RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ZNF706Q9Y5V0 76 aaPredicted RBP4.37□□□□□ -1.71
UBE4B-204ENST00000462658 TNXBP22105 4242 aa4.37□□□□□ -1.71
UBE4B-204ENST00000462658 F8WEM9 126 aa4.36□□□□□ -1.71
UBE4B-204ENST00000462658 KRTAP1-4P0C5Y4 121 aa4.36□□□□□ -1.71
UBE4B-204ENST00000462658 RPL37AP61513 92 aaKnown RBP4.36□□□□□ -1.71
UBE4B-204ENST00000462658 ANAPC13Q9BS18 74 aa4.36□□□□□ -1.71
UBE4B-204ENST00000462658 SS18L2Q9UHA2 77 aa4.36□□□□□ -1.71
UBE4B-204ENST00000462658 LOC110117498A0A087WWA1 95 aa4.35□□□□□ -1.71
UBE4B-204ENST00000462658 TRBV7-4A0A0J9YYF1 115 aa4.35□□□□□ -1.71
UBE4B-204ENST00000462658 CCKP06307 115 aa4.35□□□□□ -1.71
UBE4B-204ENST00000462658 PDE6GP18545 87 aa4.35□□□□□ -1.71
UBE4B-204ENST00000462658 Q6Q795 121 aa4.35□□□□□ -1.71
UBE4B-204ENST00000462658 CXCL6P80162 114 aa4.34□□□□□ -1.71
UBE4B-204ENST00000462658 LINC00483Q53H64 154 aa4.34□□□□□ -1.71
UBE4B-204ENST00000462658 Q6ZQT0 140 aa4.34□□□□□ -1.71
UBE4B-204ENST00000462658 IGLV8-61A0A075B6I0 122 aa4.33□□□□□ -1.72
UBE4B-204ENST00000462658 ACYP1P07311 99 aa4.33□□□□□ -1.72
UBE4B-204ENST00000462658 SMIM20Q8N5G0 67 aa4.33□□□□□ -1.72
UBE4B-204ENST00000462658 ANAPC11Q9NYG5 84 aa4.33□□□□□ -1.72
UBE4B-204ENST00000462658 SRRM2Q9UQ35 2752 aaKnown RBP4.33□□□□□ -1.72
UBE4B-204ENST00000462658 FAM240AA0A1B0GVK7 77 aa4.32□□□□□ -1.72
UBE4B-204ENST00000462658 A8MU10 97 aa4.31□□□□□ -1.72
UBE4B-204ENST00000462658 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
UBE4B-204ENST00000462658 Q6JHZ5 121 aa4.31□□□□□ -1.72
UBE4B-204ENST00000462658 SPINK6Q6UWN8 80 aa4.31□□□□□ -1.72
UBE4B-204ENST00000462658 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
UBE4B-204ENST00000462658 IGFL1Q6UW32 110 aa4.3□□□□□ -1.72
UBE4B-204ENST00000462658 A0A0G2JQZ4 141 aa4.29□□□□□ -1.72
UBE4B-204ENST00000462658 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
UBE4B-204ENST00000462658 KRTAP10-4P60372 401 aaPredicted RBP4.29□□□□□ -1.72
UBE4B-204ENST00000462658 LINC00846Q9NV44 126 aa4.29□□□□□ -1.72
UBE4B-204ENST00000462658 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
UBE4B-204ENST00000462658 MOBPQ13875 183 aa4.28□□□□□ -1.72
UBE4B-204ENST00000462658 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
UBE4B-204ENST00000462658 FLG2Q5D862 2391 aaPredicted RBP4.28□□□□□ -1.72
UBE4B-204ENST00000462658 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
UBE4B-204ENST00000462658 A0A1B0GW54 56 aa4.27□□□□□ -1.73
UBE4B-204ENST00000462658 J3KT08 172 aa4.27□□□□□ -1.73
UBE4B-204ENST00000462658 UBL5Q9BZL1 73 aa4.27□□□□□ -1.73
UBE4B-204ENST00000462658 CRYGAP11844 174 aa4.26□□□□□ -1.73
UBE4B-204ENST00000462658 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
UBE4B-204ENST00000462658 Q5VSD8 79 aa4.26□□□□□ -1.73
UBE4B-204ENST00000462658 SSBP3-AS1Q7Z2R9 100 aa4.26□□□□□ -1.73
UBE4B-204ENST00000462658 NREPQ16612 68 aa4.25□□□□□ -1.73
UBE4B-204ENST00000462658 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
UBE4B-204ENST00000462658 LINC00643Q86TS7 51 aa4.25□□□□□ -1.73
UBE4B-204ENST00000462658 A0A087WSZ3 146 aa4.24□□□□□ -1.73
UBE4B-204ENST00000462658 HRCT1Q6UXD1 115 aa4.24□□□□□ -1.73
UBE4B-204ENST00000462658 TRBV7-7A0A0K0K1E9 115 aa4.23□□□□□ -1.73
UBE4B-204ENST00000462658 CCDC179H3BU77 68 aa4.22□□□□□ -1.73
UBE4B-204ENST00000462658 IGKV3D-7A0A0C4DH55 119 aa4.21□□□□□ -1.74
UBE4B-204ENST00000462658 CD164Q04900 197 aa4.21□□□□□ -1.74
UBE4B-204ENST00000462658 IMUPQ9GZP8 106 aa4.21□□□□□ -1.74
UBE4B-204ENST00000462658 ATP5EP2Q5VTU8 51 aa4.2□□□□□ -1.74
UBE4B-204ENST00000462658 BPY2O14599 106 aa4.19□□□□□ -1.74
UBE4B-204ENST00000462658 UQCRQO14949 82 aa4.19□□□□□ -1.74
UBE4B-204ENST00000462658 DMBT1Q9UGM3 2413 aaPredicted RBP4.17□□□□□ -1.74
UBE4B-204ENST00000462658 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
UBE4B-204ENST00000462658 TMEM258P61165 79 aa4.17□□□□□ -1.74
UBE4B-204ENST00000462658 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
UBE4B-204ENST00000462658 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
UBE4B-204ENST00000462658 LINC00472Q9H8W2 130 aa4.17□□□□□ -1.74
UBE4B-204ENST00000462658 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
UBE4B-204ENST00000462658 SPINK1P00995 79 aa4.16□□□□□ -1.74
UBE4B-204ENST00000462658 HIST1H4AP62805 103 aaKnown RBP4.16□□□□□ -1.74
UBE4B-204ENST00000462658 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
UBE4B-204ENST00000462658 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
UBE4B-204ENST00000462658 ASB16-AS1Q495Z4 193 aa4.15□□□□□ -1.75
UBE4B-204ENST00000462658 Q5XG85 94 aa4.15□□□□□ -1.75
UBE4B-204ENST00000462658 Q96NJ1 140 aa4.15□□□□□ -1.75
UBE4B-204ENST00000462658 LIMD2Q9BT23 127 aa4.15□□□□□ -1.75
UBE4B-204ENST00000462658 IGKV4-1P06312 121 aa4.14□□□□□ -1.75
UBE4B-204ENST00000462658 Q8N9L7 120 aa4.14□□□□□ -1.75
UBE4B-204ENST00000462658 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
UBE4B-204ENST00000462658 A0A087WVE0 104 aa4.13□□□□□ -1.75
UBE4B-204ENST00000462658 RPS29P62273 56 aaKnown RBP4.13□□□□□ -1.75
UBE4B-204ENST00000462658 A8MWP4 228 aa4.12□□□□□ -1.75
UBE4B-204ENST00000462658 K7EQZ3 153 aa4.12□□□□□ -1.75
UBE4B-204ENST00000462658 C1orf195Q5TG92 126 aa4.12□□□□□ -1.75
UBE4B-204ENST00000462658 ATOX1O00244 68 aa4.11□□□□□ -1.75
UBE4B-204ENST00000462658 NDUFB1O75438 58 aa4.11□□□□□ -1.75
UBE4B-204ENST00000462658 COX7CP15954 63 aa4.11□□□□□ -1.75
UBE4B-204ENST00000462658 PRR15Q8IV56 129 aa4.11□□□□□ -1.75
UBE4B-204ENST00000462658 FAM236AA0A1B0GUQ0 79 aa4.1□□□□□ -1.75
UBE4B-204ENST00000462658 FAM236BA0A1B0GV22 79 aa4.1□□□□□ -1.75
UBE4B-204ENST00000462658 OXTP01178 125 aa4.1□□□□□ -1.75
UBE4B-204ENST00000462658 LPAP08519 4548 aa4.09□□□□□ -1.75
UBE4B-204ENST00000462658 PRR4Q16378 134 aa4.09□□□□□ -1.75
UBE4B-204ENST00000462658 RNF213Q63HN8 5207 aa4.09□□□□□ -1.75
UBE4B-204ENST00000462658 LRP2P98164 4655 aa4.09□□□□□ -1.76
UBE4B-204ENST00000462658 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
UBE4B-204ENST00000462658 A0A1B0GVX0 72 aa4.08□□□□□ -1.76
UBE4B-204ENST00000462658 MT1HL1P0DM35 61 aa4.08□□□□□ -1.76
UBE4B-204ENST00000462658 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
UBE4B-204ENST00000462658 SEC61GP60059 68 aa4.07□□□□□ -1.76
UBE4B-204ENST00000462658 WFDC13Q8IUB5 93 aa4.06□□□□□ -1.76
UBE4B-204ENST00000462658 C8orf17Q9NRJ1 99 aa4.06□□□□□ -1.76
UBE4B-204ENST00000462658 V9GYY9 64 aa4.06□□□□□ -1.76
UBE4B-204ENST00000462658 MMP24-AS1A0A0U1RRL7 71 aa4.05□□□□□ -1.76
UBE4B-204ENST00000462658 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms