RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 SMR3BP02814 79 aaPredicted RBP5.89□□□□□ -1.47
MSH5-211ENST00000463144 SPINK6Q6UWN8 80 aa5.89□□□□□ -1.47
MSH5-211ENST00000463144 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
MSH5-211ENST00000463144 OXTP01178 125 aa5.88□□□□□ -1.47
MSH5-211ENST00000463144 PLA2G1BP04054 148 aaKnown RBP5.87□□□□□ -1.47
MSH5-211ENST00000463144 CDK2AP2O75956 126 aa5.87□□□□□ -1.47
MSH5-211ENST00000463144 FAT1Q14517 4588 aa5.87□□□□□ -1.47
MSH5-211ENST00000463144 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
MSH5-211ENST00000463144 Q5XG85 94 aa5.85□□□□□ -1.47
MSH5-211ENST00000463144 H0Y9P7 68 aa5.85□□□□□ -1.47
MSH5-211ENST00000463144 C1orf195Q5TG92 126 aa5.85□□□□□ -1.47
MSH5-211ENST00000463144 MP68P56378 58 aa5.83□□□□□ -1.48
MSH5-211ENST00000463144 LINC00208Q96KT6 92 aa5.83□□□□□ -1.48
MSH5-211ENST00000463144 TYMSOSQ8TAI1 123 aa5.83□□□□□ -1.48
MSH5-211ENST00000463144 MRPL34Q9BQ48 92 aaKnown RBP5.83□□□□□ -1.48
MSH5-211ENST00000463144 PRR26Q8N8Z3 221 aa5.81□□□□□ -1.48
MSH5-211ENST00000463144 SERP1Q9Y6X1 66 aa5.81□□□□□ -1.48
MSH5-211ENST00000463144 TRAV22A0A0B4J277 110 aa5.81□□□□□ -1.48
MSH5-211ENST00000463144 ATP5EP56381 51 aaPredicted RBP5.81□□□□□ -1.48
MSH5-211ENST00000463144 H3BPC8 53 aa5.8□□□□□ -1.48
MSH5-211ENST00000463144 TP53AIP1Q9HCN2 124 aa5.8□□□□□ -1.48
MSH5-211ENST00000463144 NDUFS5O43920 106 aa5.79□□□□□ -1.48
MSH5-211ENST00000463144 C1orf64Q8NEQ6 169 aa5.79□□□□□ -1.48
MSH5-211ENST00000463144 LIMD2Q9BT23 127 aa5.78□□□□□ -1.48
MSH5-211ENST00000463144 C4orf48Q5BLP8 95 aa5.78□□□□□ -1.48
MSH5-211ENST00000463144 C8orf87E5RJ46 101 aa5.77□□□□□ -1.49
MSH5-211ENST00000463144 SPINK1P00995 79 aa5.77□□□□□ -1.49
MSH5-211ENST00000463144 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
MSH5-211ENST00000463144 LINC00313P59037 77 aa5.76□□□□□ -1.49
MSH5-211ENST00000463144 Q5W150 140 aa5.76□□□□□ -1.49
MSH5-211ENST00000463144 PKHD1L1Q86WI1 4243 aa5.75□□□□□ -1.49
MSH5-211ENST00000463144 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
MSH5-211ENST00000463144 SEC61GP60059 68 aa5.74□□□□□ -1.49
MSH5-211ENST00000463144 PRR4Q16378 134 aa5.74□□□□□ -1.49
MSH5-211ENST00000463144 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
MSH5-211ENST00000463144 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
MSH5-211ENST00000463144 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
MSH5-211ENST00000463144 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
MSH5-211ENST00000463144 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.5
MSH5-211ENST00000463144 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
MSH5-211ENST00000463144 HSPG2P98160 4391 aa5.71□□□□□ -1.5
MSH5-211ENST00000463144 SPANXA2-OT1Q8N9U9 137 aa5.71□□□□□ -1.5
MSH5-211ENST00000463144 BIRC6Q9NR09 4857 aa5.7□□□□□ -1.5
MSH5-211ENST00000463144 PCOTHQ58A44 107 aa5.7□□□□□ -1.5
MSH5-211ENST00000463144 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
MSH5-211ENST00000463144 RYR1P21817 5038 aa5.69□□□□□ -1.5
MSH5-211ENST00000463144 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
MSH5-211ENST00000463144 IGLV7-46A0A075B6I9 117 aa5.67□□□□□ -1.5
MSH5-211ENST00000463144 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
MSH5-211ENST00000463144 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
MSH5-211ENST00000463144 C4orf26Q17RF5 130 aa5.66□□□□□ -1.5
MSH5-211ENST00000463144 RETNLBQ9BQ08 111 aa5.66□□□□□ -1.5
MSH5-211ENST00000463144 LOC101927531A0A1B0GV80 90 aa5.65□□□□□ -1.5
MSH5-211ENST00000463144 LRP1Q07954 4544 aaKnown RBP5.65□□□□□ -1.5
MSH5-211ENST00000463144 Q5VSD8 79 aa5.64□□□□□ -1.51
MSH5-211ENST00000463144 TNXBP22105 4242 aa5.63□□□□□ -1.51
MSH5-211ENST00000463144 KIAA1109Q2LD37 5005 aa5.62□□□□□ -1.51
MSH5-211ENST00000463144 Q8N1X5 172 aa5.61□□□□□ -1.51
MSH5-211ENST00000463144 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
MSH5-211ENST00000463144 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
MSH5-211ENST00000463144 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
MSH5-211ENST00000463144 V9GYY9 64 aa5.6□□□□□ -1.51
MSH5-211ENST00000463144 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
MSH5-211ENST00000463144 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
MSH5-211ENST00000463144 FLG2Q5D862 2391 aaPredicted RBP5.58□□□□□ -1.52
MSH5-211ENST00000463144 HERC2O95714 4834 aa5.58□□□□□ -1.52
MSH5-211ENST00000463144 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
MSH5-211ENST00000463144 COA5Q86WW8 74 aa5.57□□□□□ -1.52
MSH5-211ENST00000463144 HRES1P13985 223 aa5.57□□□□□ -1.52
MSH5-211ENST00000463144 Q1T7F1 81 aa5.54□□□□□ -1.52
MSH5-211ENST00000463144 IGKV2D-30A0A075B6S6 120 aa5.54□□□□□ -1.52
MSH5-211ENST00000463144 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
MSH5-211ENST00000463144 A8MUU9 505 aa5.53□□□□□ -1.52
MSH5-211ENST00000463144 MYCBP2O75592 4640 aa5.5□□□□□ -1.53
MSH5-211ENST00000463144 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
MSH5-211ENST00000463144 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
MSH5-211ENST00000463144 ACYP2P14621 99 aa5.47□□□□□ -1.53
MSH5-211ENST00000463144 PSPHP1O15172 72 aa5.46□□□□□ -1.53
MSH5-211ENST00000463144 C7orf65Q6ZTY9 151 aa5.46□□□□□ -1.53
MSH5-211ENST00000463144 A8MUN3 132 aa5.45□□□□□ -1.54
MSH5-211ENST00000463144 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
MSH5-211ENST00000463144 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
MSH5-211ENST00000463144 Q75L30 129 aa5.44□□□□□ -1.54
MSH5-211ENST00000463144 ABCA13Q86UQ4 5058 aa5.42□□□□□ -1.54
MSH5-211ENST00000463144 Q5VV11 94 aa5.41□□□□□ -1.54
MSH5-211ENST00000463144 LINC01558Q9Y6Z2 57 aa5.4□□□□□ -1.54
MSH5-211ENST00000463144 PRR15LQ9BU68 103 aa5.4□□□□□ -1.55
MSH5-211ENST00000463144 SPINK7P58062 85 aa5.39□□□□□ -1.55
MSH5-211ENST00000463144 CHKB-CPT1BH3BT56 60 aa5.38□□□□□ -1.55
MSH5-211ENST00000463144 XP32Q5T750 250 aa5.37□□□□□ -1.55
MSH5-211ENST00000463144 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
MSH5-211ENST00000463144 RPL37P61927 97 aaKnown RBP5.36□□□□□ -1.55
MSH5-211ENST00000463144 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
MSH5-211ENST00000463144 ATP11AUNQ6ZP68 121 aa5.34□□□□□ -1.56
MSH5-211ENST00000463144 PCLOQ9Y6V0 5065 aa5.32□□□□□ -1.56
MSH5-211ENST00000463144 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
MSH5-211ENST00000463144 A8MU10 97 aa5.3□□□□□ -1.56
MSH5-211ENST00000463144 COX6B2Q6YFQ2 88 aa5.27□□□□□ -1.57
MSH5-211ENST00000463144 LPAP08519 4548 aa5.27□□□□□ -1.57
MSH5-211ENST00000463144 LRP2P98164 4655 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms