RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 COL6A5A8TX70 2615 aa0.47□□□□□ -2.33
CNOT11-203ENST00000462489 SPINK6Q6UWN8 80 aa0.47□□□□□ -2.33
CNOT11-203ENST00000462489 PRKDCP78527 4128 aaKnown RBP0.47□□□□□ -2.33
CNOT11-203ENST00000462489 OTOGQ6ZRI0 2925 aa0.47□□□□□ -2.33
CNOT11-203ENST00000462489 APC2O95996 2303 aa0.47□□□□□ -2.33
CNOT11-203ENST00000462489 PDZD2O15018 2839 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 FLNCQ14315 2725 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 FAM186AA6NE01 2351 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 H0YGG7 62 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 DEFB135Q30KP9 77 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 LINC01590Q5TEZ4 76 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 DEFB104AQ8WTQ1 72 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 SMR3AQ99954 134 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 TOMM7Q9P0U1 55 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 CCDC168Q8NDH2 2452 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 GCN1Q92616 2671 aaKnown RBP0.46□□□□□ -2.34
CNOT11-203ENST00000462489 FRAS1Q86XX4 4008 aa0.46□□□□□ -2.34
CNOT11-203ENST00000462489 DCHS2Q6V1P9 2916 aa0.45□□□□□ -2.34
CNOT11-203ENST00000462489 UTP20O75691 2785 aaKnown RBP0.45□□□□□ -2.34
CNOT11-203ENST00000462489 M0QY20 66 aa0.45□□□□□ -2.34
CNOT11-203ENST00000462489 ZZEF1O43149 2961 aa0.45□□□□□ -2.34
CNOT11-203ENST00000462489 NCOR2Q9Y618 2525 aa0.45□□□□□ -2.34
CNOT11-203ENST00000462489 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
CNOT11-203ENST00000462489 USP24Q9UPU5 2620 aa0.45□□□□□ -2.34
CNOT11-203ENST00000462489 NBEAL2Q6ZNJ1 2754 aa0.45□□□□□ -2.34
CNOT11-203ENST00000462489 MTORP42345 2549 aa0.44□□□□□ -2.34
CNOT11-203ENST00000462489 ACANP16112 2415 aa0.44□□□□□ -2.34
CNOT11-203ENST00000462489 M0R2T5 61 aa0.44□□□□□ -2.34
CNOT11-203ENST00000462489 SPG11Q96JI7 2443 aa0.44□□□□□ -2.34
CNOT11-203ENST00000462489 CEP250Q9BV73 2442 aa0.44□□□□□ -2.34
CNOT11-203ENST00000462489 KRTAP2-3P0C7H8 128 aa0.43□□□□□ -2.34
CNOT11-203ENST00000462489 PRCDQ00LT1 54 aa0.43□□□□□ -2.34
CNOT11-203ENST00000462489 KRTAP2-4Q9BYR9 128 aa0.43□□□□□ -2.34
CNOT11-203ENST00000462489 KRTAP2-1Q9BYU5 128 aa0.43□□□□□ -2.34
CNOT11-203ENST00000462489 DMXL1Q9Y485 3027 aa0.43□□□□□ -2.34
CNOT11-203ENST00000462489 COL12A1Q99715 3063 aa0.43□□□□□ -2.34
CNOT11-203ENST00000462489 SPTBN4Q9H254 2564 aa0.43□□□□□ -2.34
CNOT11-203ENST00000462489 NBEAQ8NFP9 2946 aa0.42□□□□□ -2.34
CNOT11-203ENST00000462489 TENM2Q9NT68 2774 aa0.42□□□□□ -2.34
CNOT11-203ENST00000462489 FLNBO75369 2602 aaKnown RBP0.42□□□□□ -2.34
CNOT11-203ENST00000462489 MGAQ8IWI9 3026 aa0.42□□□□□ -2.34
CNOT11-203ENST00000462489 CRYBG3Q68DQ2 2970 aa0.42□□□□□ -2.34
CNOT11-203ENST00000462489 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
CNOT11-203ENST00000462489 U3KQA8 63 aa0.42□□□□□ -2.34
CNOT11-203ENST00000462489 AHNAKQ09666 5890 aaKnown RBP0.42□□□□□ -2.34
CNOT11-203ENST00000462489 USP9YO00507 2555 aaPredicted RBP0.42□□□□□ -2.34
CNOT11-203ENST00000462489 NSD1Q96L73 2696 aaPredicted RBP0.41□□□□□ -2.34
CNOT11-203ENST00000462489 FASNP49327 2511 aaKnown RBP0.41□□□□□ -2.34
CNOT11-203ENST00000462489 ANKHD1Q8IWZ3 2542 aaKnown RBP0.41□□□□□ -2.34
CNOT11-203ENST00000462489 M0QZ58 72 aa0.41□□□□□ -2.34
CNOT11-203ENST00000462489 TACC2O95359 2948 aa0.41□□□□□ -2.34
CNOT11-203ENST00000462489 FRYQ5TBA9 3013 aa0.41□□□□□ -2.34
CNOT11-203ENST00000462489 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
CNOT11-203ENST00000462489 DNAH11Q96DT5 4516 aa0.41□□□□□ -2.34
CNOT11-203ENST00000462489 MAST4O15021 2626 aa0.41□□□□□ -2.34
CNOT11-203ENST00000462489 IGSF10Q6WRI0 2623 aa0.41□□□□□ -2.34
CNOT11-203ENST00000462489 USP9XQ93008 2570 aaPredicted RBP0.41□□□□□ -2.34
CNOT11-203ENST00000462489 HUWE1Q7Z6Z7 4374 aaKnown RBP0.41□□□□□ -2.34
CNOT11-203ENST00000462489 TNXBP22105 4242 aa0.4□□□□□ -2.34
CNOT11-203ENST00000462489 CACNA1AO00555 2505 aa0.4□□□□□ -2.34
CNOT11-203ENST00000462489 KALRNO60229 2985 aa0.4□□□□□ -2.34
CNOT11-203ENST00000462489 SACSQ9NZJ4 4579 aa0.4□□□□□ -2.35
CNOT11-203ENST00000462489 ANKRD11Q6UB99 2663 aaPredicted RBP0.4□□□□□ -2.35
CNOT11-203ENST00000462489 PRM1P04553 51 aa0.4□□□□□ -2.35
CNOT11-203ENST00000462489 VPS13DQ5THJ4 4388 aa0.4□□□□□ -2.35
CNOT11-203ENST00000462489 MYO18BQ8IUG5 2567 aa0.4□□□□□ -2.35
CNOT11-203ENST00000462489 SPENQ96T58 3664 aaKnown RBP0.4□□□□□ -2.35
CNOT11-203ENST00000462489 ITPR1Q14643 2758 aa0.4□□□□□ -2.35
CNOT11-203ENST00000462489 KMT2AQ03164 3969 aa0.39□□□□□ -2.35
CNOT11-203ENST00000462489 ITPR3Q14573 2671 aa0.39□□□□□ -2.35
CNOT11-203ENST00000462489 H3BNG1 76 aa0.39□□□□□ -2.35
CNOT11-203ENST00000462489 HIVEP1P15822 2718 aa0.39□□□□□ -2.35
CNOT11-203ENST00000462489 ZFHX4Q86UP3 3567 aa0.39□□□□□ -2.35
CNOT11-203ENST00000462489 TEP1Q99973 2627 aaKnown RBP0.38□□□□□ -2.35
CNOT11-203ENST00000462489 C9orf92A6NGG3 77 aa0.38□□□□□ -2.35
CNOT11-203ENST00000462489 K7EIM0 57 aa0.38□□□□□ -2.35
CNOT11-203ENST00000462489 TNP1P09430 55 aa0.38□□□□□ -2.35
CNOT11-203ENST00000462489 COL7A1Q02388 2944 aa0.38□□□□□ -2.35
CNOT11-203ENST00000462489 CUBNO60494 3623 aa0.38□□□□□ -2.35
CNOT11-203ENST00000462489 ACACBO00763 2458 aa0.38□□□□□ -2.35
CNOT11-203ENST00000462489 SPTBN5Q9NRC6 3674 aaKnown RBP0.37□□□□□ -2.35
CNOT11-203ENST00000462489 DYNC2H1Q8NCM8 4307 aaKnown RBP0.37□□□□□ -2.35
CNOT11-203ENST00000462489 FLNAP21333 2647 aaKnown RBP0.37□□□□□ -2.35
CNOT11-203ENST00000462489 STAB1Q9NY15 2570 aa0.37□□□□□ -2.35
CNOT11-203ENST00000462489 SPART-AS1P0CW21 52 aa0.37□□□□□ -2.35
CNOT11-203ENST00000462489 TLN2Q9Y4G6 2542 aa0.37□□□□□ -2.35
CNOT11-203ENST00000462489 SONP18583 2426 aaKnown RBP0.37□□□□□ -2.35
CNOT11-203ENST00000462489 DNAH9Q9NYC9 4486 aa0.37□□□□□ -2.35
CNOT11-203ENST00000462489 DOPEY1Q5JWR5 2465 aa0.37□□□□□ -2.35
CNOT11-203ENST00000462489 ZANQ9Y493 2812 aa0.37□□□□□ -2.35
CNOT11-203ENST00000462489 DEFB110Q30KQ9 67 aa0.36□□□□□ -2.35
CNOT11-203ENST00000462489 TMEM167AQ8TBQ9 72 aa0.36□□□□□ -2.35
CNOT11-203ENST00000462489 PKD1P98161 4303 aa0.35□□□□□ -2.35
CNOT11-203ENST00000462489 ANK3Q12955 4377 aaKnown RBP0.35□□□□□ -2.35
CNOT11-203ENST00000462489 DNAH3Q8TD57 4116 aa0.35□□□□□ -2.35
CNOT11-203ENST00000462489 SPTAN1Q13813 2472 aaKnown RBP0.35□□□□□ -2.35
CNOT11-203ENST00000462489 CELSR3Q9NYQ7 3312 aa0.35□□□□□ -2.35
CNOT11-203ENST00000462489 DNAH2Q9P225 4427 aa0.35□□□□□ -2.35
CNOT11-203ENST00000462489 ADGRG4Q8IZF6 3080 aa0.35□□□□□ -2.35
CNOT11-203ENST00000462489 CFAP54Q96N23 3096 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms