RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 ATP5EP2Q5VTU8 51 aa4.79□□□□□ -1.64
RPA3-205ENST00000462723 SS18L2Q9UHA2 77 aa4.79□□□□□ -1.64
RPA3-205ENST00000462723 PKHD1L1Q86WI1 4243 aa4.77□□□□□ -1.65
RPA3-205ENST00000462723 BPY2O14599 106 aa4.76□□□□□ -1.65
RPA3-205ENST00000462723 MT-ATP8P03928 68 aa4.76□□□□□ -1.65
RPA3-205ENST00000462723 CXCL6P80162 114 aa4.76□□□□□ -1.65
RPA3-205ENST00000462723 IGKV3D-7A0A0C4DH55 119 aa4.75□□□□□ -1.65
RPA3-205ENST00000462723 SPAG11AQ6PDA7 123 aa4.75□□□□□ -1.65
RPA3-205ENST00000462723 LINC00304Q8N9R0 145 aa4.75□□□□□ -1.65
RPA3-205ENST00000462723 LIMD2Q9BT23 127 aa4.75□□□□□ -1.65
RPA3-205ENST00000462723 BIRC6Q9NR09 4857 aa4.75□□□□□ -1.65
RPA3-205ENST00000462723 SPINK1P00995 79 aa4.74□□□□□ -1.65
RPA3-205ENST00000462723 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
RPA3-205ENST00000462723 J3KT08 172 aa4.73□□□□□ -1.65
RPA3-205ENST00000462723 IMUPQ9GZP8 106 aa4.73□□□□□ -1.65
RPA3-205ENST00000462723 KRTAP29-1A8MX34 341 aaPredicted RBP4.72□□□□□ -1.65
RPA3-205ENST00000462723 RPS29P62273 56 aaKnown RBP4.72□□□□□ -1.65
RPA3-205ENST00000462723 ASB16-AS1Q495Z4 193 aa4.72□□□□□ -1.65
RPA3-205ENST00000462723 Q5XG85 94 aa4.72□□□□□ -1.65
RPA3-205ENST00000462723 LINC00472Q9H8W2 130 aa4.72□□□□□ -1.65
RPA3-205ENST00000462723 FLG2Q5D862 2391 aaPredicted RBP4.72□□□□□ -1.65
RPA3-205ENST00000462723 KRTAP10-8P60410 259 aa4.71□□□□□ -1.66
RPA3-205ENST00000462723 HIST1H4AP62805 103 aaKnown RBP4.71□□□□□ -1.66
RPA3-205ENST00000462723 DEFB116Q30KQ4 102 aa4.71□□□□□ -1.66
RPA3-205ENST00000462723 IGKV4-1P06312 121 aa4.7□□□□□ -1.66
RPA3-205ENST00000462723 NDUFB1O75438 58 aa4.69□□□□□ -1.66
RPA3-205ENST00000462723 OXTP01178 125 aa4.69□□□□□ -1.66
RPA3-205ENST00000462723 DSCR10P59022 87 aa4.69□□□□□ -1.66
RPA3-205ENST00000462723 Q96NJ1 140 aa4.69□□□□□ -1.66
RPA3-205ENST00000462723 A8MWP4 228 aa4.68□□□□□ -1.66
RPA3-205ENST00000462723 Q8N9L7 120 aa4.68□□□□□ -1.66
RPA3-205ENST00000462723 ANAPC13Q9BS18 74 aa4.68□□□□□ -1.66
RPA3-205ENST00000462723 C1orf195Q5TG92 126 aa4.67□□□□□ -1.66
RPA3-205ENST00000462723 HERC2O95714 4834 aa4.67□□□□□ -1.66
RPA3-205ENST00000462723 A0A087WVE0 104 aa4.66□□□□□ -1.66
RPA3-205ENST00000462723 K7EQZ3 153 aa4.66□□□□□ -1.66
RPA3-205ENST00000462723 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
RPA3-205ENST00000462723 LRP1Q07954 4544 aaKnown RBP4.66□□□□□ -1.66
RPA3-205ENST00000462723 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.66
RPA3-205ENST00000462723 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
RPA3-205ENST00000462723 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
RPA3-205ENST00000462723 MT1HL1P0DM35 61 aa4.64□□□□□ -1.67
RPA3-205ENST00000462723 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
RPA3-205ENST00000462723 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
RPA3-205ENST00000462723 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
RPA3-205ENST00000462723 FAM236AA0A1B0GUQ0 79 aa4.63□□□□□ -1.67
RPA3-205ENST00000462723 FAM236BA0A1B0GV22 79 aa4.63□□□□□ -1.67
RPA3-205ENST00000462723 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
RPA3-205ENST00000462723 TNXBP22105 4242 aa4.62□□□□□ -1.67
RPA3-205ENST00000462723 MYCBP2O75592 4640 aa4.62□□□□□ -1.67
RPA3-205ENST00000462723 DMBT1Q9UGM3 2413 aaPredicted RBP4.62□□□□□ -1.67
RPA3-205ENST00000462723 HCG22E2RYF7 251 aa4.62□□□□□ -1.67
RPA3-205ENST00000462723 C8orf87E5RJ46 101 aa4.6□□□□□ -1.67
RPA3-205ENST00000462723 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
RPA3-205ENST00000462723 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
RPA3-205ENST00000462723 WFDC13Q8IUB5 93 aa4.6□□□□□ -1.67
RPA3-205ENST00000462723 C8orf17Q9NRJ1 99 aa4.6□□□□□ -1.67
RPA3-205ENST00000462723 MMP24-AS1A0A0U1RRL7 71 aa4.59□□□□□ -1.67
RPA3-205ENST00000462723 ATOX1O00244 68 aa4.59□□□□□ -1.67
RPA3-205ENST00000462723 RETNLBQ9BQ08 111 aa4.59□□□□□ -1.67
RPA3-205ENST00000462723 hDV103S1A0JD37 113 aa4.58□□□□□ -1.68
RPA3-205ENST00000462723 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
RPA3-205ENST00000462723 LINC00313P59037 77 aa4.58□□□□□ -1.68
RPA3-205ENST00000462723 FP248Q71RG6 208 aaPredicted RBP4.58□□□□□ -1.68
RPA3-205ENST00000462723 SMIM20Q8N5G0 67 aa4.57□□□□□ -1.68
RPA3-205ENST00000462723 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
RPA3-205ENST00000462723 TMEM254Q8TBM7 123 aa4.56□□□□□ -1.68
RPA3-205ENST00000462723 UQCRQO14949 82 aa4.55□□□□□ -1.68
RPA3-205ENST00000462723 MRPL34Q9BQ48 92 aaKnown RBP4.55□□□□□ -1.68
RPA3-205ENST00000462723 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
RPA3-205ENST00000462723 TRAV7A0A075B6U4 112 aa4.53□□□□□ -1.68
RPA3-205ENST00000462723 NDUFS5O43920 106 aa4.53□□□□□ -1.68
RPA3-205ENST00000462723 COX7CP15954 63 aa4.52□□□□□ -1.69
RPA3-205ENST00000462723 PRR4Q16378 134 aa4.52□□□□□ -1.69
RPA3-205ENST00000462723 SERP2Q8N6R1 65 aa4.52□□□□□ -1.69
RPA3-205ENST00000462723 OCR1Q9BZK8 76 aa4.52□□□□□ -1.69
RPA3-205ENST00000462723 TP53AIP1Q9HCN2 124 aa4.52□□□□□ -1.69
RPA3-205ENST00000462723 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
RPA3-205ENST00000462723 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
RPA3-205ENST00000462723 PCLOQ9Y6V0 5065 aa4.5□□□□□ -1.69
RPA3-205ENST00000462723 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
RPA3-205ENST00000462723 KRTAP13-3Q3SY46 172 aa4.48□□□□□ -1.69
RPA3-205ENST00000462723 C5orf47Q569G3 176 aa4.47□□□□□ -1.69
RPA3-205ENST00000462723 MP68P56378 58 aa4.46□□□□□ -1.7
RPA3-205ENST00000462723 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
RPA3-205ENST00000462723 TRAV22A0A0B4J277 110 aa4.45□□□□□ -1.7
RPA3-205ENST00000462723 A8MUU9 505 aa4.45□□□□□ -1.7
RPA3-205ENST00000462723 H0Y9P7 68 aa4.45□□□□□ -1.7
RPA3-205ENST00000462723 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
RPA3-205ENST00000462723 TPRXLQ17RH7 258 aa4.45□□□□□ -1.7
RPA3-205ENST00000462723 TMEM258P61165 79 aa4.44□□□□□ -1.7
RPA3-205ENST00000462723 Q75L30 129 aa4.44□□□□□ -1.7
RPA3-205ENST00000462723 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
RPA3-205ENST00000462723 H3BPC8 53 aa4.43□□□□□ -1.7
RPA3-205ENST00000462723 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
RPA3-205ENST00000462723 Q5W150 140 aa4.42□□□□□ -1.7
RPA3-205ENST00000462723 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
RPA3-205ENST00000462723 A0A0U1RQV1 116 aa4.41□□□□□ -1.7
RPA3-205ENST00000462723 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
RPA3-205ENST00000462723 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms