RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 NUPR2A6NF83 97 aa7.74□□□□□ -1.17
LINC00473-202ENST00000455853 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
LINC00473-202ENST00000455853 PCOTHQ58A44 107 aa7.73□□□□□ -1.17
LINC00473-202ENST00000455853 HYDINQ4G0P3 5121 aa7.73□□□□□ -1.17
LINC00473-202ENST00000455853 A6NED7 52 aa7.73□□□□□ -1.17
LINC00473-202ENST00000455853 PLAC8Q9NZF1 115 aa7.73□□□□□ -1.17
LINC00473-202ENST00000455853 ALMS1Q8TCU4 4167 aa7.73□□□□□ -1.17
LINC00473-202ENST00000455853 IGHV6-1A0A0B4J1U7 121 aa7.72□□□□□ -1.17
LINC00473-202ENST00000455853 NDUFS5O43920 106 aa7.72□□□□□ -1.17
LINC00473-202ENST00000455853 CDC42SE1Q9NRR8 79 aa7.72□□□□□ -1.17
LINC00473-202ENST00000455853 LY6G6CO95867 125 aa7.71□□□□□ -1.17
LINC00473-202ENST00000455853 DNAH10Q8IVF4 4471 aa7.71□□□□□ -1.18
LINC00473-202ENST00000455853 PANO1I0J062 215 aa7.71□□□□□ -1.18
LINC00473-202ENST00000455853 IGLV5-52A0A0A0MRZ9 124 aa7.68□□□□□ -1.18
LINC00473-202ENST00000455853 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
LINC00473-202ENST00000455853 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
LINC00473-202ENST00000455853 ZNF861PO60384 105 aa7.67□□□□□ -1.18
LINC00473-202ENST00000455853 HRES1P13985 223 aa7.66□□□□□ -1.18
LINC00473-202ENST00000455853 LCA10Q71F78 164 aa7.66□□□□□ -1.18
LINC00473-202ENST00000455853 EPPK1P58107 5090 aaKnown RBP7.66□□□□□ -1.18
LINC00473-202ENST00000455853 KMT2AQ03164 3969 aa7.65□□□□□ -1.18
LINC00473-202ENST00000455853 C8orf87E5RJ46 101 aa7.65□□□□□ -1.18
LINC00473-202ENST00000455853 PSORS1C2Q9UIG4 136 aa7.65□□□□□ -1.18
LINC00473-202ENST00000455853 A0A087WTM6 91 aa7.64□□□□□ -1.19
LINC00473-202ENST00000455853 SPAG11AQ6PDA7 123 aa7.64□□□□□ -1.19
LINC00473-202ENST00000455853 A8MU10 97 aa7.63□□□□□ -1.19
LINC00473-202ENST00000455853 SPTSSBQ8NFR3 76 aa7.63□□□□□ -1.19
LINC00473-202ENST00000455853 A6NN06 94 aa7.61□□□□□ -1.19
LINC00473-202ENST00000455853 RTL8CO15255 209 aa7.61□□□□□ -1.19
LINC00473-202ENST00000455853 ACYP2P14621 99 aa7.6□□□□□ -1.19
LINC00473-202ENST00000455853 KRTAP13-3Q3SY46 172 aa7.6□□□□□ -1.19
LINC00473-202ENST00000455853 SRRM2Q9UQ35 2752 aaKnown RBP7.59□□□□□ -1.19
LINC00473-202ENST00000455853 SSBP3-AS1Q7Z2R9 100 aa7.59□□□□□ -1.19
LINC00473-202ENST00000455853 BIRC6Q9NR09 4857 aa7.57□□□□□ -1.2
LINC00473-202ENST00000455853 VPS13DQ5THJ4 4388 aa7.57□□□□□ -1.2
LINC00473-202ENST00000455853 A0A087X002 238 aa7.56□□□□□ -1.2
LINC00473-202ENST00000455853 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
LINC00473-202ENST00000455853 IGLV7-43P04211 117 aa7.55□□□□□ -1.2
LINC00473-202ENST00000455853 FRAS1Q86XX4 4008 aa7.54□□□□□ -1.2
LINC00473-202ENST00000455853 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
LINC00473-202ENST00000455853 C7orf65Q6ZTY9 151 aa7.54□□□□□ -1.2
LINC00473-202ENST00000455853 DMAC1Q96GE9 116 aa7.53□□□□□ -1.2
LINC00473-202ENST00000455853 Q5W150 140 aa7.52□□□□□ -1.2
LINC00473-202ENST00000455853 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.2
LINC00473-202ENST00000455853 SPINK7P58062 85 aa7.52□□□□□ -1.21
LINC00473-202ENST00000455853 ANAPC11Q9NYG5 84 aa7.51□□□□□ -1.21
LINC00473-202ENST00000455853 DNAH6Q9C0G6 4158 aa7.51□□□□□ -1.21
LINC00473-202ENST00000455853 CIRBP-AS1Q8TBR5 109 aa7.5□□□□□ -1.21
LINC00473-202ENST00000455853 LINC00313P59037 77 aa7.49□□□□□ -1.21
LINC00473-202ENST00000455853 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
LINC00473-202ENST00000455853 DNAH2Q9P225 4427 aa7.47□□□□□ -1.21
LINC00473-202ENST00000455853 DNAH17Q9UFH2 4485 aa7.47□□□□□ -1.21
LINC00473-202ENST00000455853 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
LINC00473-202ENST00000455853 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
LINC00473-202ENST00000455853 DNAH8Q96JB1 4490 aa7.45□□□□□ -1.22
LINC00473-202ENST00000455853 HECTD4Q9Y4D8 3996 aa7.45□□□□□ -1.22
LINC00473-202ENST00000455853 FAT2Q9NYQ8 4349 aa7.44□□□□□ -1.22
LINC00473-202ENST00000455853 C1orf134Q5TEV5 83 aa7.44□□□□□ -1.22
LINC00473-202ENST00000455853 A0A1B0GU69 56 aa7.41□□□□□ -1.22
LINC00473-202ENST00000455853 A0A1B0GVY2 172 aa7.41□□□□□ -1.22
LINC00473-202ENST00000455853 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
LINC00473-202ENST00000455853 KRTAP16-1A8MUX0 517 aa7.35□□□□□ -1.23
LINC00473-202ENST00000455853 PKD1P98161 4303 aa7.34□□□□□ -1.23
LINC00473-202ENST00000455853 LCE2BO14633 110 aa7.34□□□□□ -1.24
LINC00473-202ENST00000455853 UQCR11O14957 56 aa7.34□□□□□ -1.24
LINC00473-202ENST00000455853 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
LINC00473-202ENST00000455853 PKHD1P08F94 4074 aa7.33□□□□□ -1.24
LINC00473-202ENST00000455853 HERC2O95714 4834 aa7.32□□□□□ -1.24
LINC00473-202ENST00000455853 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
LINC00473-202ENST00000455853 KRTAP13-2Q52LG2 175 aa7.32□□□□□ -1.24
LINC00473-202ENST00000455853 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
LINC00473-202ENST00000455853 DYNC1H1Q14204 4646 aaKnown RBP7.31□□□□□ -1.24
LINC00473-202ENST00000455853 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
LINC00473-202ENST00000455853 KIAA1109Q2LD37 5005 aa7.3□□□□□ -1.24
LINC00473-202ENST00000455853 IGKV2D-30A0A075B6S6 120 aa7.29□□□□□ -1.24
LINC00473-202ENST00000455853 RETNLBQ9BQ08 111 aa7.28□□□□□ -1.24
LINC00473-202ENST00000455853 Q6ZSA8 131 aa7.27□□□□□ -1.25
LINC00473-202ENST00000455853 C4orf48Q5BLP8 95 aa7.26□□□□□ -1.25
LINC00473-202ENST00000455853 KRTAP10-2P60368 255 aa7.24□□□□□ -1.25
LINC00473-202ENST00000455853 SPINK1P00995 79 aa7.24□□□□□ -1.25
LINC00473-202ENST00000455853 LRP1BQ9NZR2 4599 aa7.24□□□□□ -1.25
LINC00473-202ENST00000455853 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
LINC00473-202ENST00000455853 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
LINC00473-202ENST00000455853 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.26
LINC00473-202ENST00000455853 DNAH5Q8TE73 4624 aa7.2□□□□□ -1.26
LINC00473-202ENST00000455853 RYR1P21817 5038 aa7.2□□□□□ -1.26
LINC00473-202ENST00000455853 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
LINC00473-202ENST00000455853 TYMSOSQ8TAI1 123 aa7.17□□□□□ -1.26
LINC00473-202ENST00000455853 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
LINC00473-202ENST00000455853 HSPG2P98160 4391 aa7.17□□□□□ -1.26
LINC00473-202ENST00000455853 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
LINC00473-202ENST00000455853 KRTAP10-1P60331 282 aa7.15□□□□□ -1.26
LINC00473-202ENST00000455853 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.27
LINC00473-202ENST00000455853 PRAC1Q96KF2 57 aa7.13□□□□□ -1.27
LINC00473-202ENST00000455853 KRTAP9-6A0A140TA67 174 aa7.13□□□□□ -1.27
LINC00473-202ENST00000455853 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
LINC00473-202ENST00000455853 PCLOQ9Y6V0 5065 aa7.11□□□□□ -1.27
LINC00473-202ENST00000455853 ABCA13Q86UQ4 5058 aa7.1□□□□□ -1.27
LINC00473-202ENST00000455853 Q8N1X5 172 aa7.08□□□□□ -1.28
LINC00473-202ENST00000455853 LINC00304Q8N9R0 145 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms