RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
LSG1-204ENST00000460584 DNAL4O96015 105 aa5.53□□□□□ -1.52
LSG1-204ENST00000460584 TRACP01848 142 aa5.53□□□□□ -1.52
LSG1-204ENST00000460584 S100A1P23297 94 aa5.53□□□□□ -1.52
LSG1-204ENST00000460584 DEFB116Q30KQ4 102 aa5.53□□□□□ -1.52
LSG1-204ENST00000460584 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
LSG1-204ENST00000460584 LINC00846Q9NV44 126 aa5.53□□□□□ -1.52
LSG1-204ENST00000460584 VAMP8Q9BV40 100 aa5.52□□□□□ -1.53
LSG1-204ENST00000460584 SPINK7P58062 85 aa5.51□□□□□ -1.53
LSG1-204ENST00000460584 C21orf62-AS1Q17RA5 79 aa5.51□□□□□ -1.53
LSG1-204ENST00000460584 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
LSG1-204ENST00000460584 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
LSG1-204ENST00000460584 J3KT08 172 aa5.5□□□□□ -1.53
LSG1-204ENST00000460584 COX6CP09669 75 aa5.5□□□□□ -1.53
LSG1-204ENST00000460584 A8MWP4 228 aa5.49□□□□□ -1.53
LSG1-204ENST00000460584 HSD52Q0P140 79 aa5.48□□□□□ -1.53
LSG1-204ENST00000460584 RBM3P98179 157 aaKnown RBP5.47□□□□□ -1.53
LSG1-204ENST00000460584 A0A1B0GV72 72 aa5.46□□□□□ -1.54
LSG1-204ENST00000460584 PSMB2P49721 201 aa5.45□□□□□ -1.54
LSG1-204ENST00000460584 Q6ZQT0 140 aa5.45□□□□□ -1.54
LSG1-204ENST00000460584 A0A1B0GW54 56 aa5.44□□□□□ -1.54
LSG1-204ENST00000460584 K7ERJ3 54 aa5.44□□□□□ -1.54
LSG1-204ENST00000460584 DSCR8Q96T75 97 aa5.44□□□□□ -1.54
LSG1-204ENST00000460584 NDUFB1O75438 58 aa5.42□□□□□ -1.54
LSG1-204ENST00000460584 KRTAP6-3Q3LI67 103 aa5.42□□□□□ -1.54
LSG1-204ENST00000460584 C9JAW5 83 aa5.41□□□□□ -1.54
LSG1-204ENST00000460584 WFDC13Q8IUB5 93 aa5.41□□□□□ -1.54
LSG1-204ENST00000460584 VPS25Q9BRG1 176 aa5.41□□□□□ -1.54
LSG1-204ENST00000460584 C8orf17Q9NRJ1 99 aa5.41□□□□□ -1.54
LSG1-204ENST00000460584 PYY3Q5JQD4 70 aa5.39□□□□□ -1.55
LSG1-204ENST00000460584 BAALC-AS2P0C853 105 aa5.38□□□□□ -1.55
LSG1-204ENST00000460584 LOC110117498A0A087WWA1 95 aa5.37□□□□□ -1.55
LSG1-204ENST00000460584 IGKV3D-7A0A0C4DH55 119 aa5.37□□□□□ -1.55
LSG1-204ENST00000460584 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
LSG1-204ENST00000460584 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
LSG1-204ENST00000460584 TMA7Q9Y2S6 64 aaKnown RBP5.37□□□□□ -1.55
LSG1-204ENST00000460584 PDE6GP18545 87 aa5.36□□□□□ -1.55
LSG1-204ENST00000460584 Q6ZVQ6 151 aa5.36□□□□□ -1.55
LSG1-204ENST00000460584 JMJD7-PLA2G4BH0Y9G9 81 aa5.35□□□□□ -1.55
LSG1-204ENST00000460584 SCGB1C2P0DMR2 95 aa5.35□□□□□ -1.55
LSG1-204ENST00000460584 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
LSG1-204ENST00000460584 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
LSG1-204ENST00000460584 UQCR10Q9UDW1 63 aa5.35□□□□□ -1.55
LSG1-204ENST00000460584 LYRM7Q5U5X0 104 aa5.32□□□□□ -1.56
LSG1-204ENST00000460584 TMEM254Q8TBM7 123 aa5.32□□□□□ -1.56
LSG1-204ENST00000460584 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
LSG1-204ENST00000460584 MMP24-AS1A0A0U1RRL7 71 aa5.3□□□□□ -1.56
LSG1-204ENST00000460584 ATXN8Q156A1 80 aa5.28□□□□□ -1.56
LSG1-204ENST00000460584 NREPQ16612 68 aa5.26□□□□□ -1.57
LSG1-204ENST00000460584 hDV103S1A0JD37 113 aa5.25□□□□□ -1.57
LSG1-204ENST00000460584 C14orf132Q9NPU4 83 aa5.24□□□□□ -1.57
LSG1-204ENST00000460584 NEBP20929 6669 aa5.24□□□□□ -1.57
LSG1-204ENST00000460584 K7EQZ3 153 aa5.22□□□□□ -1.57
LSG1-204ENST00000460584 Q5W150 140 aa5.22□□□□□ -1.57
LSG1-204ENST00000460584 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
LSG1-204ENST00000460584 M0R143 59 aa5.21□□□□□ -1.58
LSG1-204ENST00000460584 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
LSG1-204ENST00000460584 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
LSG1-204ENST00000460584 MT1BP07438 61 aa5.19□□□□□ -1.58
LSG1-204ENST00000460584 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
LSG1-204ENST00000460584 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
LSG1-204ENST00000460584 NDUFS5O43920 106 aa5.17□□□□□ -1.58
LSG1-204ENST00000460584 NAA38Q9BRA0 125 aaKnown RBP5.17□□□□□ -1.58
LSG1-204ENST00000460584 A6NN06 94 aa5.16□□□□□ -1.58
LSG1-204ENST00000460584 MUC12Q9UKN1 5478 aa5.14□□□□□ -1.59
LSG1-204ENST00000460584 H3BT86 120 aa5.14□□□□□ -1.59
LSG1-204ENST00000460584 BPY2O14599 106 aa5.14□□□□□ -1.59
LSG1-204ENST00000460584 CXCL6P80162 114 aa5.13□□□□□ -1.59
LSG1-204ENST00000460584 C4orf26Q17RF5 130 aa5.13□□□□□ -1.59
LSG1-204ENST00000460584 Q5VV11 94 aa5.13□□□□□ -1.59
LSG1-204ENST00000460584 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
LSG1-204ENST00000460584 KRTAP5-9P26371 169 aa5.12□□□□□ -1.59
LSG1-204ENST00000460584 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
LSG1-204ENST00000460584 HCG22E2RYF7 251 aa5.11□□□□□ -1.59
LSG1-204ENST00000460584 CASC2Q6XLA1 102 aa5.11□□□□□ -1.59
LSG1-204ENST00000460584 C5orf47Q569G3 176 aa5.09□□□□□ -1.59
LSG1-204ENST00000460584 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
LSG1-204ENST00000460584 FAM236AA0A1B0GUQ0 79 aa5.08□□□□□ -1.6
LSG1-204ENST00000460584 FAM236BA0A1B0GV22 79 aa5.08□□□□□ -1.6
LSG1-204ENST00000460584 KRTAP20-1Q3LI63 56 aa5.06□□□□□ -1.6
LSG1-204ENST00000460584 Q8N9L7 120 aa5.06□□□□□ -1.6
LSG1-204ENST00000460584 S4R3F8 94 aa5.06□□□□□ -1.6
LSG1-204ENST00000460584 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
LSG1-204ENST00000460584 LCA10Q71F78 164 aa5.05□□□□□ -1.6
LSG1-204ENST00000460584 C9orf118A6NHY6 69 aa5.04□□□□□ -1.6
LSG1-204ENST00000460584 C1orf64Q8NEQ6 169 aa5.03□□□□□ -1.6
LSG1-204ENST00000460584 A0A1W2PPM0 123 aa5.02□□□□□ -1.61
LSG1-204ENST00000460584 SMIM6P0DI80 62 aa5.02□□□□□ -1.61
LSG1-204ENST00000460584 KMT2DO14686 5537 aa5.02□□□□□ -1.61
LSG1-204ENST00000460584 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
LSG1-204ENST00000460584 TAX1BP3O14907 124 aa5□□□□□ -1.61
LSG1-204ENST00000460584 TSTD3H0UI37 97 aa4.99□□□□□ -1.61
LSG1-204ENST00000460584 TP53AIP1Q9HCN2 124 aa4.98□□□□□ -1.61
LSG1-204ENST00000460584 UBL5Q9BZL1 73 aa4.96□□□□□ -1.62
LSG1-204ENST00000460584 MDN1Q9NU22 5596 aa4.96□□□□□ -1.62
LSG1-204ENST00000460584 BATFQ16520 125 aa4.95□□□□□ -1.62
LSG1-204ENST00000460584 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
LSG1-204ENST00000460584 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
LSG1-204ENST00000460584 H0YAA0 97 aa4.91□□□□□ -1.62
LSG1-204ENST00000460584 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms