RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 C5orf47Q569G3 176 aa8.54□□□□□ -1.04
COL5A1-205ENST00000464187 A0A087X002 238 aa8.53□□□□□ -1.04
COL5A1-205ENST00000464187 SERP1Q9Y6X1 66 aa8.53□□□□□ -1.04
COL5A1-205ENST00000464187 Q5VSD8 79 aa8.52□□□□□ -1.04
COL5A1-205ENST00000464187 NDUFB1O75438 58 aa8.51□□□□□ -1.05
COL5A1-205ENST00000464187 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
COL5A1-205ENST00000464187 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
COL5A1-205ENST00000464187 KRTAP17-1Q9BYP8 105 aa8.48□□□□□ -1.05
COL5A1-205ENST00000464187 hDV103S1A0JD37 113 aa8.47□□□□□ -1.05
COL5A1-205ENST00000464187 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
COL5A1-205ENST00000464187 SSBP3-AS1Q7Z2R9 100 aa8.46□□□□□ -1.06
COL5A1-205ENST00000464187 A0A1B0GVX0 72 aa8.45□□□□□ -1.06
COL5A1-205ENST00000464187 C8orf17Q9NRJ1 99 aa8.45□□□□□ -1.06
COL5A1-205ENST00000464187 MP68P56378 58 aa8.45□□□□□ -1.06
COL5A1-205ENST00000464187 Q8N1X5 172 aa8.45□□□□□ -1.06
COL5A1-205ENST00000464187 H0Y9P7 68 aa8.44□□□□□ -1.06
COL5A1-205ENST00000464187 CD164Q04900 197 aa8.44□□□□□ -1.06
COL5A1-205ENST00000464187 IGHV6-1A0A0B4J1U7 121 aa8.43□□□□□ -1.06
COL5A1-205ENST00000464187 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
COL5A1-205ENST00000464187 LINC00208Q96KT6 92 aa8.42□□□□□ -1.06
COL5A1-205ENST00000464187 TYMSOSQ8TAI1 123 aa8.41□□□□□ -1.06
COL5A1-205ENST00000464187 TRAV22A0A0B4J277 110 aa8.4□□□□□ -1.06
COL5A1-205ENST00000464187 Q5XG85 94 aa8.4□□□□□ -1.06
COL5A1-205ENST00000464187 H3BPC8 53 aa8.4□□□□□ -1.07
COL5A1-205ENST00000464187 PKHD1L1Q86WI1 4243 aa8.38□□□□□ -1.07
COL5A1-205ENST00000464187 NOTCH2NLQ7Z3S9 236 aa8.38□□□□□ -1.07
COL5A1-205ENST00000464187 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
COL5A1-205ENST00000464187 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
COL5A1-205ENST00000464187 C1orf64Q8NEQ6 169 aa8.35□□□□□ -1.07
COL5A1-205ENST00000464187 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
COL5A1-205ENST00000464187 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
COL5A1-205ENST00000464187 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
COL5A1-205ENST00000464187 C4orf26Q17RF5 130 aa8.33□□□□□ -1.08
COL5A1-205ENST00000464187 CYP4F30PQ9H0H9 118 aa8.33□□□□□ -1.08
COL5A1-205ENST00000464187 NDUFS5O43920 106 aa8.32□□□□□ -1.08
COL5A1-205ENST00000464187 PRR4Q16378 134 aa8.31□□□□□ -1.08
COL5A1-205ENST00000464187 C4orf48Q5BLP8 95 aa8.31□□□□□ -1.08
COL5A1-205ENST00000464187 BIRC6Q9NR09 4857 aa8.31□□□□□ -1.08
COL5A1-205ENST00000464187 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
COL5A1-205ENST00000464187 SPINK1P00995 79 aa8.29□□□□□ -1.08
COL5A1-205ENST00000464187 KRTAP4-5Q9BYR2 181 aa8.29□□□□□ -1.08
COL5A1-205ENST00000464187 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
COL5A1-205ENST00000464187 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
COL5A1-205ENST00000464187 MYCBP2O75592 4640 aa8.28□□□□□ -1.08
COL5A1-205ENST00000464187 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
COL5A1-205ENST00000464187 C8orf87E5RJ46 101 aa8.26□□□□□ -1.09
COL5A1-205ENST00000464187 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
COL5A1-205ENST00000464187 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
COL5A1-205ENST00000464187 TNXBP22105 4242 aa8.26□□□□□ -1.09
COL5A1-205ENST00000464187 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
COL5A1-205ENST00000464187 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
COL5A1-205ENST00000464187 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
COL5A1-205ENST00000464187 PCOTHQ58A44 107 aa8.22□□□□□ -1.09
COL5A1-205ENST00000464187 LINC00313P59037 77 aa8.21□□□□□ -1.1
COL5A1-205ENST00000464187 KRTAP13-3Q3SY46 172 aa8.21□□□□□ -1.1
COL5A1-205ENST00000464187 Q5W150 140 aa8.2□□□□□ -1.1
COL5A1-205ENST00000464187 HERC2O95714 4834 aa8.2□□□□□ -1.1
COL5A1-205ENST00000464187 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
COL5A1-205ENST00000464187 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
COL5A1-205ENST00000464187 SVIPQ8NHG7 77 aa8.17□□□□□ -1.1
COL5A1-205ENST00000464187 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
COL5A1-205ENST00000464187 LOC101927531A0A1B0GV80 90 aa8.15□□□□□ -1.11
COL5A1-205ENST00000464187 KRTAP16-1A8MUX0 517 aa8.15□□□□□ -1.11
COL5A1-205ENST00000464187 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.11
COL5A1-205ENST00000464187 ABCA13Q86UQ4 5058 aa8.13□□□□□ -1.11
COL5A1-205ENST00000464187 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
COL5A1-205ENST00000464187 Q1T7F1 81 aa8.1□□□□□ -1.11
COL5A1-205ENST00000464187 COA5Q86WW8 74 aa8.09□□□□□ -1.11
COL5A1-205ENST00000464187 RETNLBQ9BQ08 111 aa8.09□□□□□ -1.11
COL5A1-205ENST00000464187 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
COL5A1-205ENST00000464187 HRES1P13985 223 aa8.01□□□□□ -1.13
COL5A1-205ENST00000464187 V9GYY9 64 aa8□□□□□ -1.13
COL5A1-205ENST00000464187 J3QL48 77 aa7.99□□□□□ -1.13
COL5A1-205ENST00000464187 PSPHP1O15172 72 aa7.99□□□□□ -1.13
COL5A1-205ENST00000464187 A8MUN3 132 aa7.95□□□□□ -1.14
COL5A1-205ENST00000464187 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
COL5A1-205ENST00000464187 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
COL5A1-205ENST00000464187 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
COL5A1-205ENST00000464187 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
COL5A1-205ENST00000464187 Q5VV11 94 aa7.92□□□□□ -1.14
COL5A1-205ENST00000464187 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
COL5A1-205ENST00000464187 PCLOQ9Y6V0 5065 aa7.91□□□□□ -1.14
COL5A1-205ENST00000464187 ACYP2P14621 99 aa7.9□□□□□ -1.14
COL5A1-205ENST00000464187 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
COL5A1-205ENST00000464187 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
COL5A1-205ENST00000464187 A8MUU9 505 aa7.85□□□□□ -1.15
COL5A1-205ENST00000464187 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
COL5A1-205ENST00000464187 C7orf65Q6ZTY9 151 aa7.83□□□□□ -1.16
COL5A1-205ENST00000464187 Q75L30 129 aa7.82□□□□□ -1.16
COL5A1-205ENST00000464187 CHKB-CPT1BH3BT56 60 aa7.8□□□□□ -1.16
COL5A1-205ENST00000464187 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
COL5A1-205ENST00000464187 XP32Q5T750 250 aa7.77□□□□□ -1.17
COL5A1-205ENST00000464187 LPAP08519 4548 aa7.76□□□□□ -1.17
COL5A1-205ENST00000464187 HERC1Q15751 4861 aa7.75□□□□□ -1.17
COL5A1-205ENST00000464187 A8MU10 97 aa7.72□□□□□ -1.17
COL5A1-205ENST00000464187 A6NED7 52 aa7.71□□□□□ -1.18
COL5A1-205ENST00000464187 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
COL5A1-205ENST00000464187 LRP2P98164 4655 aa7.68□□□□□ -1.18
COL5A1-205ENST00000464187 ATP11AUNQ6ZP68 121 aa7.66□□□□□ -1.18
COL5A1-205ENST00000464187 LCA10Q71F78 164 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms