RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SMIM6P0DI80 62 aa5.23□□□□□ -1.57
SF3A3-204ENST00000462258 BAALC-AS2P0C853 105 aa5.22□□□□□ -1.57
SF3A3-204ENST00000462258 ATXN8Q156A1 80 aa5.22□□□□□ -1.57
SF3A3-204ENST00000462258 NOTCH2NLQ7Z3S9 236 aa5.22□□□□□ -1.57
SF3A3-204ENST00000462258 NAA38Q9BRA0 125 aaKnown RBP5.22□□□□□ -1.57
SF3A3-204ENST00000462258 TRBV20-1A0A075B6N2 111 aa5.21□□□□□ -1.58
SF3A3-204ENST00000462258 C9JAW5 83 aa5.21□□□□□ -1.58
SF3A3-204ENST00000462258 A0A1B0GVX0 72 aa5.2□□□□□ -1.58
SF3A3-204ENST00000462258 C8orf87E5RJ46 101 aa5.2□□□□□ -1.58
SF3A3-204ENST00000462258 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
SF3A3-204ENST00000462258 JMJD7-PLA2G4BH0Y9G9 81 aa5.18□□□□□ -1.58
SF3A3-204ENST00000462258 LYRM7Q5U5X0 104 aa5.18□□□□□ -1.58
SF3A3-204ENST00000462258 TSTD3H0UI37 97 aa5.17□□□□□ -1.58
SF3A3-204ENST00000462258 J3KT08 172 aa5.17□□□□□ -1.58
SF3A3-204ENST00000462258 Q6ZQT0 140 aa5.17□□□□□ -1.58
SF3A3-204ENST00000462258 CRCT1Q9UGL9 99 aa5.17□□□□□ -1.58
SF3A3-204ENST00000462258 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
SF3A3-204ENST00000462258 LOC110117498A0A087WWA1 95 aa5.15□□□□□ -1.59
SF3A3-204ENST00000462258 FAM236DA0A1B0GTK5 79 aa5.15□□□□□ -1.59
SF3A3-204ENST00000462258 FAM236CP0DP71 79 aa5.15□□□□□ -1.59
SF3A3-204ENST00000462258 BATFQ16520 125 aa5.15□□□□□ -1.59
SF3A3-204ENST00000462258 C14orf132Q9NPU4 83 aa5.14□□□□□ -1.59
SF3A3-204ENST00000462258 A0A1B0GW54 56 aa5.13□□□□□ -1.59
SF3A3-204ENST00000462258 NDUFB1O75438 58 aa5.13□□□□□ -1.59
SF3A3-204ENST00000462258 HRES1P13985 223 aa5.13□□□□□ -1.59
SF3A3-204ENST00000462258 PDE6GP18545 87 aa5.13□□□□□ -1.59
SF3A3-204ENST00000462258 RBM12B-AS1Q9P1G2 102 aa5.12□□□□□ -1.59
SF3A3-204ENST00000462258 A8MWP4 228 aa5.11□□□□□ -1.59
SF3A3-204ENST00000462258 MPLKIPQ8TAP9 179 aa5.11□□□□□ -1.59
SF3A3-204ENST00000462258 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
SF3A3-204ENST00000462258 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
SF3A3-204ENST00000462258 C8orf17Q9NRJ1 99 aa5.1□□□□□ -1.59
SF3A3-204ENST00000462258 IGKV3D-7A0A0C4DH55 119 aa5.09□□□□□ -1.59
SF3A3-204ENST00000462258 H3BT86 120 aa5.08□□□□□ -1.6
SF3A3-204ENST00000462258 Q8N9P0 234 aaPredicted RBP5.08□□□□□ -1.6
SF3A3-204ENST00000462258 LOC105371267A0A1B0GV96 52 aa5.07□□□□□ -1.6
SF3A3-204ENST00000462258 A0A1W2PPM0 123 aa5.07□□□□□ -1.6
SF3A3-204ENST00000462258 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
SF3A3-204ENST00000462258 TAX1BP3O14907 124 aa5.07□□□□□ -1.6
SF3A3-204ENST00000462258 NREPQ16612 68 aa5.07□□□□□ -1.6
SF3A3-204ENST00000462258 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
SF3A3-204ENST00000462258 MTURNQ8N3F0 131 aa5.07□□□□□ -1.6
SF3A3-204ENST00000462258 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
SF3A3-204ENST00000462258 SPINK7P58062 85 aa5.05□□□□□ -1.6
SF3A3-204ENST00000462258 Q6ZVQ6 151 aa5.05□□□□□ -1.6
SF3A3-204ENST00000462258 PRR15Q8IV56 129 aa5.05□□□□□ -1.6
SF3A3-204ENST00000462258 MMP24-AS1A0A0U1RRL7 71 aa5.04□□□□□ -1.6
SF3A3-204ENST00000462258 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
SF3A3-204ENST00000462258 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
SF3A3-204ENST00000462258 USH2AO75445 5202 aa5.04□□□□□ -1.6
SF3A3-204ENST00000462258 K7EQZ3 153 aa5.02□□□□□ -1.61
SF3A3-204ENST00000462258 MT2AP02795 61 aa5.02□□□□□ -1.61
SF3A3-204ENST00000462258 WFDC13Q8IUB5 93 aa5.02□□□□□ -1.61
SF3A3-204ENST00000462258 TMEM254Q8TBM7 123 aa5.02□□□□□ -1.61
SF3A3-204ENST00000462258 MRPL34Q9BQ48 92 aaKnown RBP5.02□□□□□ -1.61
SF3A3-204ENST00000462258 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
SF3A3-204ENST00000462258 SPCS1Q9Y6A9 102 aa5.01□□□□□ -1.61
SF3A3-204ENST00000462258 hDV103S1A0JD37 113 aa4.99□□□□□ -1.61
SF3A3-204ENST00000462258 BPY2O14599 106 aa4.99□□□□□ -1.61
SF3A3-204ENST00000462258 MT1FP04733 61 aa4.99□□□□□ -1.61
SF3A3-204ENST00000462258 NDUFS5O43920 106 aa4.98□□□□□ -1.61
SF3A3-204ENST00000462258 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
SF3A3-204ENST00000462258 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
SF3A3-204ENST00000462258 COL5A1-AS1Q5SY13 56 aa4.94□□□□□ -1.62
SF3A3-204ENST00000462258 Q8N9L7 120 aa4.94□□□□□ -1.62
SF3A3-204ENST00000462258 K7EP34 96 aa4.92□□□□□ -1.62
SF3A3-204ENST00000462258 CASC2Q6XLA1 102 aa4.92□□□□□ -1.62
SF3A3-204ENST00000462258 IGKV2D-30A0A075B6S6 120 aa4.91□□□□□ -1.62
SF3A3-204ENST00000462258 IGKV2-30P06310 120 aa4.91□□□□□ -1.62
SF3A3-204ENST00000462258 C7orf65Q6ZTY9 151 aa4.91□□□□□ -1.62
SF3A3-204ENST00000462258 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
SF3A3-204ENST00000462258 PRO0461Q9UI25 63 aa4.91□□□□□ -1.62
SF3A3-204ENST00000462258 HCG22E2RYF7 251 aa4.9□□□□□ -1.63
SF3A3-204ENST00000462258 UBL5Q9BZL1 73 aa4.9□□□□□ -1.63
SF3A3-204ENST00000462258 Q5W150 140 aa4.89□□□□□ -1.63
SF3A3-204ENST00000462258 LINC00846Q9NV44 126 aa4.89□□□□□ -1.63
SF3A3-204ENST00000462258 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
SF3A3-204ENST00000462258 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
SF3A3-204ENST00000462258 CXCL6P80162 114 aa4.86□□□□□ -1.63
SF3A3-204ENST00000462258 GTF2H5Q6ZYL4 71 aa4.85□□□□□ -1.63
SF3A3-204ENST00000462258 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
SF3A3-204ENST00000462258 PCP4L1A6NKN8 68 aa4.81□□□□□ -1.64
SF3A3-204ENST00000462258 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
SF3A3-204ENST00000462258 F8W1H4 67 aa4.8□□□□□ -1.64
SF3A3-204ENST00000462258 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
SF3A3-204ENST00000462258 ETDBQ3ZM63 59 aa4.79□□□□□ -1.64
SF3A3-204ENST00000462258 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
SF3A3-204ENST00000462258 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
SF3A3-204ENST00000462258 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
SF3A3-204ENST00000462258 TP53AIP1Q9HCN2 124 aa4.76□□□□□ -1.65
SF3A3-204ENST00000462258 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
SF3A3-204ENST00000462258 C5orf47Q569G3 176 aa4.73□□□□□ -1.65
SF3A3-204ENST00000462258 S4R3F8 94 aa4.73□□□□□ -1.65
SF3A3-204ENST00000462258 C1orf64Q8NEQ6 169 aa4.72□□□□□ -1.65
SF3A3-204ENST00000462258 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
SF3A3-204ENST00000462258 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
SF3A3-204ENST00000462258 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
SF3A3-204ENST00000462258 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
SF3A3-204ENST00000462258 ACYP1P07311 99 aa4.69□□□□□ -1.66
SF3A3-204ENST00000462258 LCA10Q71F78 164 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms