RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 PMAIP1Q13794 54 aa7.26□□□□□ -1.25
SEMA4D-213ENST00000455551 NOTCH2NLQ7Z3S9 236 aa7.26□□□□□ -1.25
SEMA4D-213ENST00000455551 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
SEMA4D-213ENST00000455551 CHKB-CPT1BH3BT56 60 aa7.26□□□□□ -1.25
SEMA4D-213ENST00000455551 KRTAP10-2P60368 255 aa7.26□□□□□ -1.25
SEMA4D-213ENST00000455551 A8MUN3 132 aa7.25□□□□□ -1.25
SEMA4D-213ENST00000455551 H3BPC8 53 aa7.25□□□□□ -1.25
SEMA4D-213ENST00000455551 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
SEMA4D-213ENST00000455551 DNAH11Q96DT5 4516 aa7.23□□□□□ -1.25
SEMA4D-213ENST00000455551 ASB16-AS1Q495Z4 193 aa7.23□□□□□ -1.25
SEMA4D-213ENST00000455551 DNAH5Q8TE73 4624 aa7.22□□□□□ -1.25
SEMA4D-213ENST00000455551 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.26
SEMA4D-213ENST00000455551 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
SEMA4D-213ENST00000455551 TP53AIP1Q9HCN2 124 aa7.2□□□□□ -1.26
SEMA4D-213ENST00000455551 ALMS1Q8TCU4 4167 aa7.2□□□□□ -1.26
SEMA4D-213ENST00000455551 PRR15LQ9BU68 103 aa7.19□□□□□ -1.26
SEMA4D-213ENST00000455551 A6NED7 52 aa7.18□□□□□ -1.26
SEMA4D-213ENST00000455551 Q1T7F1 81 aa7.18□□□□□ -1.26
SEMA4D-213ENST00000455551 CD164Q04900 197 aa7.18□□□□□ -1.26
SEMA4D-213ENST00000455551 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
SEMA4D-213ENST00000455551 KRTAP10-1P60331 282 aa7.15□□□□□ -1.26
SEMA4D-213ENST00000455551 HYDINQ4G0P3 5121 aa7.15□□□□□ -1.26
SEMA4D-213ENST00000455551 IGLV7-46A0A075B6I9 117 aa7.14□□□□□ -1.27
SEMA4D-213ENST00000455551 COA5Q86WW8 74 aa7.13□□□□□ -1.27
SEMA4D-213ENST00000455551 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
SEMA4D-213ENST00000455551 SSBP3-AS1Q7Z2R9 100 aa7.12□□□□□ -1.27
SEMA4D-213ENST00000455551 FLG2Q5D862 2391 aaPredicted RBP7.12□□□□□ -1.27
SEMA4D-213ENST00000455551 Q5W150 140 aa7.12□□□□□ -1.27
SEMA4D-213ENST00000455551 SPAG11AQ6PDA7 123 aa7.12□□□□□ -1.27
SEMA4D-213ENST00000455551 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
SEMA4D-213ENST00000455551 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.28
SEMA4D-213ENST00000455551 PKD1P98161 4303 aa7.09□□□□□ -1.28
SEMA4D-213ENST00000455551 Q6ZSA8 131 aa7.08□□□□□ -1.28
SEMA4D-213ENST00000455551 FAT2Q9NYQ8 4349 aa7.07□□□□□ -1.28
SEMA4D-213ENST00000455551 Q5VV11 94 aa7.05□□□□□ -1.28
SEMA4D-213ENST00000455551 LINC00313P59037 77 aa7.04□□□□□ -1.28
SEMA4D-213ENST00000455551 VPS13BQ7Z7G8 4022 aa7.04□□□□□ -1.28
SEMA4D-213ENST00000455551 LOC101927531A0A1B0GV80 90 aa7.03□□□□□ -1.28
SEMA4D-213ENST00000455551 C8orf87E5RJ46 101 aa7.03□□□□□ -1.28
SEMA4D-213ENST00000455551 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
SEMA4D-213ENST00000455551 HRES1P13985 223 aa7.03□□□□□ -1.28
SEMA4D-213ENST00000455551 LIMD2Q9BT23 127 aa7.02□□□□□ -1.29
SEMA4D-213ENST00000455551 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
SEMA4D-213ENST00000455551 PLA2G1BP04054 148 aaKnown RBP6.98□□□□□ -1.29
SEMA4D-213ENST00000455551 PKHD1P08F94 4074 aa6.97□□□□□ -1.29
SEMA4D-213ENST00000455551 PRR26Q8N8Z3 221 aa6.95□□□□□ -1.3
SEMA4D-213ENST00000455551 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
SEMA4D-213ENST00000455551 FAM229AH3BQW9 127 aa6.95□□□□□ -1.3
SEMA4D-213ENST00000455551 C4orf48Q5BLP8 95 aa6.95□□□□□ -1.3
SEMA4D-213ENST00000455551 PRAC1Q96KF2 57 aa6.93□□□□□ -1.3
SEMA4D-213ENST00000455551 KRTAP16-1A8MUX0 517 aa6.93□□□□□ -1.3
SEMA4D-213ENST00000455551 SPINK1P00995 79 aa6.92□□□□□ -1.3
SEMA4D-213ENST00000455551 SMR3BP02814 79 aaPredicted RBP6.92□□□□□ -1.3
SEMA4D-213ENST00000455551 Q75L30 129 aa6.92□□□□□ -1.3
SEMA4D-213ENST00000455551 LINC01558Q9Y6Z2 57 aa6.91□□□□□ -1.3
SEMA4D-213ENST00000455551 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.3
SEMA4D-213ENST00000455551 IGKV2-30P06310 120 aa6.9□□□□□ -1.3
SEMA4D-213ENST00000455551 SACSQ9NZJ4 4579 aa6.89□□□□□ -1.31
SEMA4D-213ENST00000455551 ACYP2P14621 99 aa6.89□□□□□ -1.31
SEMA4D-213ENST00000455551 LCA10Q71F78 164 aa6.88□□□□□ -1.31
SEMA4D-213ENST00000455551 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
SEMA4D-213ENST00000455551 DYNC1H1Q14204 4646 aaKnown RBP6.85□□□□□ -1.31
SEMA4D-213ENST00000455551 LINC00304Q8N9R0 145 aa6.85□□□□□ -1.31
SEMA4D-213ENST00000455551 RBM12B-AS1Q9P1G2 102 aa6.84□□□□□ -1.31
SEMA4D-213ENST00000455551 SPINK7P58062 85 aa6.84□□□□□ -1.31
SEMA4D-213ENST00000455551 FAT1Q14517 4588 aa6.83□□□□□ -1.32
SEMA4D-213ENST00000455551 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
SEMA4D-213ENST00000455551 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
SEMA4D-213ENST00000455551 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
SEMA4D-213ENST00000455551 C9orf92A6NGG3 77 aa6.77□□□□□ -1.33
SEMA4D-213ENST00000455551 KRTAP21-3Q3LHN1 58 aa6.77□□□□□ -1.33
SEMA4D-213ENST00000455551 ATP11AUNQ6ZP68 121 aa6.74□□□□□ -1.33
SEMA4D-213ENST00000455551 Q8N1X5 172 aa6.74□□□□□ -1.33
SEMA4D-213ENST00000455551 APOBP04114 4563 aaKnown RBP6.74□□□□□ -1.33
SEMA4D-213ENST00000455551 A0A1B0GVY2 172 aa6.73□□□□□ -1.33
SEMA4D-213ENST00000455551 KTN1-AS1Q86SY8 53 aa6.73□□□□□ -1.33
SEMA4D-213ENST00000455551 A0A1B0GU69 56 aa6.72□□□□□ -1.33
SEMA4D-213ENST00000455551 CRIPTQ9P021 101 aa6.72□□□□□ -1.33
SEMA4D-213ENST00000455551 RPS29P62273 56 aaKnown RBP6.71□□□□□ -1.34
SEMA4D-213ENST00000455551 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
SEMA4D-213ENST00000455551 RYR2Q92736 4967 aa6.68□□□□□ -1.34
SEMA4D-213ENST00000455551 A6NN06 94 aa6.66□□□□□ -1.34
SEMA4D-213ENST00000455551 KMT2CQ8NEZ4 4911 aaKnown RBP6.66□□□□□ -1.34
SEMA4D-213ENST00000455551 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.34
SEMA4D-213ENST00000455551 A8MUU9 505 aa6.62□□□□□ -1.35
SEMA4D-213ENST00000455551 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
SEMA4D-213ENST00000455551 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
SEMA4D-213ENST00000455551 H3BS24 57 aa6.57□□□□□ -1.36
SEMA4D-213ENST00000455551 UQCR11O14957 56 aa6.57□□□□□ -1.36
SEMA4D-213ENST00000455551 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
SEMA4D-213ENST00000455551 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
SEMA4D-213ENST00000455551 KRTAP3-1Q9BYR8 98 aa6.54□□□□□ -1.36
SEMA4D-213ENST00000455551 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
SEMA4D-213ENST00000455551 Q5VSD8 79 aa6.49□□□□□ -1.37
SEMA4D-213ENST00000455551 FAT3Q8TDW7 4589 aa6.48□□□□□ -1.37
SEMA4D-213ENST00000455551 TNXBP22105 4242 aa6.47□□□□□ -1.37
SEMA4D-213ENST00000455551 HSPG2P98160 4391 aa6.47□□□□□ -1.37
SEMA4D-213ENST00000455551 MYCBP2O75592 4640 aa6.45□□□□□ -1.38
SEMA4D-213ENST00000455551 KRTAP10-8P60410 259 aa6.43□□□□□ -1.38
SEMA4D-213ENST00000455551 RYR3Q15413 4870 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms