RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 FCER1GP30273 86 aa-0.31□□□□□ -2.46
GPNMB-205ENST00000463011 CCDC180Q9P1Z9 1646 aa-0.31□□□□□ -2.46
GPNMB-205ENST00000463011 SRRM2Q9UQ35 2752 aaKnown RBP-0.32□□□□□ -2.46
GPNMB-205ENST00000463011 FASNP49327 2511 aaKnown RBP-0.32□□□□□ -2.46
GPNMB-205ENST00000463011 MAP1AP78559 2803 aaPredicted RBP-0.32□□□□□ -2.46
GPNMB-205ENST00000463011 DSPP15924 2871 aaKnown RBP-0.33□□□□□ -2.46
GPNMB-205ENST00000463011 PDZD2O15018 2839 aa-0.33□□□□□ -2.46
GPNMB-205ENST00000463011 ABCA6Q8N139 1617 aa-0.34□□□□□ -2.46
GPNMB-205ENST00000463011 COL6A5A8TX70 2615 aa-0.35□□□□□ -2.47
GPNMB-205ENST00000463011 SFTA3P0C7M3 94 aa-0.35□□□□□ -2.47
GPNMB-205ENST00000463011 PRRC2CQ9Y520 2896 aaKnown RBP-0.36□□□□□ -2.47
GPNMB-205ENST00000463011 FAT3Q8TDW7 4589 aa-0.36□□□□□ -2.47
GPNMB-205ENST00000463011 M0R1W7 72 aa-0.36□□□□□ -2.47
GPNMB-205ENST00000463011 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.36□□□□□ -2.47
GPNMB-205ENST00000463011 LYSTQ99698 3801 aa-0.36□□□□□ -2.47
GPNMB-205ENST00000463011 TOGARAM1Q9Y4F4 1720 aa-0.37□□□□□ -2.47
GPNMB-205ENST00000463011 K7EMI3 77 aa-0.37□□□□□ -2.47
GPNMB-205ENST00000463011 MT1AP04731 61 aa-0.37□□□□□ -2.47
GPNMB-205ENST00000463011 SPRR2FQ96RM1 72 aa-0.37□□□□□ -2.47
GPNMB-205ENST00000463011 S100ZQ8WXG8 99 aa-0.38□□□□□ -2.47
GPNMB-205ENST00000463011 HERC2O95714 4834 aa-0.38□□□□□ -2.47
GPNMB-205ENST00000463011 CLASP1Q7Z460 1538 aa-0.38□□□□□ -2.47
GPNMB-205ENST00000463011 SMIM31A0A1B0GVY4 71 aa-0.39□□□□□ -2.47
GPNMB-205ENST00000463011 NBEAL1Q6ZS30 2694 aa-0.39□□□□□ -2.47
GPNMB-205ENST00000463011 DNAH9Q9NYC9 4486 aa-0.4□□□□□ -2.47
GPNMB-205ENST00000463011 GLI2P10070 1586 aa-0.4□□□□□ -2.47
GPNMB-205ENST00000463011 LAMA5O15230 3695 aa-0.4□□□□□ -2.47
GPNMB-205ENST00000463011 H3BUA1 57 aa-0.41□□□□□ -2.48
GPNMB-205ENST00000463011 DEFB110Q30KQ9 67 aa-0.41□□□□□ -2.48
GPNMB-205ENST00000463011 TIAM1Q13009 1591 aa-0.41□□□□□ -2.48
GPNMB-205ENST00000463011 PKD1L2Q7Z442 2459 aa-0.42□□□□□ -2.48
GPNMB-205ENST00000463011 CUBNO60494 3623 aa-0.42□□□□□ -2.48
GPNMB-205ENST00000463011 KRTAP19-8Q3LI54 63 aa-0.42□□□□□ -2.48
GPNMB-205ENST00000463011 NMES1Q9C002 83 aa-0.42□□□□□ -2.48
GPNMB-205ENST00000463011 CROCC2H7BZ55 1655 aa-0.43□□□□□ -2.48
GPNMB-205ENST00000463011 DNAH6Q9C0G6 4158 aa-0.43□□□□□ -2.48
GPNMB-205ENST00000463011 SERF2P84101 59 aa-0.43□□□□□ -2.48
GPNMB-205ENST00000463011 NF1P21359 2839 aa-0.43□□□□□ -2.48
GPNMB-205ENST00000463011 LY75O60449 1722 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 SPG11Q96JI7 2443 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 EEA1Q15075 1411 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 IGLV5-48A0A075B6I7 105 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 ANK3Q12955 4377 aaKnown RBP-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 PKHD1L1Q86WI1 4243 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 TGP01266 2768 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 CEP290O15078 2479 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 CDC42BPAQ5VT25 1732 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 VPS13BQ7Z7G8 4022 aa-0.44□□□□□ -2.48
GPNMB-205ENST00000463011 BPTFQ12830 3046 aa-0.45□□□□□ -2.48
GPNMB-205ENST00000463011 ACACBO00763 2458 aa-0.45□□□□□ -2.48
GPNMB-205ENST00000463011 ABCA10Q8WWZ4 1543 aa-0.45□□□□□ -2.48
GPNMB-205ENST00000463011 ANKRD11Q6UB99 2663 aaPredicted RBP-0.45□□□□□ -2.48
GPNMB-205ENST00000463011 APOBP04114 4563 aaKnown RBP-0.45□□□□□ -2.48
GPNMB-205ENST00000463011 DNHD1Q96M86 4753 aa-0.46□□□□□ -2.48
GPNMB-205ENST00000463011 CPS1P31327 1500 aa-0.46□□□□□ -2.48
GPNMB-205ENST00000463011 SMIM5Q71RC9 77 aa-0.46□□□□□ -2.48
GPNMB-205ENST00000463011 COL12A1Q99715 3063 aa-0.46□□□□□ -2.48
GPNMB-205ENST00000463011 UGGT1Q9NYU2 1555 aa-0.46□□□□□ -2.48
GPNMB-205ENST00000463011 FAT1Q14517 4588 aa-0.46□□□□□ -2.48
GPNMB-205ENST00000463011 MGAM2Q2M2H8 2515 aa-0.46□□□□□ -2.48
GPNMB-205ENST00000463011 USP9YO00507 2555 aaPredicted RBP-0.47□□□□□ -2.48
GPNMB-205ENST00000463011 MYO18BQ8IUG5 2567 aa-0.47□□□□□ -2.48
GPNMB-205ENST00000463011 USP9XQ93008 2570 aaPredicted RBP-0.47□□□□□ -2.48
GPNMB-205ENST00000463011 STARD9Q9P2P6 4700 aa-0.47□□□□□ -2.48
GPNMB-205ENST00000463011 HTTP42858 3142 aa-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 AKAP9Q99996 3911 aa-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 IGIPA6NJ69 53 aa-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 NOP10Q9NPE3 64 aaKnown RBP-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 VPS13DQ5THJ4 4388 aa-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 GCN1Q92616 2671 aaKnown RBP-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 ZZEF1O43149 2961 aa-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 DMXL1Q9Y485 3027 aa-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 MTORP42345 2549 aa-0.48□□□□□ -2.49
GPNMB-205ENST00000463011 EPG5Q9HCE0 2579 aa-0.49□□□□□ -2.49
GPNMB-205ENST00000463011 NBPF19A0A087WUL8 3843 aa-0.49□□□□□ -2.49
GPNMB-205ENST00000463011 KRTAP20-2Q3LI61 65 aa-0.49□□□□□ -2.49
GPNMB-205ENST00000463011 MXRA5Q9NR99 2828 aa-0.49□□□□□ -2.49
GPNMB-205ENST00000463011 BIRC6Q9NR09 4857 aa-0.5□□□□□ -2.49
GPNMB-205ENST00000463011 TMEM167BQ9NRX6 74 aa-0.5□□□□□ -2.49
GPNMB-205ENST00000463011 DNAH3Q8TD57 4116 aa-0.5□□□□□ -2.49
GPNMB-205ENST00000463011 ALS2Q96Q42 1657 aa-0.5□□□□□ -2.49
GPNMB-205ENST00000463011 ERICH3Q5RHP9 1530 aa-0.51□□□□□ -2.49
GPNMB-205ENST00000463011 LINC00308Q8TCZ7 52 aa-0.51□□□□□ -2.49
GPNMB-205ENST00000463011 PRXQ9BXM0 1461 aa-0.51□□□□□ -2.49
GPNMB-205ENST00000463011 MMP24-AS1A0A0U1RRL7 71 aa-0.52□□□□□ -2.49
GPNMB-205ENST00000463011 MT4P47944 62 aa-0.52□□□□□ -2.49
GPNMB-205ENST00000463011 SACSQ9NZJ4 4579 aa-0.52□□□□□ -2.49
GPNMB-205ENST00000463011 DNAH11Q96DT5 4516 aa-0.53□□□□□ -2.49
GPNMB-205ENST00000463011 MUC17Q685J3 4493 aa-0.54□□□□□ -2.5
GPNMB-205ENST00000463011 ABRACLQ9P1F3 81 aa-0.54□□□□□ -2.5
GPNMB-205ENST00000463011 TACC2O95359 2948 aa-0.54□□□□□ -2.5
GPNMB-205ENST00000463011 TNP1P09430 55 aa-0.56□□□□□ -2.5
GPNMB-205ENST00000463011 KAAG1Q9UBP8 84 aa-0.56□□□□□ -2.5
GPNMB-205ENST00000463011 EFCAB6Q5THR3 1501 aa-0.57□□□□□ -2.5
GPNMB-205ENST00000463011 LAMA2P24043 3122 aaKnown RBP-0.57□□□□□ -2.5
GPNMB-205ENST00000463011 LAMA1P25391 3075 aa-0.58□□□□□ -2.5
GPNMB-205ENST00000463011 DNAH2Q9P225 4427 aa-0.58□□□□□ -2.5
GPNMB-205ENST00000463011 NIPBLQ6KC79 2804 aaeCLIP-0.59□□□□□ -2.5
GPNMB-205ENST00000463011 KALRNO60229 2985 aa-0.6□□□□□ -2.5
GPNMB-205ENST00000463011 CELSR3Q9NYQ7 3312 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms