RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
SYT1-204ENST00000457153 ANK3Q12955 4377 aaKnown RBP8.27□□□□□ -1.09
SYT1-204ENST00000457153 VWFP04275 2813 aa8.26□□□□□ -1.09
SYT1-204ENST00000457153 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
SYT1-204ENST00000457153 KTN1-AS1Q86SY8 53 aa8.26□□□□□ -1.09
SYT1-204ENST00000457153 SMR3BP02814 79 aaPredicted RBP8.25□□□□□ -1.09
SYT1-204ENST00000457153 KRTAP10-1P60331 282 aa8.25□□□□□ -1.09
SYT1-204ENST00000457153 OTOGQ6ZRI0 2925 aa8.24□□□□□ -1.09
SYT1-204ENST00000457153 C9orf92A6NGG3 77 aa8.21□□□□□ -1.1
SYT1-204ENST00000457153 DMAC1Q96GE9 116 aa8.21□□□□□ -1.1
SYT1-204ENST00000457153 A0A087X002 238 aa8.2□□□□□ -1.1
SYT1-204ENST00000457153 NOTCH2NLQ7Z3S9 236 aa8.2□□□□□ -1.1
SYT1-204ENST00000457153 CSMD2Q7Z408 3487 aa8.18□□□□□ -1.1
SYT1-204ENST00000457153 Q8N1X5 172 aa8.16□□□□□ -1.1
SYT1-204ENST00000457153 NBPF19A0A087WUL8 3843 aa8.14□□□□□ -1.11
SYT1-204ENST00000457153 SPINK7P58062 85 aa8.09□□□□□ -1.11
SYT1-204ENST00000457153 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
SYT1-204ENST00000457153 KRTAP13-2Q52LG2 175 aa8.08□□□□□ -1.12
SYT1-204ENST00000457153 LCA10Q71F78 164 aa8.07□□□□□ -1.12
SYT1-204ENST00000457153 VPS13CQ709C8 3753 aa8.03□□□□□ -1.12
SYT1-204ENST00000457153 Q6ZSA8 131 aa8.03□□□□□ -1.12
SYT1-204ENST00000457153 A0A1B0GU33 70 aa7.96□□□□□ -1.13
SYT1-204ENST00000457153 KRTAP21-3Q3LHN1 58 aa7.95□□□□□ -1.14
SYT1-204ENST00000457153 PKD1L1Q8TDX9 2849 aa7.92□□□□□ -1.14
SYT1-204ENST00000457153 ZFHX3Q15911 3703 aa7.92□□□□□ -1.14
SYT1-204ENST00000457153 RBM12B-AS1Q9P1G2 102 aa7.92□□□□□ -1.14
SYT1-204ENST00000457153 CUBNO60494 3623 aa7.91□□□□□ -1.14
SYT1-204ENST00000457153 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
SYT1-204ENST00000457153 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.15
SYT1-204ENST00000457153 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
SYT1-204ENST00000457153 TRRAPQ9Y4A5 3859 aa7.88□□□□□ -1.15
SYT1-204ENST00000457153 ZNF469Q96JG9 3925 aaPredicted RBP7.87□□□□□ -1.15
SYT1-204ENST00000457153 A6NN06 94 aa7.85□□□□□ -1.15
SYT1-204ENST00000457153 AKAP9Q99996 3911 aa7.85□□□□□ -1.15
SYT1-204ENST00000457153 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
SYT1-204ENST00000457153 A8MU10 97 aa7.81□□□□□ -1.16
SYT1-204ENST00000457153 DMBT1Q9UGM3 2413 aaPredicted RBP7.8□□□□□ -1.16
SYT1-204ENST00000457153 Q5VSD8 79 aa7.79□□□□□ -1.16
SYT1-204ENST00000457153 KRTAP16-1A8MUX0 517 aa7.79□□□□□ -1.16
SYT1-204ENST00000457153 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
SYT1-204ENST00000457153 A8MUU9 505 aa7.78□□□□□ -1.16
SYT1-204ENST00000457153 C20orf166-AS1Q96NR2 134 aa7.77□□□□□ -1.17
SYT1-204ENST00000457153 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
SYT1-204ENST00000457153 PRAC1Q96KF2 57 aa7.75□□□□□ -1.17
SYT1-204ENST00000457153 S4R3F8 94 aa7.75□□□□□ -1.17
SYT1-204ENST00000457153 LINC01554Q52M75 96 aa7.73□□□□□ -1.17
SYT1-204ENST00000457153 J3QL48 77 aa7.71□□□□□ -1.17
SYT1-204ENST00000457153 A0A0D9SG42 100 aa7.71□□□□□ -1.18
SYT1-204ENST00000457153 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
SYT1-204ENST00000457153 TGP01266 2768 aa7.69□□□□□ -1.18
SYT1-204ENST00000457153 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
SYT1-204ENST00000457153 TENM2Q9NT68 2774 aa7.65□□□□□ -1.19
SYT1-204ENST00000457153 HUWE1Q7Z6Z7 4374 aaKnown RBP7.63□□□□□ -1.19
SYT1-204ENST00000457153 RPL37P61927 97 aaKnown RBP7.62□□□□□ -1.19
SYT1-204ENST00000457153 SPINT4Q6UDR6 99 aa7.61□□□□□ -1.19
SYT1-204ENST00000457153 ROMO1P60602 79 aa7.53□□□□□ -1.2
SYT1-204ENST00000457153 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
SYT1-204ENST00000457153 SRRM2Q9UQ35 2752 aaKnown RBP7.51□□□□□ -1.21
SYT1-204ENST00000457153 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
SYT1-204ENST00000457153 ADM2Q7Z4H4 148 aa7.46□□□□□ -1.22
SYT1-204ENST00000457153 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.22
SYT1-204ENST00000457153 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
SYT1-204ENST00000457153 XP32Q5T750 250 aa7.41□□□□□ -1.22
SYT1-204ENST00000457153 R4GN34 69 aa7.4□□□□□ -1.22
SYT1-204ENST00000457153 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
SYT1-204ENST00000457153 H0YAA0 97 aa7.38□□□□□ -1.23
SYT1-204ENST00000457153 DNAH9Q9NYC9 4486 aa7.38□□□□□ -1.23
SYT1-204ENST00000457153 M0QZ58 72 aa7.36□□□□□ -1.23
SYT1-204ENST00000457153 FLG2Q5D862 2391 aaPredicted RBP7.36□□□□□ -1.23
SYT1-204ENST00000457153 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
SYT1-204ENST00000457153 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
SYT1-204ENST00000457153 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
SYT1-204ENST00000457153 KRTAP3-1Q9BYR8 98 aa7.23□□□□□ -1.25
SYT1-204ENST00000457153 PLECQ15149 4684 aaKnown RBP7.21□□□□□ -1.26
SYT1-204ENST00000457153 DNAH1Q9P2D7 4330 aa7.18□□□□□ -1.26
SYT1-204ENST00000457153 VPS13DQ5THJ4 4388 aa7.18□□□□□ -1.26
SYT1-204ENST00000457153 DNAH3Q8TD57 4116 aa7.17□□□□□ -1.26
SYT1-204ENST00000457153 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.26
SYT1-204ENST00000457153 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
SYT1-204ENST00000457153 KRTAP10-4P60372 401 aaPredicted RBP7.14□□□□□ -1.27
SYT1-204ENST00000457153 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
SYT1-204ENST00000457153 ALMS1Q8TCU4 4167 aa7.09□□□□□ -1.27
SYT1-204ENST00000457153 H3BS24 57 aa7.09□□□□□ -1.27
SYT1-204ENST00000457153 P0C880 135 aa7.08□□□□□ -1.28
SYT1-204ENST00000457153 CSMD3Q7Z407 3707 aa7.06□□□□□ -1.28
SYT1-204ENST00000457153 LUZP6Q538Z0 58 aa7.06□□□□□ -1.28
SYT1-204ENST00000457153 ANK2Q01484 3957 aa7.04□□□□□ -1.28
SYT1-204ENST00000457153 M0R2T5 61 aa7.04□□□□□ -1.28
SYT1-204ENST00000457153 CMYA5Q8N3K9 4069 aa7.03□□□□□ -1.28
SYT1-204ENST00000457153 STARD9Q9P2P6 4700 aa7□□□□□ -1.29
SYT1-204ENST00000457153 DYNC2H1Q8NCM8 4307 aaKnown RBP6.97□□□□□ -1.29
SYT1-204ENST00000457153 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
SYT1-204ENST00000457153 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
SYT1-204ENST00000457153 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
SYT1-204ENST00000457153 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
SYT1-204ENST00000457153 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
SYT1-204ENST00000457153 DNAH2Q9P225 4427 aa6.89□□□□□ -1.31
SYT1-204ENST00000457153 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
SYT1-204ENST00000457153 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
SYT1-204ENST00000457153 DNAH5Q8TE73 4624 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms