RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 TRIAP1O43715 76 aa7.15□□□□□ -1.26
MCF2L-220ENST00000464800 COX6CP09669 75 aa7.14□□□□□ -1.27
MCF2L-220ENST00000464800 NOTCH2NLQ7Z3S9 236 aa7.14□□□□□ -1.27
MCF2L-220ENST00000464800 MTURNQ8N3F0 131 aa7.13□□□□□ -1.27
MCF2L-220ENST00000464800 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
MCF2L-220ENST00000464800 TRBV7-4A0A0J9YYF1 115 aa7.12□□□□□ -1.27
MCF2L-220ENST00000464800 DEFB116Q30KQ4 102 aa7.12□□□□□ -1.27
MCF2L-220ENST00000464800 COL5A1-AS1Q5SY13 56 aa7.12□□□□□ -1.27
MCF2L-220ENST00000464800 A0A1B0GV72 72 aa7.11□□□□□ -1.27
MCF2L-220ENST00000464800 SCGB1C2P0DMR2 95 aa7.11□□□□□ -1.27
MCF2L-220ENST00000464800 NAA38Q9BRA0 125 aaKnown RBP7.11□□□□□ -1.27
MCF2L-220ENST00000464800 TAX1BP3O14907 124 aa7.1□□□□□ -1.27
MCF2L-220ENST00000464800 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
MCF2L-220ENST00000464800 LYRM7Q5U5X0 104 aa7.1□□□□□ -1.27
MCF2L-220ENST00000464800 LINC00472Q9H8W2 130 aa7.1□□□□□ -1.27
MCF2L-220ENST00000464800 C9orf118A6NHY6 69 aa7.09□□□□□ -1.27
MCF2L-220ENST00000464800 IGHV6-1A0A0B4J1U7 121 aa7.08□□□□□ -1.28
MCF2L-220ENST00000464800 ORMDL1Q9P0S3 153 aa7.08□□□□□ -1.28
MCF2L-220ENST00000464800 DNAL4O96015 105 aa7.07□□□□□ -1.28
MCF2L-220ENST00000464800 H3BQ85 93 aa7.06□□□□□ -1.28
MCF2L-220ENST00000464800 CCKP06307 115 aa7.06□□□□□ -1.28
MCF2L-220ENST00000464800 TMEM256-PLSCR3K7ERE1 68 aa7.05□□□□□ -1.28
MCF2L-220ENST00000464800 TRACP01848 142 aa7.05□□□□□ -1.28
MCF2L-220ENST00000464800 A0A1W2PPM0 123 aa7.04□□□□□ -1.28
MCF2L-220ENST00000464800 A8MWP4 228 aa7.04□□□□□ -1.28
MCF2L-220ENST00000464800 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
MCF2L-220ENST00000464800 A0A1B0GVX0 72 aa7□□□□□ -1.29
MCF2L-220ENST00000464800 C8orf87E5RJ46 101 aa7□□□□□ -1.29
MCF2L-220ENST00000464800 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
MCF2L-220ENST00000464800 SPINK7P58062 85 aa6.99□□□□□ -1.29
MCF2L-220ENST00000464800 UBE2V1Q13404 147 aa6.99□□□□□ -1.29
MCF2L-220ENST00000464800 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
MCF2L-220ENST00000464800 VPS25Q9BRG1 176 aa6.98□□□□□ -1.29
MCF2L-220ENST00000464800 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
MCF2L-220ENST00000464800 C9JAW5 83 aa6.94□□□□□ -1.3
MCF2L-220ENST00000464800 K7EP34 96 aa6.94□□□□□ -1.3
MCF2L-220ENST00000464800 RBM3P98179 157 aaKnown RBP6.94□□□□□ -1.3
MCF2L-220ENST00000464800 WFDC13Q8IUB5 93 aa6.94□□□□□ -1.3
MCF2L-220ENST00000464800 GTF2H5Q6ZYL4 71 aa6.93□□□□□ -1.3
MCF2L-220ENST00000464800 DSCR8Q96T75 97 aa6.93□□□□□ -1.3
MCF2L-220ENST00000464800 J3KT08 172 aa6.92□□□□□ -1.3
MCF2L-220ENST00000464800 BAALC-AS2P0C853 105 aa6.92□□□□□ -1.3
MCF2L-220ENST00000464800 H3BT86 120 aa6.89□□□□□ -1.31
MCF2L-220ENST00000464800 C21orf62-AS1Q17RA5 79 aa6.89□□□□□ -1.31
MCF2L-220ENST00000464800 Q6ZQT0 140 aa6.89□□□□□ -1.31
MCF2L-220ENST00000464800 NDUFB1O75438 58 aa6.88□□□□□ -1.31
MCF2L-220ENST00000464800 A0A1B0GV90 55 aa6.86□□□□□ -1.31
MCF2L-220ENST00000464800 JMJD7-PLA2G4BH0Y9G9 81 aa6.84□□□□□ -1.31
MCF2L-220ENST00000464800 C8orf17Q9NRJ1 99 aa6.84□□□□□ -1.31
MCF2L-220ENST00000464800 NEBP20929 6669 aa6.83□□□□□ -1.32
MCF2L-220ENST00000464800 PRO0461Q9UI25 63 aa6.82□□□□□ -1.32
MCF2L-220ENST00000464800 IGKV3D-7A0A0C4DH55 119 aa6.81□□□□□ -1.32
MCF2L-220ENST00000464800 F8W1H4 67 aa6.81□□□□□ -1.32
MCF2L-220ENST00000464800 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
MCF2L-220ENST00000464800 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
MCF2L-220ENST00000464800 Q6ZVQ6 151 aa6.79□□□□□ -1.32
MCF2L-220ENST00000464800 KRTAP20-1Q3LI63 56 aa6.78□□□□□ -1.32
MCF2L-220ENST00000464800 C14orf132Q9NPU4 83 aa6.78□□□□□ -1.32
MCF2L-220ENST00000464800 A0A1B0GW54 56 aa6.77□□□□□ -1.33
MCF2L-220ENST00000464800 PDE6GP18545 87 aa6.77□□□□□ -1.33
MCF2L-220ENST00000464800 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
MCF2L-220ENST00000464800 A6NN06 94 aa6.75□□□□□ -1.33
MCF2L-220ENST00000464800 PRR15Q8IV56 129 aa6.75□□□□□ -1.33
MCF2L-220ENST00000464800 ETDBQ3ZM63 59 aa6.73□□□□□ -1.33
MCF2L-220ENST00000464800 TMEM254Q8TBM7 123 aa6.71□□□□□ -1.34
MCF2L-220ENST00000464800 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
MCF2L-220ENST00000464800 MMP24-AS1A0A0U1RRL7 71 aa6.7□□□□□ -1.34
MCF2L-220ENST00000464800 NREPQ16612 68 aa6.7□□□□□ -1.34
MCF2L-220ENST00000464800 NDUFS5O43920 106 aa6.67□□□□□ -1.34
MCF2L-220ENST00000464800 hDV103S1A0JD37 113 aa6.66□□□□□ -1.34
MCF2L-220ENST00000464800 MUC12Q9UKN1 5478 aa6.65□□□□□ -1.35
MCF2L-220ENST00000464800 IGKV2D-30A0A075B6S6 120 aa6.64□□□□□ -1.35
MCF2L-220ENST00000464800 K7EQZ3 153 aa6.64□□□□□ -1.35
MCF2L-220ENST00000464800 IGKV2-30P06310 120 aa6.64□□□□□ -1.35
MCF2L-220ENST00000464800 MT1BP07438 61 aa6.64□□□□□ -1.35
MCF2L-220ENST00000464800 Q5VV11 94 aa6.64□□□□□ -1.35
MCF2L-220ENST00000464800 FAM236AA0A1B0GUQ0 79 aa6.63□□□□□ -1.35
MCF2L-220ENST00000464800 FAM236BA0A1B0GV22 79 aa6.63□□□□□ -1.35
MCF2L-220ENST00000464800 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
MCF2L-220ENST00000464800 Q5W150 140 aa6.61□□□□□ -1.35
MCF2L-220ENST00000464800 C7orf65Q6ZTY9 151 aa6.6□□□□□ -1.35
MCF2L-220ENST00000464800 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
MCF2L-220ENST00000464800 ACYP1P07311 99 aa6.57□□□□□ -1.36
MCF2L-220ENST00000464800 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
MCF2L-220ENST00000464800 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
MCF2L-220ENST00000464800 FAM240AA0A1B0GVK7 77 aa6.56□□□□□ -1.36
MCF2L-220ENST00000464800 J3QR89 54 aa6.56□□□□□ -1.36
MCF2L-220ENST00000464800 C4orf26Q17RF5 130 aa6.56□□□□□ -1.36
MCF2L-220ENST00000464800 C5orf47Q569G3 176 aa6.56□□□□□ -1.36
MCF2L-220ENST00000464800 BPY2O14599 106 aa6.55□□□□□ -1.36
MCF2L-220ENST00000464800 SPRR2GQ9BYE4 73 aa6.55□□□□□ -1.36
MCF2L-220ENST00000464800 CASC2Q6XLA1 102 aa6.52□□□□□ -1.37
MCF2L-220ENST00000464800 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
MCF2L-220ENST00000464800 Q8N9L7 120 aa6.51□□□□□ -1.37
MCF2L-220ENST00000464800 K7ERU9 68 aa6.48□□□□□ -1.37
MCF2L-220ENST00000464800 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
MCF2L-220ENST00000464800 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
MCF2L-220ENST00000464800 CXCL6P80162 114 aa6.47□□□□□ -1.37
MCF2L-220ENST00000464800 S4R3F8 94 aa6.47□□□□□ -1.37
MCF2L-220ENST00000464800 KMT2DO14686 5537 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms