RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 TNXBP22105 4242 aa9.71□□□□□ -0.85
NELFCD-201ENST00000460601 NDUFC1O43677 76 aa9.71□□□□□ -0.86
NELFCD-201ENST00000460601 CD164Q04900 197 aa9.71□□□□□ -0.86
NELFCD-201ENST00000460601 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
NELFCD-201ENST00000460601 BPY2O14599 106 aa9.7□□□□□ -0.86
NELFCD-201ENST00000460601 Q96NJ1 140 aa9.7□□□□□ -0.86
NELFCD-201ENST00000460601 LINC00304Q8N9R0 145 aa9.69□□□□□ -0.86
NELFCD-201ENST00000460601 LINC00472Q9H8W2 130 aa9.69□□□□□ -0.86
NELFCD-201ENST00000460601 ATP5EP56381 51 aaPredicted RBP9.68□□□□□ -0.86
NELFCD-201ENST00000460601 SMIM26A0A096LP01 95 aa9.67□□□□□ -0.86
NELFCD-201ENST00000460601 DSCR10P59022 87 aa9.67□□□□□ -0.86
NELFCD-201ENST00000460601 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
NELFCD-201ENST00000460601 ABCA13Q86UQ4 5058 aa9.66□□□□□ -0.86
NELFCD-201ENST00000460601 HERC2O95714 4834 aa9.64□□□□□ -0.87
NELFCD-201ENST00000460601 K7EQZ3 153 aa9.63□□□□□ -0.87
NELFCD-201ENST00000460601 SPINK1P00995 79 aa9.63□□□□□ -0.87
NELFCD-201ENST00000460601 PRO0628Q9UI54 55 aa9.63□□□□□ -0.87
NELFCD-201ENST00000460601 KRTAP10-8P60410 259 aa9.62□□□□□ -0.87
NELFCD-201ENST00000460601 SNURFQ9Y675 71 aa9.62□□□□□ -0.87
NELFCD-201ENST00000460601 IGKV4-1P06312 121 aa9.62□□□□□ -0.87
NELFCD-201ENST00000460601 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
NELFCD-201ENST00000460601 C1orf195Q5TG92 126 aa9.58□□□□□ -0.88
NELFCD-201ENST00000460601 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
NELFCD-201ENST00000460601 LIMD2Q9BT23 127 aa9.58□□□□□ -0.88
NELFCD-201ENST00000460601 SPAG11AQ6PDA7 123 aa9.57□□□□□ -0.88
NELFCD-201ENST00000460601 ASB16-AS1Q495Z4 193 aa9.56□□□□□ -0.88
NELFCD-201ENST00000460601 TMEM254Q8TBM7 123 aa9.55□□□□□ -0.88
NELFCD-201ENST00000460601 DMBT1Q9UGM3 2413 aaPredicted RBP9.55□□□□□ -0.88
NELFCD-201ENST00000460601 A8MWP4 228 aa9.55□□□□□ -0.88
NELFCD-201ENST00000460601 RETNLBQ9BQ08 111 aa9.54□□□□□ -0.88
NELFCD-201ENST00000460601 RPS29P62273 56 aaKnown RBP9.52□□□□□ -0.89
NELFCD-201ENST00000460601 PRR15Q8IV56 129 aa9.52□□□□□ -0.89
NELFCD-201ENST00000460601 IGHV6-1A0A0B4J1U7 121 aa9.5□□□□□ -0.89
NELFCD-201ENST00000460601 NOTCH2NLQ7Z3S9 236 aa9.5□□□□□ -0.89
NELFCD-201ENST00000460601 OCR1Q9BZK8 76 aa9.5□□□□□ -0.89
NELFCD-201ENST00000460601 A0A0U1RQV1 116 aa9.49□□□□□ -0.89
NELFCD-201ENST00000460601 NDUFB1O75438 58 aa9.47□□□□□ -0.89
NELFCD-201ENST00000460601 A0A1B0GVX0 72 aa9.46□□□□□ -0.89
NELFCD-201ENST00000460601 WFDC13Q8IUB5 93 aa9.46□□□□□ -0.89
NELFCD-201ENST00000460601 PCLOQ9Y6V0 5065 aa9.45□□□□□ -0.9
NELFCD-201ENST00000460601 HCG22E2RYF7 251 aa9.44□□□□□ -0.9
NELFCD-201ENST00000460601 MMP24-AS1A0A0U1RRL7 71 aa9.43□□□□□ -0.9
NELFCD-201ENST00000460601 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
NELFCD-201ENST00000460601 C8orf17Q9NRJ1 99 aa9.41□□□□□ -0.9
NELFCD-201ENST00000460601 CASC2Q6XLA1 102 aa9.38□□□□□ -0.91
NELFCD-201ENST00000460601 hDV103S1A0JD37 113 aa9.37□□□□□ -0.91
NELFCD-201ENST00000460601 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
NELFCD-201ENST00000460601 LINC00313P59037 77 aa9.34□□□□□ -0.91
NELFCD-201ENST00000460601 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
NELFCD-201ENST00000460601 J3QL48 77 aa9.33□□□□□ -0.92
NELFCD-201ENST00000460601 MPLKIPQ8TAP9 179 aa9.33□□□□□ -0.92
NELFCD-201ENST00000460601 C8orf87E5RJ46 101 aa9.29□□□□□ -0.92
NELFCD-201ENST00000460601 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
NELFCD-201ENST00000460601 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
NELFCD-201ENST00000460601 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
NELFCD-201ENST00000460601 Q1T7F1 81 aa9.26□□□□□ -0.93
NELFCD-201ENST00000460601 NDUFS5O43920 106 aa9.26□□□□□ -0.93
NELFCD-201ENST00000460601 PRR4Q16378 134 aa9.25□□□□□ -0.93
NELFCD-201ENST00000460601 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
NELFCD-201ENST00000460601 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
NELFCD-201ENST00000460601 C1orf64Q8NEQ6 169 aa9.23□□□□□ -0.93
NELFCD-201ENST00000460601 LPAP08519 4548 aa9.22□□□□□ -0.93
NELFCD-201ENST00000460601 V9GYY9 64 aa9.2□□□□□ -0.94
NELFCD-201ENST00000460601 Q8N9P0 234 aaPredicted RBP9.19□□□□□ -0.94
NELFCD-201ENST00000460601 HERC1Q15751 4861 aa9.18□□□□□ -0.94
NELFCD-201ENST00000460601 KRTAP13-3Q3SY46 172 aa9.17□□□□□ -0.94
NELFCD-201ENST00000460601 Q5W150 140 aa9.14□□□□□ -0.95
NELFCD-201ENST00000460601 TRAV22A0A0B4J277 110 aa9.11□□□□□ -0.95
NELFCD-201ENST00000460601 TP53AIP1Q9HCN2 124 aa9.11□□□□□ -0.95
NELFCD-201ENST00000460601 MP68P56378 58 aa9.1□□□□□ -0.95
NELFCD-201ENST00000460601 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
NELFCD-201ENST00000460601 XP32Q5T750 250 aa9.09□□□□□ -0.95
NELFCD-201ENST00000460601 LRP2P98164 4655 aa9.09□□□□□ -0.95
NELFCD-201ENST00000460601 H0Y9P7 68 aa9.08□□□□□ -0.96
NELFCD-201ENST00000460601 A8MUU9 505 aa9.08□□□□□ -0.96
NELFCD-201ENST00000460601 H3BPC8 53 aa9.08□□□□□ -0.96
NELFCD-201ENST00000460601 SEC61GP60059 68 aa9.07□□□□□ -0.96
NELFCD-201ENST00000460601 SPANXA2-OT1Q8N9U9 137 aa9.07□□□□□ -0.96
NELFCD-201ENST00000460601 TPRXLQ17RH7 258 aa9.06□□□□□ -0.96
NELFCD-201ENST00000460601 PMAIP1Q13794 54 aa9.05□□□□□ -0.96
NELFCD-201ENST00000460601 PSPHP1O15172 72 aa9.04□□□□□ -0.96
NELFCD-201ENST00000460601 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
NELFCD-201ENST00000460601 Q75L30 129 aa9.02□□□□□ -0.96
NELFCD-201ENST00000460601 A8MUN3 132 aa8.99□□□□□ -0.97
NELFCD-201ENST00000460601 RPL37P61927 97 aaKnown RBP8.98□□□□□ -0.97
NELFCD-201ENST00000460601 Q5VV11 94 aa8.98□□□□□ -0.97
NELFCD-201ENST00000460601 HMCN2Q8NDA2 5059 aa8.96□□□□□ -0.98
NELFCD-201ENST00000460601 IGKV2D-30A0A075B6S6 120 aa8.92□□□□□ -0.98
NELFCD-201ENST00000460601 IGKV2-30P06310 120 aa8.92□□□□□ -0.98
NELFCD-201ENST00000460601 ATP11AUNQ6ZP68 121 aa8.92□□□□□ -0.98
NELFCD-201ENST00000460601 PCOTHQ58A44 107 aa8.9□□□□□ -0.98
NELFCD-201ENST00000460601 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
NELFCD-201ENST00000460601 CHKB-CPT1BH3BT56 60 aa8.87□□□□□ -0.99
NELFCD-201ENST00000460601 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
NELFCD-201ENST00000460601 COA5Q86WW8 74 aa8.83□□□□□ -1
NELFCD-201ENST00000460601 SPINK7P58062 85 aa8.82□□□□□ -1
NELFCD-201ENST00000460601 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
NELFCD-201ENST00000460601 A8MU10 97 aa8.81□□□□□ -1
NELFCD-201ENST00000460601 MUC2Q02817 5179 aa8.79□□□□□ -1
NELFCD-201ENST00000460601 KTN1-AS1Q86SY8 53 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms