RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PCOTHQ58A44 107 aa5.21□□□□□ -1.58
PKP4-208ENST00000462335 GTF2H5Q6ZYL4 71 aa5.21□□□□□ -1.58
PKP4-208ENST00000462335 NREPQ16612 68 aa5.2□□□□□ -1.58
PKP4-208ENST00000462335 Q6ZQT0 140 aa5.2□□□□□ -1.58
PKP4-208ENST00000462335 IGHV6-1A0A0B4J1U7 121 aa5.19□□□□□ -1.58
PKP4-208ENST00000462335 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
PKP4-208ENST00000462335 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
PKP4-208ENST00000462335 DSCR10P59022 87 aa5.18□□□□□ -1.58
PKP4-208ENST00000462335 LINC00472Q9H8W2 130 aa5.17□□□□□ -1.58
PKP4-208ENST00000462335 K7EP34 96 aa5.16□□□□□ -1.58
PKP4-208ENST00000462335 C8orf87E5RJ46 101 aa5.15□□□□□ -1.59
PKP4-208ENST00000462335 Q75L30 129 aa5.15□□□□□ -1.59
PKP4-208ENST00000462335 A0A1B0GVX0 72 aa5.14□□□□□ -1.59
PKP4-208ENST00000462335 F8W1H4 67 aa5.11□□□□□ -1.59
PKP4-208ENST00000462335 BPY2O14599 106 aa5.11□□□□□ -1.59
PKP4-208ENST00000462335 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
PKP4-208ENST00000462335 A8MWP4 228 aa5.1□□□□□ -1.59
PKP4-208ENST00000462335 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
PKP4-208ENST00000462335 C20orf166-AS1Q96NR2 134 aa5.1□□□□□ -1.59
PKP4-208ENST00000462335 A8MUU9 505 aa5.09□□□□□ -1.59
PKP4-208ENST00000462335 UBL5Q9BZL1 73 aa5.09□□□□□ -1.59
PKP4-208ENST00000462335 MUC2Q02817 5179 aa5.09□□□□□ -1.59
PKP4-208ENST00000462335 H3BS24 57 aa5.08□□□□□ -1.6
PKP4-208ENST00000462335 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
PKP4-208ENST00000462335 PRR15Q8IV56 129 aa5.06□□□□□ -1.6
PKP4-208ENST00000462335 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
PKP4-208ENST00000462335 C8orf17Q9NRJ1 99 aa5.06□□□□□ -1.6
PKP4-208ENST00000462335 PRO0461Q9UI25 63 aa5.06□□□□□ -1.6
PKP4-208ENST00000462335 IGKV3D-7A0A0C4DH55 119 aa5.05□□□□□ -1.6
PKP4-208ENST00000462335 NDUFS5O43920 106 aa5.05□□□□□ -1.6
PKP4-208ENST00000462335 ETDBQ3ZM63 59 aa5.05□□□□□ -1.6
PKP4-208ENST00000462335 Q6ZVQ6 151 aa5.05□□□□□ -1.6
PKP4-208ENST00000462335 hDV103S1A0JD37 113 aa5.02□□□□□ -1.61
PKP4-208ENST00000462335 KRTAP16-1A8MUX0 517 aa5.02□□□□□ -1.61
PKP4-208ENST00000462335 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
PKP4-208ENST00000462335 FAM236DA0A1B0GTK5 79 aa5.01□□□□□ -1.61
PKP4-208ENST00000462335 FAM236CP0DP71 79 aa5.01□□□□□ -1.61
PKP4-208ENST00000462335 LINC00846Q9NV44 126 aa5.01□□□□□ -1.61
PKP4-208ENST00000462335 K7EQZ3 153 aa5□□□□□ -1.61
PKP4-208ENST00000462335 M0R2T5 61 aa5□□□□□ -1.61
PKP4-208ENST00000462335 TMEM254Q8TBM7 123 aa5□□□□□ -1.61
PKP4-208ENST00000462335 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
PKP4-208ENST00000462335 MRPL34Q9BQ48 92 aaKnown RBP5□□□□□ -1.61
PKP4-208ENST00000462335 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
PKP4-208ENST00000462335 ACYP1P07311 99 aa4.98□□□□□ -1.61
PKP4-208ENST00000462335 CASC2Q6XLA1 102 aa4.98□□□□□ -1.61
PKP4-208ENST00000462335 WFDC13Q8IUB5 93 aa4.98□□□□□ -1.61
PKP4-208ENST00000462335 Q8N9P0 234 aaPredicted RBP4.98□□□□□ -1.61
PKP4-208ENST00000462335 Q8N9L7 120 aa4.97□□□□□ -1.61
PKP4-208ENST00000462335 MMP24-AS1A0A0U1RRL7 71 aa4.96□□□□□ -1.62
PKP4-208ENST00000462335 A0A1B0GV90 55 aa4.95□□□□□ -1.62
PKP4-208ENST00000462335 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
PKP4-208ENST00000462335 CXCL6P80162 114 aa4.94□□□□□ -1.62
PKP4-208ENST00000462335 HCG22E2RYF7 251 aa4.93□□□□□ -1.62
PKP4-208ENST00000462335 SPINK7P58062 85 aa4.93□□□□□ -1.62
PKP4-208ENST00000462335 J3QR89 54 aa4.91□□□□□ -1.62
PKP4-208ENST00000462335 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
PKP4-208ENST00000462335 FAM240AA0A1B0GVK7 77 aa4.89□□□□□ -1.63
PKP4-208ENST00000462335 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
PKP4-208ENST00000462335 HIST1H4AP62805 103 aaKnown RBP4.89□□□□□ -1.63
PKP4-208ENST00000462335 MT1HP80294 61 aa4.88□□□□□ -1.63
PKP4-208ENST00000462335 ATP5EP2Q5VTU8 51 aa4.88□□□□□ -1.63
PKP4-208ENST00000462335 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
PKP4-208ENST00000462335 TP53AIP1Q9HCN2 124 aa4.87□□□□□ -1.63
PKP4-208ENST00000462335 HRES1P13985 223 aa4.85□□□□□ -1.63
PKP4-208ENST00000462335 C7orf65Q6ZTY9 151 aa4.85□□□□□ -1.63
PKP4-208ENST00000462335 LINC00643Q86TS7 51 aa4.85□□□□□ -1.63
PKP4-208ENST00000462335 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
PKP4-208ENST00000462335 Q5W150 140 aa4.82□□□□□ -1.64
PKP4-208ENST00000462335 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
PKP4-208ENST00000462335 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
PKP4-208ENST00000462335 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
PKP4-208ENST00000462335 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
PKP4-208ENST00000462335 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
PKP4-208ENST00000462335 H1FX-AS1Q4G0G2 97 aa4.76□□□□□ -1.65
PKP4-208ENST00000462335 TRAV22A0A0B4J277 110 aa4.75□□□□□ -1.65
PKP4-208ENST00000462335 K7ERU9 68 aa4.75□□□□□ -1.65
PKP4-208ENST00000462335 UQCRQO14949 82 aa4.75□□□□□ -1.65
PKP4-208ENST00000462335 SCGB1A1P11684 91 aa4.75□□□□□ -1.65
PKP4-208ENST00000462335 C4orf26Q17RF5 130 aa4.75□□□□□ -1.65
PKP4-208ENST00000462335 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
PKP4-208ENST00000462335 ATOX1O00244 68 aa4.74□□□□□ -1.65
PKP4-208ENST00000462335 A0A087WVE0 104 aa4.73□□□□□ -1.65
PKP4-208ENST00000462335 LOC101927531A0A1B0GV80 90 aa4.72□□□□□ -1.65
PKP4-208ENST00000462335 H0Y9P7 68 aa4.71□□□□□ -1.66
PKP4-208ENST00000462335 MP68P56378 58 aa4.71□□□□□ -1.66
PKP4-208ENST00000462335 C1orf64Q8NEQ6 169 aa4.7□□□□□ -1.66
PKP4-208ENST00000462335 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
PKP4-208ENST00000462335 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
PKP4-208ENST00000462335 LINC00208Q96KT6 92 aa4.66□□□□□ -1.66
PKP4-208ENST00000462335 C5orf47Q569G3 176 aa4.65□□□□□ -1.67
PKP4-208ENST00000462335 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
PKP4-208ENST00000462335 S4R3F8 94 aa4.65□□□□□ -1.67
PKP4-208ENST00000462335 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
PKP4-208ENST00000462335 IMUPQ9GZP8 106 aa4.64□□□□□ -1.67
PKP4-208ENST00000462335 CSAG1Q6PB30 78 aa4.62□□□□□ -1.67
PKP4-208ENST00000462335 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
PKP4-208ENST00000462335 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
PKP4-208ENST00000462335 H3BPC8 53 aa4.6□□□□□ -1.67
PKP4-208ENST00000462335 MT-ATP8P03928 68 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms