RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	TRAC	P01848	142 aa		4.48	□□□□□ -1.69
ITSN1-222	ENST00000462212		A0A087WSZ3	146 aa		4.47	□□□□□ -1.69
ITSN1-222	ENST00000462212	ETDB	Q3ZM63	59 aa		4.46	□□□□□ -1.7
ITSN1-222	ENST00000462212		Q96NJ1	140 aa		4.46	□□□□□ -1.7
ITSN1-222	ENST00000462212	TRBV7-4	A0A0J9YYF1	115 aa		4.45	□□□□□ -1.7
ITSN1-222	ENST00000462212	SCGB1C2	P0DMR2	95 aa		4.45	□□□□□ -1.7
ITSN1-222	ENST00000462212	KRTAP19-2	Q3LHN2	52 aa		4.45	□□□□□ -1.7
ITSN1-222	ENST00000462212	SMIM20	Q8N5G0	67 aa		4.45	□□□□□ -1.7
ITSN1-222	ENST00000462212	ANKRD29	Q8N6D5	301 aa		4.45	□□□□□ -1.7
ITSN1-222	ENST00000462212	PRO0461	Q9UI25	63 aa		4.45	□□□□□ -1.7
ITSN1-222	ENST00000462212	KRTAP4-8	A0A0G2JLE6	195 aa		4.44	□□□□□ -1.7
ITSN1-222	ENST00000462212	OBSCN-AS1	Q96MR7	158 aa		4.44	□□□□□ -1.7
ITSN1-222	ENST00000462212	TRBV20-1	A0A075B6N2	111 aa		4.43	□□□□□ -1.7
ITSN1-222	ENST00000462212	MT-ATP8	P03928	68 aa		4.43	□□□□□ -1.7
ITSN1-222	ENST00000462212		Q75L30	129 aa		4.43	□□□□□ -1.7
ITSN1-222	ENST00000462212	NAA38	Q9BRA0	125 aa	Known RBP	4.42	□□□□□ -1.7
ITSN1-222	ENST00000462212	CCK	P06307	115 aa		4.41	□□□□□ -1.7
ITSN1-222	ENST00000462212	BAALC-AS2	P0C853	105 aa		4.41	□□□□□ -1.7
ITSN1-222	ENST00000462212	RBM3	P98179	157 aa	Known RBP	4.4	□□□□□ -1.71
ITSN1-222	ENST00000462212	ATXN8	Q156A1	80 aa		4.4	□□□□□ -1.71
ITSN1-222	ENST00000462212	C20orf166-AS1	Q96NR2	134 aa		4.4	□□□□□ -1.71
ITSN1-222	ENST00000462212	LINC00472	Q9H8W2	130 aa		4.4	□□□□□ -1.71
ITSN1-222	ENST00000462212		A8MUU9	505 aa		4.39	□□□□□ -1.71
ITSN1-222	ENST00000462212	CRCT1	Q9UGL9	99 aa		4.39	□□□□□ -1.71
ITSN1-222	ENST00000462212		J3KT08	172 aa		4.38	□□□□□ -1.71
ITSN1-222	ENST00000462212	IGKV4-1	P06312	121 aa		4.38	□□□□□ -1.71
ITSN1-222	ENST00000462212	RPS28	P62857	69 aa	Known RBP	4.38	□□□□□ -1.71
ITSN1-222	ENST00000462212	DSCR8	Q96T75	97 aa		4.38	□□□□□ -1.71
ITSN1-222	ENST00000462212	CCDC179	H3BU77	68 aa		4.37	□□□□□ -1.71
ITSN1-222	ENST00000462212	DSCR10	P59022	87 aa		4.37	□□□□□ -1.71
ITSN1-222	ENST00000462212	ATP11AUN	Q6ZP68	121 aa		4.37	□□□□□ -1.71
ITSN1-222	ENST00000462212	IMUP	Q9GZP8	106 aa		4.37	□□□□□ -1.71
ITSN1-222	ENST00000462212	KRTAP16-1	A8MUX0	517 aa		4.36	□□□□□ -1.71
ITSN1-222	ENST00000462212		C9JAW5	83 aa		4.36	□□□□□ -1.71
ITSN1-222	ENST00000462212	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.36	□□□□□ -1.71
ITSN1-222	ENST00000462212	MT1H	P80294	61 aa		4.36	□□□□□ -1.71
ITSN1-222	ENST00000462212	LOC110117498	A0A087WWA1	95 aa		4.35	□□□□□ -1.71
ITSN1-222	ENST00000462212	FAM240A	A0A1B0GVK7	77 aa		4.35	□□□□□ -1.71
ITSN1-222	ENST00000462212	LINC00313	P59037	77 aa		4.35	□□□□□ -1.71
ITSN1-222	ENST00000462212	DEFB116	Q30KQ4	102 aa		4.35	□□□□□ -1.71
ITSN1-222	ENST00000462212	FLG	P20930	4061 aa	Predicted RBP	4.35	□□□□□ -1.71
ITSN1-222	ENST00000462212		A0A1B0GW54	56 aa		4.34	□□□□□ -1.71
ITSN1-222	ENST00000462212		Q6ZQT0	140 aa		4.34	□□□□□ -1.71
ITSN1-222	ENST00000462212	NOTCH2NL	Q7Z3S9	236 aa		4.34	□□□□□ -1.71
ITSN1-222	ENST00000462212	UQCRQ	O14949	82 aa		4.33	□□□□□ -1.72
ITSN1-222	ENST00000462212	ACYP1	P07311	99 aa		4.33	□□□□□ -1.72
ITSN1-222	ENST00000462212	PDE6G	P18545	87 aa		4.33	□□□□□ -1.72
ITSN1-222	ENST00000462212		A0A1B0GVX0	72 aa		4.32	□□□□□ -1.72
ITSN1-222	ENST00000462212	IGHV6-1	A0A0B4J1U7	121 aa		4.31	□□□□□ -1.72
ITSN1-222	ENST00000462212	C8orf87	E5RJ46	101 aa		4.31	□□□□□ -1.72
ITSN1-222	ENST00000462212	C14orf132	Q9NPU4	83 aa		4.31	□□□□□ -1.72
ITSN1-222	ENST00000462212		H3BT86	120 aa		4.3	□□□□□ -1.72
ITSN1-222	ENST00000462212	LCE1D	Q5T752	114 aa		4.3	□□□□□ -1.72
ITSN1-222	ENST00000462212	COX6B2	Q6YFQ2	88 aa		4.3	□□□□□ -1.72
ITSN1-222	ENST00000462212	TMEM258	P61165	79 aa		4.28	□□□□□ -1.72
ITSN1-222	ENST00000462212	KRTAP4-7	Q9BYR0	210 aa		4.28	□□□□□ -1.72
ITSN1-222	ENST00000462212		A8MWP4	228 aa		4.27	□□□□□ -1.73
ITSN1-222	ENST00000462212	KRTAP10-6	P60371	365 aa	Predicted RBP	4.27	□□□□□ -1.73
ITSN1-222	ENST00000462212	ATOX1	O00244	68 aa		4.26	□□□□□ -1.73
ITSN1-222	ENST00000462212	NDUFB1	O75438	58 aa		4.26	□□□□□ -1.73
ITSN1-222	ENST00000462212	COX7C	P15954	63 aa		4.26	□□□□□ -1.73
ITSN1-222	ENST00000462212	IGKV3D-7	A0A0C4DH55	119 aa		4.25	□□□□□ -1.73
ITSN1-222	ENST00000462212	LINC00643	Q86TS7	51 aa		4.25	□□□□□ -1.73
ITSN1-222	ENST00000462212		Q8N9P0	234 aa	Predicted RBP	4.25	□□□□□ -1.73
ITSN1-222	ENST00000462212	FAM236A	A0A1B0GUQ0	79 aa		4.24	□□□□□ -1.73
ITSN1-222	ENST00000462212	FAM236B	A0A1B0GV22	79 aa		4.24	□□□□□ -1.73
ITSN1-222	ENST00000462212		M0R2T5	61 aa		4.24	□□□□□ -1.73
ITSN1-222	ENST00000462212	NREP	Q16612	68 aa		4.24	□□□□□ -1.73
ITSN1-222	ENST00000462212	MPLKIP	Q8TAP9	179 aa		4.24	□□□□□ -1.73
ITSN1-222	ENST00000462212	C8orf17	Q9NRJ1	99 aa		4.24	□□□□□ -1.73
ITSN1-222	ENST00000462212	HRES1	P13985	223 aa		4.23	□□□□□ -1.73
ITSN1-222	ENST00000462212	PRR15	Q8IV56	129 aa		4.23	□□□□□ -1.73
ITSN1-222	ENST00000462212	LCE4A	Q5TA78	99 aa		4.22	□□□□□ -1.73
ITSN1-222	ENST00000462212	ZCCHC13	Q8WW36	166 aa	Known RBP	4.22	□□□□□ -1.73
ITSN1-222	ENST00000462212	PRO0628	Q9UI54	55 aa		4.22	□□□□□ -1.73
ITSN1-222	ENST00000462212		Q6ZVQ6	151 aa		4.21	□□□□□ -1.74
ITSN1-222	ENST00000462212	FSIP2	Q5CZC0	6907 aa		4.21	□□□□□ -1.74
ITSN1-222	ENST00000462212	MMP24-AS1	A0A0U1RRL7	71 aa		4.2	□□□□□ -1.74
ITSN1-222	ENST00000462212	KRTAP9-7	A8MTY7	169 aa		4.2	□□□□□ -1.74
ITSN1-222	ENST00000462212	HIST1H4A	P62805	103 aa	Known RBP	4.19	□□□□□ -1.74
ITSN1-222	ENST00000462212	TMEM254	Q8TBM7	123 aa		4.19	□□□□□ -1.74
ITSN1-222	ENST00000462212	KRTAP4-9	Q9BYQ8	210 aa		4.19	□□□□□ -1.74
ITSN1-222	ENST00000462212		K7EQZ3	153 aa		4.18	□□□□□ -1.74
ITSN1-222	ENST00000462212	SERP2	Q8N6R1	65 aa		4.18	□□□□□ -1.74
ITSN1-222	ENST00000462212	RBM12B-AS1	Q9P1G2	102 aa		4.18	□□□□□ -1.74
ITSN1-222	ENST00000462212	BPY2	O14599	106 aa		4.17	□□□□□ -1.74
ITSN1-222	ENST00000462212	SPINK7	P58062	85 aa		4.17	□□□□□ -1.74
ITSN1-222	ENST00000462212	MRPL34	Q9BQ48	92 aa	Known RBP	4.17	□□□□□ -1.74
ITSN1-222	ENST00000462212	FAM236D	A0A1B0GTK5	79 aa		4.16	□□□□□ -1.74
ITSN1-222	ENST00000462212	hDV103S1	A0JD37	113 aa		4.16	□□□□□ -1.74
ITSN1-222	ENST00000462212	FAM236C	P0DP71	79 aa		4.16	□□□□□ -1.74
ITSN1-222	ENST00000462212	KRTAP9-8	Q9BYQ0	159 aa		4.15	□□□□□ -1.75
ITSN1-222	ENST00000462212	SERP1	Q9Y6X1	66 aa		4.15	□□□□□ -1.75
ITSN1-222	ENST00000462212		V9GYY9	64 aa		4.15	□□□□□ -1.75
ITSN1-222	ENST00000462212	SEC61G	P60059	68 aa		4.14	□□□□□ -1.75
ITSN1-222	ENST00000462212	ATP5EP2	Q5VTU8	51 aa		4.14	□□□□□ -1.75
ITSN1-222	ENST00000462212	LINC00846	Q9NV44	126 aa		4.14	□□□□□ -1.75
ITSN1-222	ENST00000462212	ATP5E	P56381	51 aa	Predicted RBP	4.13	□□□□□ -1.75
ITSN1-222	ENST00000462212	SMIM26	A0A096LP01	95 aa		4.12	□□□□□ -1.75
ITSN1-222	ENST00000462212	C4orf26	Q17RF5	130 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms