RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 KRTAP4-16G5E9R7 235 aaPredicted RBP7.4□□□□□ -1.23
NEDD4L-208ENST00000456173 H1FX-AS1Q4G0G2 97 aa7.39□□□□□ -1.23
NEDD4L-208ENST00000456173 ASH1LQ9NR48 2969 aaKnown RBP7.39□□□□□ -1.23
NEDD4L-208ENST00000456173 SMG1Q96Q15 3661 aaKnown RBP7.39□□□□□ -1.23
NEDD4L-208ENST00000456173 NIPBLQ6KC79 2804 aaeCLIP7.37□□□□□ -1.23
NEDD4L-208ENST00000456173 SMR3BP02814 79 aaPredicted RBP7.37□□□□□ -1.23
NEDD4L-208ENST00000456173 A0A087X002 238 aa7.36□□□□□ -1.23
NEDD4L-208ENST00000456173 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
NEDD4L-208ENST00000456173 NSD1Q96L73 2696 aaPredicted RBP7.36□□□□□ -1.23
NEDD4L-208ENST00000456173 NF1P21359 2839 aa7.34□□□□□ -1.24
NEDD4L-208ENST00000456173 HRNRQ86YZ3 2850 aaPredicted RBP7.33□□□□□ -1.24
NEDD4L-208ENST00000456173 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
NEDD4L-208ENST00000456173 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
NEDD4L-208ENST00000456173 LINC00483Q53H64 154 aa7.28□□□□□ -1.24
NEDD4L-208ENST00000456173 STAB2Q8WWQ8 2551 aa7.27□□□□□ -1.25
NEDD4L-208ENST00000456173 FBN2P35556 2912 aa7.26□□□□□ -1.25
NEDD4L-208ENST00000456173 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
NEDD4L-208ENST00000456173 A8MUU9 505 aa7.23□□□□□ -1.25
NEDD4L-208ENST00000456173 PANO1I0J062 215 aa7.23□□□□□ -1.25
NEDD4L-208ENST00000456173 S4R3F8 94 aa7.23□□□□□ -1.25
NEDD4L-208ENST00000456173 KRTAP1-5Q9BYS1 174 aa7.22□□□□□ -1.25
NEDD4L-208ENST00000456173 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
NEDD4L-208ENST00000456173 TENM4Q6N022 2769 aa7.18□□□□□ -1.26
NEDD4L-208ENST00000456173 KMT2BQ9UMN6 2715 aaPredicted RBP7.17□□□□□ -1.26
NEDD4L-208ENST00000456173 KRTAP11-1Q8IUC1 163 aa7.15□□□□□ -1.27
NEDD4L-208ENST00000456173 KRTAP7-1Q8IUC3 87 aa7.15□□□□□ -1.27
NEDD4L-208ENST00000456173 R4GN34 69 aa7.14□□□□□ -1.27
NEDD4L-208ENST00000456173 MXRA5Q9NR99 2828 aa7.12□□□□□ -1.27
NEDD4L-208ENST00000456173 Q6ZSA8 131 aa7.1□□□□□ -1.27
NEDD4L-208ENST00000456173 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
NEDD4L-208ENST00000456173 CELSR1Q9NYQ6 3014 aa7.07□□□□□ -1.28
NEDD4L-208ENST00000456173 M0QZ58 72 aa7.06□□□□□ -1.28
NEDD4L-208ENST00000456173 SVEP1Q4LDE5 3571 aa7.06□□□□□ -1.28
NEDD4L-208ENST00000456173 ZFHX3Q15911 3703 aa7.05□□□□□ -1.28
NEDD4L-208ENST00000456173 CSMD1Q96PZ7 3565 aa7.05□□□□□ -1.28
NEDD4L-208ENST00000456173 NBPF19A0A087WUL8 3843 aa7.04□□□□□ -1.28
NEDD4L-208ENST00000456173 SPENQ96T58 3664 aaKnown RBP7.02□□□□□ -1.29
NEDD4L-208ENST00000456173 CSMD2Q7Z408 3487 aa7.02□□□□□ -1.29
NEDD4L-208ENST00000456173 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
NEDD4L-208ENST00000456173 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
NEDD4L-208ENST00000456173 CUBNO60494 3623 aa6.98□□□□□ -1.29
NEDD4L-208ENST00000456173 PLAC4Q8WY50 150 aa6.95□□□□□ -1.3
NEDD4L-208ENST00000456173 J3QL48 77 aa6.94□□□□□ -1.3
NEDD4L-208ENST00000456173 H0YAA0 97 aa6.91□□□□□ -1.3
NEDD4L-208ENST00000456173 FBN1P35555 2871 aaKnown RBP6.9□□□□□ -1.3
NEDD4L-208ENST00000456173 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.31
NEDD4L-208ENST00000456173 PDZD2O15018 2839 aa6.89□□□□□ -1.31
NEDD4L-208ENST00000456173 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
NEDD4L-208ENST00000456173 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
NEDD4L-208ENST00000456173 KRTAP10-1P60331 282 aa6.86□□□□□ -1.31
NEDD4L-208ENST00000456173 BSNQ9UPA5 3926 aa6.85□□□□□ -1.31
NEDD4L-208ENST00000456173 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
NEDD4L-208ENST00000456173 VWFP04275 2813 aa6.79□□□□□ -1.32
NEDD4L-208ENST00000456173 PKD1L1Q8TDX9 2849 aa6.78□□□□□ -1.32
NEDD4L-208ENST00000456173 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
NEDD4L-208ENST00000456173 P0C880 135 aa6.75□□□□□ -1.33
NEDD4L-208ENST00000456173 M0R2T5 61 aa6.71□□□□□ -1.33
NEDD4L-208ENST00000456173 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
NEDD4L-208ENST00000456173 Q6ZRN7 208 aaPredicted RBP6.7□□□□□ -1.34
NEDD4L-208ENST00000456173 TGP01266 2768 aa6.64□□□□□ -1.35
NEDD4L-208ENST00000456173 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
NEDD4L-208ENST00000456173 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
NEDD4L-208ENST00000456173 TENM2Q9NT68 2774 aa6.59□□□□□ -1.36
NEDD4L-208ENST00000456173 VPS13CQ709C8 3753 aa6.57□□□□□ -1.36
NEDD4L-208ENST00000456173 TNP1P09430 55 aa6.54□□□□□ -1.36
NEDD4L-208ENST00000456173 Q5VSD8 79 aa6.54□□□□□ -1.36
NEDD4L-208ENST00000456173 TRRAPQ9Y4A5 3859 aa6.54□□□□□ -1.36
NEDD4L-208ENST00000456173 KRTAP13-3Q3SY46 172 aa6.53□□□□□ -1.36
NEDD4L-208ENST00000456173 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
NEDD4L-208ENST00000456173 TPRXLQ17RH7 258 aa6.5□□□□□ -1.37
NEDD4L-208ENST00000456173 ZNF469Q96JG9 3925 aaPredicted RBP6.44□□□□□ -1.38
NEDD4L-208ENST00000456173 ANK3Q12955 4377 aaKnown RBP6.44□□□□□ -1.38
NEDD4L-208ENST00000456173 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
NEDD4L-208ENST00000456173 KRTAP21-3Q3LHN1 58 aa6.39□□□□□ -1.39
NEDD4L-208ENST00000456173 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
NEDD4L-208ENST00000456173 SRRM2Q9UQ35 2752 aaKnown RBP6.35□□□□□ -1.39
NEDD4L-208ENST00000456173 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
NEDD4L-208ENST00000456173 XP32Q5T750 250 aa6.25□□□□□ -1.41
NEDD4L-208ENST00000456173 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
NEDD4L-208ENST00000456173 KRTAP12-1P59990 96 aa6.21□□□□□ -1.41
NEDD4L-208ENST00000456173 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
NEDD4L-208ENST00000456173 AKAP9Q99996 3911 aa6.18□□□□□ -1.42
NEDD4L-208ENST00000456173 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
NEDD4L-208ENST00000456173 COL7A1Q02388 2944 aa6.16□□□□□ -1.42
NEDD4L-208ENST00000456173 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
NEDD4L-208ENST00000456173 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
NEDD4L-208ENST00000456173 MEGF8Q7Z7M0 2845 aa6.06□□□□□ -1.44
NEDD4L-208ENST00000456173 DNHD1Q96M86 4753 aa5.96□□□□□ -1.45
NEDD4L-208ENST00000456173 CSMD3Q7Z407 3707 aa5.94□□□□□ -1.46
NEDD4L-208ENST00000456173 HUWE1Q7Z6Z7 4374 aaKnown RBP5.85□□□□□ -1.47
NEDD4L-208ENST00000456173 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
NEDD4L-208ENST00000456173 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
NEDD4L-208ENST00000456173 INE1O15225 51 aa5.82□□□□□ -1.48
NEDD4L-208ENST00000456173 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
NEDD4L-208ENST00000456173 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
NEDD4L-208ENST00000456173 DNAH9Q9NYC9 4486 aa5.73□□□□□ -1.49
NEDD4L-208ENST00000456173 PRKDCP78527 4128 aaKnown RBP5.64□□□□□ -1.51
NEDD4L-208ENST00000456173 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
NEDD4L-208ENST00000456173 STARD9Q9P2P6 4700 aa5.53□□□□□ -1.52
NEDD4L-208ENST00000456173 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms