RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 UBE2AP49459 152 aa6.71□□□□□ -1.34
APTX-209ENST00000460940 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.34
APTX-209ENST00000460940 KCNQ1DNQ9H478 68 aa6.71□□□□□ -1.34
APTX-209ENST00000460940 KRTAP13-1Q8IUC0 172 aa6.7□□□□□ -1.34
APTX-209ENST00000460940 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
APTX-209ENST00000460940 TRAV22A0A0B4J277 110 aa6.69□□□□□ -1.34
APTX-209ENST00000460940 ZNF73O43830 326 aaPredicted RBP6.68□□□□□ -1.34
APTX-209ENST00000460940 SPRR1AP35321 89 aa6.68□□□□□ -1.34
APTX-209ENST00000460940 A0A1B0GW54 56 aa6.68□□□□□ -1.34
APTX-209ENST00000460940 ELOF1P60002 83 aaKnown RBP6.67□□□□□ -1.34
APTX-209ENST00000460940 PRLHP81277 87 aa6.67□□□□□ -1.34
APTX-209ENST00000460940 ETDCA0A1B0GVM5 59 aa6.66□□□□□ -1.34
APTX-209ENST00000460940 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
APTX-209ENST00000460940 Q8N9L7 120 aa6.66□□□□□ -1.34
APTX-209ENST00000460940 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
APTX-209ENST00000460940 KRTAP1-4P0C5Y4 121 aa6.65□□□□□ -1.34
APTX-209ENST00000460940 PSPHP1O15172 72 aa6.64□□□□□ -1.35
APTX-209ENST00000460940 TNXBP22105 4242 aa6.63□□□□□ -1.35
APTX-209ENST00000460940 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
APTX-209ENST00000460940 LCA10Q71F78 164 aa6.63□□□□□ -1.35
APTX-209ENST00000460940 SMIM29Q86T20 159 aa6.63□□□□□ -1.35
APTX-209ENST00000460940 NDUFB1O75438 58 aa6.62□□□□□ -1.35
APTX-209ENST00000460940 Q5VV11 94 aa6.62□□□□□ -1.35
APTX-209ENST00000460940 Q6ZRX8 168 aa6.62□□□□□ -1.35
APTX-209ENST00000460940 ZNF706Q9Y5V0 76 aaPredicted RBP6.62□□□□□ -1.35
APTX-209ENST00000460940 HERC1Q15751 4861 aa6.62□□□□□ -1.35
APTX-209ENST00000460940 A8MUN3 132 aa6.6□□□□□ -1.35
APTX-209ENST00000460940 C7orf65Q6ZTY9 151 aa6.6□□□□□ -1.35
APTX-209ENST00000460940 LCE2BO14633 110 aa6.59□□□□□ -1.35
APTX-209ENST00000460940 LIMD2Q9BT23 127 aa6.59□□□□□ -1.35
APTX-209ENST00000460940 A6NN06 94 aa6.58□□□□□ -1.36
APTX-209ENST00000460940 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
APTX-209ENST00000460940 ATP11AUNQ6ZP68 121 aa6.58□□□□□ -1.36
APTX-209ENST00000460940 Q9BRP9 147 aa6.58□□□□□ -1.36
APTX-209ENST00000460940 IGLV5-48A0A075B6I7 105 aa6.57□□□□□ -1.36
APTX-209ENST00000460940 A0A087X002 238 aa6.56□□□□□ -1.36
APTX-209ENST00000460940 DHRS4-AS1Q9P1J3 65 aa6.56□□□□□ -1.36
APTX-209ENST00000460940 SPANXA2-OT1Q8N9U9 137 aa6.56□□□□□ -1.36
APTX-209ENST00000460940 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
APTX-209ENST00000460940 ANAPC11Q9NYG5 84 aa6.54□□□□□ -1.36
APTX-209ENST00000460940 Q75L30 129 aa6.53□□□□□ -1.36
APTX-209ENST00000460940 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
APTX-209ENST00000460940 TYMSOSQ8TAI1 123 aa6.53□□□□□ -1.36
APTX-209ENST00000460940 CHKB-CPT1BH3BT56 60 aa6.53□□□□□ -1.36
APTX-209ENST00000460940 KRTAP13-2Q52LG2 175 aa6.52□□□□□ -1.37
APTX-209ENST00000460940 H3BPC8 53 aa6.51□□□□□ -1.37
APTX-209ENST00000460940 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
APTX-209ENST00000460940 A8MU10 97 aa6.51□□□□□ -1.37
APTX-209ENST00000460940 DSCR10P59022 87 aa6.51□□□□□ -1.37
APTX-209ENST00000460940 ST20-AS1Q8NBB2 130 aa6.51□□□□□ -1.37
APTX-209ENST00000460940 HCG22E2RYF7 251 aa6.5□□□□□ -1.37
APTX-209ENST00000460940 MP68P56378 58 aa6.5□□□□□ -1.37
APTX-209ENST00000460940 Q8NBF4 154 aa6.5□□□□□ -1.37
APTX-209ENST00000460940 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
APTX-209ENST00000460940 A0A1W2PNM2 257 aa6.49□□□□□ -1.37
APTX-209ENST00000460940 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
APTX-209ENST00000460940 Q8N377 158 aa6.49□□□□□ -1.37
APTX-209ENST00000460940 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
APTX-209ENST00000460940 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
APTX-209ENST00000460940 SPRR1BP22528 89 aa6.47□□□□□ -1.37
APTX-209ENST00000460940 PRR4Q16378 134 aa6.47□□□□□ -1.37
APTX-209ENST00000460940 LINC00304Q8N9R0 145 aa6.47□□□□□ -1.37
APTX-209ENST00000460940 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
APTX-209ENST00000460940 K7EQZ3 153 aa6.47□□□□□ -1.37
APTX-209ENST00000460940 HMCN2Q8NDA2 5059 aa6.45□□□□□ -1.38
APTX-209ENST00000460940 SPTSSBQ8NFR3 76 aa6.45□□□□□ -1.38
APTX-209ENST00000460940 IGLV9-49A0A0B4J1Y8 123 aa6.44□□□□□ -1.38
APTX-209ENST00000460940 MOBPQ13875 183 aa6.44□□□□□ -1.38
APTX-209ENST00000460940 SPAG11AQ6PDA7 123 aa6.44□□□□□ -1.38
APTX-209ENST00000460940 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
APTX-209ENST00000460940 A6NED7 52 aa6.43□□□□□ -1.38
APTX-209ENST00000460940 LINC00313P59037 77 aa6.43□□□□□ -1.38
APTX-209ENST00000460940 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
APTX-209ENST00000460940 DEFB105AQ8NG35 78 aa6.41□□□□□ -1.38
APTX-209ENST00000460940 SPINK1P00995 79 aa6.39□□□□□ -1.39
APTX-209ENST00000460940 H0Y9P7 68 aa6.39□□□□□ -1.39
APTX-209ENST00000460940 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
APTX-209ENST00000460940 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
APTX-209ENST00000460940 COA5Q86WW8 74 aa6.37□□□□□ -1.39
APTX-209ENST00000460940 IGLV7-46A0A075B6I9 117 aa6.35□□□□□ -1.39
APTX-209ENST00000460940 WFDC13Q8IUB5 93 aa6.34□□□□□ -1.39
APTX-209ENST00000460940 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
APTX-209ENST00000460940 IGLV8-61A0A075B6I0 122 aa6.31□□□□□ -1.4
APTX-209ENST00000460940 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
APTX-209ENST00000460940 RETNLBQ9BQ08 111 aa6.3□□□□□ -1.4
APTX-209ENST00000460940 LRP2P98164 4655 aa6.29□□□□□ -1.4
APTX-209ENST00000460940 A0A0A0MQY5 61 aa6.29□□□□□ -1.4
APTX-209ENST00000460940 LCE2AQ5TA79 106 aaPredicted RBP6.28□□□□□ -1.4
APTX-209ENST00000460940 IGFL1Q6UW32 110 aa6.28□□□□□ -1.4
APTX-209ENST00000460940 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
APTX-209ENST00000460940 A8MWP4 228 aa6.26□□□□□ -1.41
APTX-209ENST00000460940 SPINK7P58062 85 aa6.25□□□□□ -1.41
APTX-209ENST00000460940 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
APTX-209ENST00000460940 UBR4Q5T4S7 5183 aa6.24□□□□□ -1.41
APTX-209ENST00000460940 A0A087WSZ3 146 aa6.24□□□□□ -1.41
APTX-209ENST00000460940 A0A0G2JQZ4 141 aa6.24□□□□□ -1.41
APTX-209ENST00000460940 LPAP08519 4548 aa6.22□□□□□ -1.41
APTX-209ENST00000460940 TP53AIP1Q9HCN2 124 aa6.22□□□□□ -1.41
APTX-209ENST00000460940 LINC00472Q9H8W2 130 aa6.2□□□□□ -1.42
APTX-209ENST00000460940 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms