RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 DNAH12Q6ZR08 3092 aa0.91□□□□□ -2.26
LINC02540-201ENST00000455554 WDFY4Q6ZS81 3184 aa0.91□□□□□ -2.26
LINC02540-201ENST00000455554 MKI67P46013 3256 aaKnown RBP0.91□□□□□ -2.26
LINC02540-201ENST00000455554 C10orf99Q6UWK7 81 aa0.91□□□□□ -2.26
LINC02540-201ENST00000455554 DMBT1Q9UGM3 2413 aaPredicted RBP0.91□□□□□ -2.26
LINC02540-201ENST00000455554 ANKHD1Q8IWZ3 2542 aaKnown RBP0.91□□□□□ -2.26
LINC02540-201ENST00000455554 CCDC168Q8NDH2 2452 aa0.91□□□□□ -2.26
LINC02540-201ENST00000455554 SPTBN5Q9NRC6 3674 aaKnown RBP0.91□□□□□ -2.26
LINC02540-201ENST00000455554 TRIOO75962 3097 aa0.9□□□□□ -2.26
LINC02540-201ENST00000455554 NCOR2Q9Y618 2525 aa0.9□□□□□ -2.26
LINC02540-201ENST00000455554 CHD9Q3L8U1 2897 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 A0A096LNI7 61 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 UBE2DNLQ8IWF7 75 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 DEFB123Q8N688 67 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 S4R3F8 94 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 TLN1Q9Y490 2541 aaKnown RBP0.9□□□□□ -2.27
LINC02540-201ENST00000455554 AKAP13Q12802 2813 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 LAMA2P24043 3122 aaKnown RBP0.9□□□□□ -2.27
LINC02540-201ENST00000455554 USP34Q70CQ2 3546 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 PKD1L2Q7Z442 2459 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 SRRM2Q9UQ35 2752 aaKnown RBP0.9□□□□□ -2.27
LINC02540-201ENST00000455554 PRRC2CQ9Y520 2896 aaKnown RBP0.9□□□□□ -2.27
LINC02540-201ENST00000455554 C5orf42Q9H799 3197 aa0.9□□□□□ -2.27
LINC02540-201ENST00000455554 NF1P21359 2839 aa0.89□□□□□ -2.27
LINC02540-201ENST00000455554 DMDP11532 3685 aa0.89□□□□□ -2.27
LINC02540-201ENST00000455554 FREM2Q5SZK8 3169 aa0.89□□□□□ -2.27
LINC02540-201ENST00000455554 CRYBG3Q68DQ2 2970 aa0.89□□□□□ -2.27
LINC02540-201ENST00000455554 LRBAP50851 2863 aa0.89□□□□□ -2.27
LINC02540-201ENST00000455554 SETD2Q9BYW2 2564 aaPredicted RBP0.89□□□□□ -2.27
LINC02540-201ENST00000455554 TRANK1O15050 2925 aa0.89□□□□□ -2.27
LINC02540-201ENST00000455554 BAHCC1Q9P281 2608 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 DNAH14Q0VDD8 3507 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 ABCA12Q86UK0 2595 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 PTPN13Q12923 2485 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 APCP25054 2843 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 A0A0D9SG42 100 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 KRTAP13-4Q3LI77 160 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 APLNQ9ULZ1 77 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 UNC80Q8N2C7 3258 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 LAMA1P25391 3075 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 COL12A1Q99715 3063 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 TACC2O95359 2948 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 SPEGQ15772 3267 aa0.88□□□□□ -2.27
LINC02540-201ENST00000455554 BOD1L1Q8NFC6 3051 aa0.87□□□□□ -2.27
LINC02540-201ENST00000455554 TLN2Q9Y4G6 2542 aa0.87□□□□□ -2.27
LINC02540-201ENST00000455554 ZFYVE26Q68DK2 2539 aa0.87□□□□□ -2.27
LINC02540-201ENST00000455554 NBPF19A0A087WUL8 3843 aa0.87□□□□□ -2.27
LINC02540-201ENST00000455554 ZFHX4Q86UP3 3567 aa0.87□□□□□ -2.27
LINC02540-201ENST00000455554 USP9XQ93008 2570 aaPredicted RBP0.87□□□□□ -2.27
LINC02540-201ENST00000455554 AKAP9Q99996 3911 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 KRTAP12-1P59990 96 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 KRTAP6-3Q3LI67 103 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 LINC01556Q5JQF7 62 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 SPINK6Q6UWN8 80 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 DMXL1Q9Y485 3027 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 EP400Q96L91 3159 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 MTORP42345 2549 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 VWFP04275 2813 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 DOPEY1Q5JWR5 2465 aa0.86□□□□□ -2.27
LINC02540-201ENST00000455554 COL6A5A8TX70 2615 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 SPENQ96T58 3664 aaKnown RBP0.85□□□□□ -2.27
LINC02540-201ENST00000455554 ACANP16112 2415 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 H3BNG1 76 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 TEX15Q9BXT5 2789 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 HECTD1Q9ULT8 2610 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 CSMD1Q96PZ7 3565 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 LRRK2Q5S007 2527 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 CELSR3Q9NYQ7 3312 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 POLQO75417 2590 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 ATMQ13315 3056 aa0.85□□□□□ -2.27
LINC02540-201ENST00000455554 EPG5Q9HCE0 2579 aa0.84□□□□□ -2.27
LINC02540-201ENST00000455554 CHD8Q9HCK8 2581 aa0.84□□□□□ -2.27
LINC02540-201ENST00000455554 DCHS1Q96JQ0 3298 aa0.84□□□□□ -2.27
LINC02540-201ENST00000455554 HELZ2Q9BYK8 2649 aaKnown RBP0.84□□□□□ -2.27
LINC02540-201ENST00000455554 SPART-AS1P0CW21 52 aa0.84□□□□□ -2.27
LINC02540-201ENST00000455554 HTN3P15516 51 aa0.84□□□□□ -2.27
LINC02540-201ENST00000455554 DEFB124Q8NES8 71 aa0.84□□□□□ -2.27
LINC02540-201ENST00000455554 LAMA5O15230 3695 aa0.84□□□□□ -2.28
LINC02540-201ENST00000455554 DMXL2Q8TDJ6 3036 aa0.84□□□□□ -2.28
LINC02540-201ENST00000455554 BDP1A6H8Y1 2624 aa0.84□□□□□ -2.28
LINC02540-201ENST00000455554 MEGF8Q7Z7M0 2845 aa0.83□□□□□ -2.28
LINC02540-201ENST00000455554 CELSR1Q9NYQ6 3014 aa0.83□□□□□ -2.28
LINC02540-201ENST00000455554 UTP20O75691 2785 aaKnown RBP0.83□□□□□ -2.28
LINC02540-201ENST00000455554 VCANP13611 3396 aa0.83□□□□□ -2.28
LINC02540-201ENST00000455554 DEFB4AO15263 64 aa0.83□□□□□ -2.28
LINC02540-201ENST00000455554 WDFY3Q8IZQ1 3526 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 CFAP46Q8IYW2 2715 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 SMG1Q96Q15 3661 aaKnown RBP0.82□□□□□ -2.28
LINC02540-201ENST00000455554 UNC79Q9P2D8 2635 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 LAMA3Q16787 3333 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 CDH23Q9H251 3354 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 CENPEQ02224 2701 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 ASPMQ8IZT6 3477 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 MYO9AB2RTY4 2548 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 NBEAL2Q6ZNJ1 2754 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 DCHS2Q6V1P9 2916 aa0.82□□□□□ -2.28
LINC02540-201ENST00000455554 SETXQ7Z333 2677 aaKnown RBP0.82□□□□□ -2.28
LINC02540-201ENST00000455554 TENM1Q9UKZ4 2725 aa0.81□□□□□ -2.28
LINC02540-201ENST00000455554 CACNA1AO00555 2505 aa0.81□□□□□ -2.28
LINC02540-201ENST00000455554 USP9YO00507 2555 aaPredicted RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms