RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FLNAP21333 2647 aaKnown RBP0.56□□□□□ -2.32
HDAC6-212ENST00000461608 KMT2CQ8NEZ4 4911 aaKnown RBP0.56□□□□□ -2.32
HDAC6-212ENST00000461608 TLN2Q9Y4G6 2542 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 STATHP02808 62 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 NREPQ16612 68 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 ATP5EP2Q5VTU8 51 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 S100ZQ8WXG8 99 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 FAM103A1Q9BTL3 118 aaKnown RBP0.56□□□□□ -2.32
HDAC6-212ENST00000461608 TP53AIP1Q9HCN2 124 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 LRBAP50851 2863 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 EPPK1P58107 5090 aaKnown RBP0.56□□□□□ -2.32
HDAC6-212ENST00000461608 NSD1Q96L73 2696 aaPredicted RBP0.56□□□□□ -2.32
HDAC6-212ENST00000461608 CENPEQ02224 2701 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 CUBNO60494 3623 aa0.56□□□□□ -2.32
HDAC6-212ENST00000461608 WNK2Q9Y3S1 2297 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 DEFB108AA8MXU0 73 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 I3L2K1 104 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 COX8AP10176 69 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 COX7BP24311 80 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 DEFB110Q30KQ9 67 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 PRO0255Q9UI72 69 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 PLCE1Q9P212 2302 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 WNK1Q9H4A3 2382 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 VPS13CQ709C8 3753 aa0.55□□□□□ -2.32
HDAC6-212ENST00000461608 NIPBLQ6KC79 2804 aaeCLIP0.55□□□□□ -2.32
HDAC6-212ENST00000461608 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 NF1P21359 2839 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 RYR1P21817 5038 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 MGAM2Q2M2H8 2515 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 H0YGG7 62 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 NDUFB1O75438 58 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 COX6A2Q02221 97 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 ATXN8Q156A1 80 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 NCBP2-AS2Q69YL0 99 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 STAB1Q9NY15 2570 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 HERC2O95714 4834 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 NBEAL1Q6ZS30 2694 aa0.54□□□□□ -2.32
HDAC6-212ENST00000461608 SVEP1Q4LDE5 3571 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 TACC2O95359 2948 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 ABCA13Q86UQ4 5058 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 A0A087WWC5 75 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 SFTA3P0C7M3 94 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 C3orf79P0CE67 100 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 PIGYQ3MUY2 71 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 ENHOQ6UWT2 76 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 TRRAPQ9Y4A5 3859 aa0.53□□□□□ -2.32
HDAC6-212ENST00000461608 PRRC2CQ9Y520 2896 aaKnown RBP0.53□□□□□ -2.32
HDAC6-212ENST00000461608 MXRA5Q9NR99 2828 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 HRNRQ86YZ3 2850 aaPredicted RBP0.52□□□□□ -2.33
HDAC6-212ENST00000461608 KIAA1109Q2LD37 5005 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 LCE6AA0A183 80 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 I3L3M4 83 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 K7EQZ3 153 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 CCL22O00626 93 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 Q8IZM0 81 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 CNFNQ9BYD5 112 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 UBR4Q5T4S7 5183 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 ZANQ9Y493 2812 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 ANK2Q01484 3957 aa0.52□□□□□ -2.33
HDAC6-212ENST00000461608 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
HDAC6-212ENST00000461608 CPSF4LA6NMK7 179 aaKnown RBP0.51□□□□□ -2.33
HDAC6-212ENST00000461608 NDUFA4O00483 81 aa0.51□□□□□ -2.33
HDAC6-212ENST00000461608 TGP01266 2768 aa0.51□□□□□ -2.33
HDAC6-212ENST00000461608 MAP1AP78559 2803 aaPredicted RBP0.51□□□□□ -2.33
HDAC6-212ENST00000461608 ANK3Q12955 4377 aaKnown RBP0.51□□□□□ -2.33
HDAC6-212ENST00000461608 DEFB108BQ8NET1 73 aa0.51□□□□□ -2.33
HDAC6-212ENST00000461608 APLNQ9ULZ1 77 aa0.51□□□□□ -2.33
HDAC6-212ENST00000461608 STARD9Q9P2P6 4700 aa0.51□□□□□ -2.33
HDAC6-212ENST00000461608 PRKDCP78527 4128 aaKnown RBP0.5□□□□□ -2.33
HDAC6-212ENST00000461608 LINC01549A6NIU2 74 aa0.5□□□□□ -2.33
HDAC6-212ENST00000461608 LYNX1G3V0Z9 82 aa0.5□□□□□ -2.33
HDAC6-212ENST00000461608 MRPL33O75394 65 aaKnown RBP0.5□□□□□ -2.33
HDAC6-212ENST00000461608 LELP1Q5T871 98 aa0.5□□□□□ -2.33
HDAC6-212ENST00000461608 USMG5Q96IX5 58 aa0.5□□□□□ -2.33
HDAC6-212ENST00000461608 MRPL34Q9BQ48 92 aaKnown RBP0.5□□□□□ -2.33
HDAC6-212ENST00000461608 FXYD6Q9H0Q3 95 aa0.5□□□□□ -2.33
HDAC6-212ENST00000461608 TNCP24821 2201 aa0.5□□□□□ -2.33
HDAC6-212ENST00000461608 HERC1Q15751 4861 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 TENM2Q9NT68 2774 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 H3BUX3 64 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 SPRR1BP22528 89 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 SPRR1AP35321 89 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 RPL38P63173 70 aaKnown RBP0.49□□□□□ -2.33
HDAC6-212ENST00000461608 KLK9Q2XQG4 91 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 VWFP04275 2813 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 NBEAL2Q6ZNJ1 2754 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 TENM3Q9P273 2699 aa0.49□□□□□ -2.33
HDAC6-212ENST00000461608 CMYA5Q8N3K9 4069 aa0.48□□□□□ -2.33
HDAC6-212ENST00000461608 COL7A1Q02388 2944 aa0.48□□□□□ -2.33
HDAC6-212ENST00000461608 MEGF8Q7Z7M0 2845 aa0.48□□□□□ -2.33
HDAC6-212ENST00000461608 K7EMI3 77 aa0.48□□□□□ -2.33
HDAC6-212ENST00000461608 NDUFA3O95167 84 aa0.48□□□□□ -2.33
HDAC6-212ENST00000461608 FCER1GP30273 86 aa0.48□□□□□ -2.33
HDAC6-212ENST00000461608 LYSTQ99698 3801 aa0.48□□□□□ -2.33
HDAC6-212ENST00000461608 KAAG1Q9UBP8 84 aa0.48□□□□□ -2.33
HDAC6-212ENST00000461608 PLECQ15149 4684 aaKnown RBP0.47□□□□□ -2.33
HDAC6-212ENST00000461608 CSMD3Q7Z407 3707 aa0.47□□□□□ -2.33
HDAC6-212ENST00000461608 SACSQ9NZJ4 4579 aa0.47□□□□□ -2.33
HDAC6-212ENST00000461608 M0R1W7 72 aa0.47□□□□□ -2.33
HDAC6-212ENST00000461608 H1FX-AS1Q4G0G2 97 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms