RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 H1FX-AS1Q4G0G2 97 aa6.7□□□□□ -1.34
SMC1A-204ENST00000463684 J3KT08 172 aa6.69□□□□□ -1.34
SMC1A-204ENST00000463684 TMEM256-PLSCR3K7ERE1 68 aa6.69□□□□□ -1.34
SMC1A-204ENST00000463684 COX8AP10176 69 aa6.69□□□□□ -1.34
SMC1A-204ENST00000463684 S100A2P29034 98 aa6.69□□□□□ -1.34
SMC1A-204ENST00000463684 VPS25Q9BRG1 176 aa6.68□□□□□ -1.34
SMC1A-204ENST00000463684 NDUFB1O75438 58 aa6.67□□□□□ -1.34
SMC1A-204ENST00000463684 DSCR8Q96T75 97 aa6.67□□□□□ -1.34
SMC1A-204ENST00000463684 HIST1H2BLQ99880 126 aa6.67□□□□□ -1.34
SMC1A-204ENST00000463684 PRO1854Q9UHT4 67 aa6.67□□□□□ -1.34
SMC1A-204ENST00000463684 DLEU1O43261 78 aa6.66□□□□□ -1.34
SMC1A-204ENST00000463684 TRIAP1O43715 76 aa6.65□□□□□ -1.34
SMC1A-204ENST00000463684 HIST3H2BBQ8N257 126 aa6.65□□□□□ -1.34
SMC1A-204ENST00000463684 IGKV3D-7A0A0C4DH55 119 aa6.63□□□□□ -1.35
SMC1A-204ENST00000463684 HIGD1BQ9P298 99 aa6.63□□□□□ -1.35
SMC1A-204ENST00000463684 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
SMC1A-204ENST00000463684 KRTAP5-9P26371 169 aa6.61□□□□□ -1.35
SMC1A-204ENST00000463684 UBE2V1Q13404 147 aa6.61□□□□□ -1.35
SMC1A-204ENST00000463684 C21orf62-AS1Q17RA5 79 aa6.61□□□□□ -1.35
SMC1A-204ENST00000463684 C14orf144Q96I85 54 aa6.61□□□□□ -1.35
SMC1A-204ENST00000463684 C8orf17Q9NRJ1 99 aa6.61□□□□□ -1.35
SMC1A-204ENST00000463684 Q5VV11 94 aa6.6□□□□□ -1.35
SMC1A-204ENST00000463684 CEND1Q8N111 149 aa6.6□□□□□ -1.35
SMC1A-204ENST00000463684 RBM3P98179 157 aaKnown RBP6.59□□□□□ -1.35
SMC1A-204ENST00000463684 PSMB2P49721 201 aa6.58□□□□□ -1.36
SMC1A-204ENST00000463684 MT1BP07438 61 aa6.57□□□□□ -1.36
SMC1A-204ENST00000463684 Q6ZVQ6 151 aa6.57□□□□□ -1.36
SMC1A-204ENST00000463684 FAM236AA0A1B0GUQ0 79 aa6.56□□□□□ -1.36
SMC1A-204ENST00000463684 FAM236BA0A1B0GV22 79 aa6.56□□□□□ -1.36
SMC1A-204ENST00000463684 COX6CP09669 75 aa6.56□□□□□ -1.36
SMC1A-204ENST00000463684 KRTAP2-3P0C7H8 128 aa6.56□□□□□ -1.36
SMC1A-204ENST00000463684 KRTAP2-4Q9BYR9 128 aa6.56□□□□□ -1.36
SMC1A-204ENST00000463684 Q6ZQT0 140 aa6.55□□□□□ -1.36
SMC1A-204ENST00000463684 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
SMC1A-204ENST00000463684 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
SMC1A-204ENST00000463684 C2orf91Q6ZV80 131 aa6.54□□□□□ -1.36
SMC1A-204ENST00000463684 KMT2DO14686 5537 aa6.54□□□□□ -1.36
SMC1A-204ENST00000463684 C9JAW5 83 aa6.53□□□□□ -1.36
SMC1A-204ENST00000463684 FXYD2P54710 66 aa6.53□□□□□ -1.36
SMC1A-204ENST00000463684 S100A6P06703 90 aa6.51□□□□□ -1.37
SMC1A-204ENST00000463684 KRTAP19-8Q3LI54 63 aa6.5□□□□□ -1.37
SMC1A-204ENST00000463684 SPATA45Q537H7 98 aa6.5□□□□□ -1.37
SMC1A-204ENST00000463684 PAM16Q9Y3D7 125 aa6.5□□□□□ -1.37
SMC1A-204ENST00000463684 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
SMC1A-204ENST00000463684 IGKV2-30P06310 120 aa6.48□□□□□ -1.37
SMC1A-204ENST00000463684 MRPL34Q9BQ48 92 aaKnown RBP6.48□□□□□ -1.37
SMC1A-204ENST00000463684 NDUFS5O43920 106 aa6.47□□□□□ -1.37
SMC1A-204ENST00000463684 C5orf47Q569G3 176 aa6.47□□□□□ -1.37
SMC1A-204ENST00000463684 TMEM254Q8TBM7 123 aa6.47□□□□□ -1.37
SMC1A-204ENST00000463684 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
SMC1A-204ENST00000463684 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
SMC1A-204ENST00000463684 C7orf65Q6ZTY9 151 aa6.45□□□□□ -1.38
SMC1A-204ENST00000463684 K7ERJ3 54 aa6.44□□□□□ -1.38
SMC1A-204ENST00000463684 VAMP8Q9BV40 100 aa6.44□□□□□ -1.38
SMC1A-204ENST00000463684 A0A1B0GW54 56 aa6.43□□□□□ -1.38
SMC1A-204ENST00000463684 BAALC-AS2P0C853 105 aa6.43□□□□□ -1.38
SMC1A-204ENST00000463684 SCGB1C2P0DMR2 95 aa6.42□□□□□ -1.38
SMC1A-204ENST00000463684 S100A1P23297 94 aa6.42□□□□□ -1.38
SMC1A-204ENST00000463684 IMUPQ9GZP8 106 aa6.42□□□□□ -1.38
SMC1A-204ENST00000463684 MMP24-AS1A0A0U1RRL7 71 aa6.41□□□□□ -1.38
SMC1A-204ENST00000463684 C4orf26Q17RF5 130 aa6.41□□□□□ -1.38
SMC1A-204ENST00000463684 hDV103S1A0JD37 113 aa6.4□□□□□ -1.38
SMC1A-204ENST00000463684 HSD52Q0P140 79 aa6.38□□□□□ -1.39
SMC1A-204ENST00000463684 CSAG1Q6PB30 78 aa6.38□□□□□ -1.39
SMC1A-204ENST00000463684 NREPQ16612 68 aa6.37□□□□□ -1.39
SMC1A-204ENST00000463684 JMJD7-PLA2G4BH0Y9G9 81 aa6.36□□□□□ -1.39
SMC1A-204ENST00000463684 SPRR2EP22531 72 aa6.36□□□□□ -1.39
SMC1A-204ENST00000463684 SPRR2BP35325 72 aa6.36□□□□□ -1.39
SMC1A-204ENST00000463684 SPRR2AP35326 72 aa6.36□□□□□ -1.39
SMC1A-204ENST00000463684 Q5W150 140 aa6.36□□□□□ -1.39
SMC1A-204ENST00000463684 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
SMC1A-204ENST00000463684 PDE6GP18545 87 aa6.35□□□□□ -1.39
SMC1A-204ENST00000463684 S4R3F8 94 aa6.35□□□□□ -1.39
SMC1A-204ENST00000463684 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.39
SMC1A-204ENST00000463684 KLKP1Q107X0 134 aa6.33□□□□□ -1.4
SMC1A-204ENST00000463684 KRTAP2-2Q9BYT5 123 aa6.32□□□□□ -1.4
SMC1A-204ENST00000463684 KRTAP2-1Q9BYU5 128 aa6.32□□□□□ -1.4
SMC1A-204ENST00000463684 K7EQZ3 153 aa6.31□□□□□ -1.4
SMC1A-204ENST00000463684 LCA10Q71F78 164 aa6.29□□□□□ -1.4
SMC1A-204ENST00000463684 C14orf132Q9NPU4 83 aa6.28□□□□□ -1.4
SMC1A-204ENST00000463684 KRTAP3-1Q9BYR8 98 aa6.27□□□□□ -1.41
SMC1A-204ENST00000463684 ATXN8Q156A1 80 aa6.26□□□□□ -1.41
SMC1A-204ENST00000463684 HCG22E2RYF7 251 aa6.24□□□□□ -1.41
SMC1A-204ENST00000463684 C1orf64Q8NEQ6 169 aa6.24□□□□□ -1.41
SMC1A-204ENST00000463684 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
SMC1A-204ENST00000463684 CASC2Q6XLA1 102 aa6.22□□□□□ -1.41
SMC1A-204ENST00000463684 CXCL6P80162 114 aa6.21□□□□□ -1.42
SMC1A-204ENST00000463684 BPY2O14599 106 aa6.2□□□□□ -1.42
SMC1A-204ENST00000463684 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
SMC1A-204ENST00000463684 KRTAP8-1Q8IUC2 63 aa6.18□□□□□ -1.42
SMC1A-204ENST00000463684 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
SMC1A-204ENST00000463684 SPRR2DP22532 72 aa6.16□□□□□ -1.42
SMC1A-204ENST00000463684 UQCR10Q9UDW1 63 aa6.16□□□□□ -1.42
SMC1A-204ENST00000463684 Q8N9L7 120 aa6.13□□□□□ -1.43
SMC1A-204ENST00000463684 PYY3Q5JQD4 70 aa6.1□□□□□ -1.43
SMC1A-204ENST00000463684 NAA38Q9BRA0 125 aaKnown RBP6.1□□□□□ -1.43
SMC1A-204ENST00000463684 H3BS24 57 aa6.06□□□□□ -1.44
SMC1A-204ENST00000463684 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
SMC1A-204ENST00000463684 MT1XP80297 61 aa6.05□□□□□ -1.44
SMC1A-204ENST00000463684 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms