RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 H0YGX0 51 aa2.05□□□□□ -2.08
SCFD1-204ENST00000463622 FABP2P12104 132 aa2.05□□□□□ -2.08
SCFD1-204ENST00000463622 SPRR1BP22528 89 aa2.05□□□□□ -2.08
SCFD1-204ENST00000463622 DHRS4-AS1Q9P1J3 65 aa2.05□□□□□ -2.08
SCFD1-204ENST00000463622 TRACP01848 142 aa2.05□□□□□ -2.08
SCFD1-204ENST00000463622 ATXN8Q156A1 80 aa2.05□□□□□ -2.08
SCFD1-204ENST00000463622 VAMP3Q15836 100 aa2.05□□□□□ -2.08
SCFD1-204ENST00000463622 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-204ENST00000463622 COX6CP09669 75 aa2.04□□□□□ -2.08
SCFD1-204ENST00000463622 BAALC-AS2P0C853 105 aa2.04□□□□□ -2.08
SCFD1-204ENST00000463622 MOBPQ13875 183 aa2.04□□□□□ -2.08
SCFD1-204ENST00000463622 TEX49A0A1B0GTD5 131 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 A0A1B0GX51 115 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 ORMDL1Q9P0S3 153 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 CBY1Q9Y3M2 126 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 TRBV20-1A0A075B6N2 111 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 SLC25A20O43772 301 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 IGFL1Q6UW32 110 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 ANKRD29Q8N6D5 301 aa2.03□□□□□ -2.08
SCFD1-204ENST00000463622 A0A1W2PNM2 257 aa2.02□□□□□ -2.09
SCFD1-204ENST00000463622 DNAL4O96015 105 aa2.02□□□□□ -2.09
SCFD1-204ENST00000463622 FAM229BQ4G0N7 80 aa2.02□□□□□ -2.09
SCFD1-204ENST00000463622 C9orf153Q5TBE3 101 aa2.02□□□□□ -2.09
SCFD1-204ENST00000463622 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
SCFD1-204ENST00000463622 ZNF706Q9Y5V0 76 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-204ENST00000463622 IGLV8-61A0A075B6I0 122 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 CRYGAP11844 174 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 OCIAD2Q56VL3 154 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 LYRM7Q5U5X0 104 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 OBSCN-AS1Q96MR7 158 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 C14orf132Q9NPU4 83 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 TRBV7-4A0A0J9YYF1 115 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 H3BT86 120 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 TPRXLQ17RH7 258 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 ETDBQ3ZM63 59 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 LAMTOR3Q9UHA4 124 aa2.01□□□□□ -2.09
SCFD1-204ENST00000463622 TMEM256-PLSCR3K7ERE1 68 aa2□□□□□ -2.09
SCFD1-204ENST00000463622 Q6ZQT0 140 aa2□□□□□ -2.09
SCFD1-204ENST00000463622 GTF2H5Q6ZYL4 71 aa2□□□□□ -2.09
SCFD1-204ENST00000463622 RETNLBQ9BQ08 111 aa2□□□□□ -2.09
SCFD1-204ENST00000463622 Q6ZVQ6 151 aa1.99□□□□□ -2.09
SCFD1-204ENST00000463622 LINC00304Q8N9R0 145 aa1.99□□□□□ -2.09
SCFD1-204ENST00000463622 PPDPFLQ8WWR9 84 aa1.99□□□□□ -2.09
SCFD1-204ENST00000463622 KRTAP4-1Q9BYQ7 146 aa1.99□□□□□ -2.09
SCFD1-204ENST00000463622 TEN1Q86WV5 123 aa1.99□□□□□ -2.09
SCFD1-204ENST00000463622 A0A087WSZ3 146 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 TRBV7-7A0A0K0K1E9 115 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 F8W1H4 67 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 F8WEM9 126 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 CCKP06307 115 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 RBM3P98179 157 aaKnown RBP1.98□□□□□ -2.09
SCFD1-204ENST00000463622 ASB16-AS1Q495Z4 193 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 SSBP3-AS1Q7Z2R9 100 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 Q96NJ1 140 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 VPS25Q9BRG1 176 aa1.98□□□□□ -2.09
SCFD1-204ENST00000463622 LOC110117498A0A087WWA1 95 aa1.97□□□□□ -2.09
SCFD1-204ENST00000463622 SNCGO76070 127 aa1.97□□□□□ -2.09
SCFD1-204ENST00000463622 DEFB116Q30KQ4 102 aa1.97□□□□□ -2.09
SCFD1-204ENST00000463622 KRTAP19-2Q3LHN2 52 aa1.97□□□□□ -2.09
SCFD1-204ENST00000463622 Q6JHZ5 121 aa1.97□□□□□ -2.09
SCFD1-204ENST00000463622 Q6Q795 121 aa1.97□□□□□ -2.09
SCFD1-204ENST00000463622 JMJD7-PLA2G4BH0Y9G9 81 aa1.96□□□□□ -2.1
SCFD1-204ENST00000463622 MT1HP80294 61 aa1.96□□□□□ -2.1
SCFD1-204ENST00000463622 C1orf195Q5TG92 126 aa1.96□□□□□ -2.1
SCFD1-204ENST00000463622 DSCR8Q96T75 97 aa1.96□□□□□ -2.1
SCFD1-204ENST00000463622 LINC00846Q9NV44 126 aa1.96□□□□□ -2.1
SCFD1-204ENST00000463622 H3BQ85 93 aa1.95□□□□□ -2.1
SCFD1-204ENST00000463622 CD164Q04900 197 aa1.95□□□□□ -2.1
SCFD1-204ENST00000463622 LINC00472Q9H8W2 130 aa1.95□□□□□ -2.1
SCFD1-204ENST00000463622 SPINK1P00995 79 aa1.95□□□□□ -2.1
SCFD1-204ENST00000463622 Q5XG85 94 aa1.94□□□□□ -2.1
SCFD1-204ENST00000463622 SPAG11AQ6PDA7 123 aa1.94□□□□□ -2.1
SCFD1-204ENST00000463622 Q8N9L7 120 aa1.94□□□□□ -2.1
SCFD1-204ENST00000463622 RPS29P62273 56 aaKnown RBP1.93□□□□□ -2.1
SCFD1-204ENST00000463622 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
SCFD1-204ENST00000463622 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
SCFD1-204ENST00000463622 FP248Q71RG6 208 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-204ENST00000463622 LCE3DQ9BYE3 92 aa1.93□□□□□ -2.1
SCFD1-204ENST00000463622 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
SCFD1-204ENST00000463622 BPY2O14599 106 aa1.93□□□□□ -2.1
SCFD1-204ENST00000463622 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-204ENST00000463622 IGKV3D-7A0A0C4DH55 119 aa1.92□□□□□ -2.1
SCFD1-204ENST00000463622 C9orf92A6NGG3 77 aa1.92□□□□□ -2.1
SCFD1-204ENST00000463622 K7EQZ3 153 aa1.92□□□□□ -2.1
SCFD1-204ENST00000463622 IGKV4-1P06312 121 aa1.92□□□□□ -2.1
SCFD1-204ENST00000463622 PDE6GP18545 87 aa1.92□□□□□ -2.1
SCFD1-204ENST00000463622 LIMD2Q9BT23 127 aa1.92□□□□□ -2.1
SCFD1-204ENST00000463622 SIGMAR1Q99720 223 aa1.91□□□□□ -2.1
SCFD1-204ENST00000463622 USH2AO75445 5202 aa1.91□□□□□ -2.1
SCFD1-204ENST00000463622 NREPQ16612 68 aa1.91□□□□□ -2.1
SCFD1-204ENST00000463622 IGHV6-1A0A0B4J1U7 121 aa1.9□□□□□ -2.11
SCFD1-204ENST00000463622 FAM240AA0A1B0GVK7 77 aa1.9□□□□□ -2.11
SCFD1-204ENST00000463622 SS18L2Q9UHA2 77 aa1.9□□□□□ -2.11
SCFD1-204ENST00000463622 A0A087WVE0 104 aa1.89□□□□□ -2.11
SCFD1-204ENST00000463622 MMP24-AS1A0A0U1RRL7 71 aa1.89□□□□□ -2.11
SCFD1-204ENST00000463622 A0A1B0GVX0 72 aa1.89□□□□□ -2.11
SCFD1-204ENST00000463622 MT-ATP8P03928 68 aa1.89□□□□□ -2.11
SCFD1-204ENST00000463622 A0A1B0GW54 56 aa1.89□□□□□ -2.11
SCFD1-204ENST00000463622 A8MWP4 228 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms