75
ITSN1-223	ENST00000465143	UQCRQ	O14949	82 aa		4.09	□□□□□ -1.75
ITSN1-223	ENST00000465143	TP53AIP1	Q9HCN2	124 aa		4.09	□□□□□ -1.75
ITSN1-223	ENST00000465143	ATP11AUN	Q6ZP68	121 aa		4.08	□□□□□ -1.76
ITSN1-223	ENST00000465143		Q75L30	129 aa		4.08	□□□□□ -1.76
ITSN1-223	ENST00000465143	SERP2	Q8N6R1	65 aa		4.08	□□□□□ -1.76
ITSN1-223	ENST00000465143		Q5W150	140 aa		4.06	□□□□□ -1.76
ITSN1-223	ENST00000465143	TRAV22	A0A0B4J277	110 aa		4.05	□□□□□ -1.76
ITSN1-223	ENST00000465143		H0Y9P7	68 aa		4.05	□□□□□ -1.76
ITSN1-223	ENST00000465143	COX7C	P15954	63 aa		4.05	□□□□□ -1.76
ITSN1-223	ENST00000465143	C5orf47	Q569G3	176 aa		4.05	□□□□□ -1.76
ITSN1-223	ENST00000465143	ZCCHC13	Q8WW36	166 aa	Known RBP	4.05	□□□□□ -1.76
ITSN1-223	ENST00000465143	PCP4	P48539	62 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms