RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 KRTAP10-4P60372 401 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-210ENST00000454859 Q96NJ1 140 aa4□□□□□ -1.77
ECHDC1-210ENST00000454859 A0A087WVE0 104 aa4□□□□□ -1.77
ECHDC1-210ENST00000454859 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
ECHDC1-210ENST00000454859 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
ECHDC1-210ENST00000454859 A0A087X002 238 aa3.99□□□□□ -1.77
ECHDC1-210ENST00000454859 K7EQZ3 153 aa3.99□□□□□ -1.77
ECHDC1-210ENST00000454859 A0A1B0GVX0 72 aa3.98□□□□□ -1.77
ECHDC1-210ENST00000454859 H3BPC8 53 aa3.98□□□□□ -1.77
ECHDC1-210ENST00000454859 NDUFC1O43677 76 aa3.98□□□□□ -1.77
ECHDC1-210ENST00000454859 TP53AIP1Q9HCN2 124 aa3.98□□□□□ -1.77
ECHDC1-210ENST00000454859 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-210ENST00000454859 OCR1Q9BZK8 76 aa3.98□□□□□ -1.77
ECHDC1-210ENST00000454859 ANAPC11Q9NYG5 84 aa3.98□□□□□ -1.77
ECHDC1-210ENST00000454859 A0A0G2JQZ4 141 aa3.97□□□□□ -1.77
ECHDC1-210ENST00000454859 C5orf47Q569G3 176 aa3.97□□□□□ -1.77
ECHDC1-210ENST00000454859 LINC00304Q8N9R0 145 aa3.96□□□□□ -1.77
ECHDC1-210ENST00000454859 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.77
ECHDC1-210ENST00000454859 CASC2Q6XLA1 102 aa3.96□□□□□ -1.78
ECHDC1-210ENST00000454859 DYNC1H1Q14204 4646 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-210ENST00000454859 KLKP1Q107X0 134 aa3.95□□□□□ -1.78
ECHDC1-210ENST00000454859 SRRM2Q9UQ35 2752 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-210ENST00000454859 Q8N9L7 120 aa3.95□□□□□ -1.78
ECHDC1-210ENST00000454859 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
ECHDC1-210ENST00000454859 LRP1BQ9NZR2 4599 aa3.94□□□□□ -1.78
ECHDC1-210ENST00000454859 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
ECHDC1-210ENST00000454859 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
ECHDC1-210ENST00000454859 SMR3BP02814 79 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-210ENST00000454859 KRTAP4-5Q9BYR2 181 aa3.94□□□□□ -1.78
ECHDC1-210ENST00000454859 C1orf195Q5TG92 126 aa3.94□□□□□ -1.78
ECHDC1-210ENST00000454859 HRCT1Q6UXD1 115 aa3.94□□□□□ -1.78
ECHDC1-210ENST00000454859 Q8N1X5 172 aa3.93□□□□□ -1.78
ECHDC1-210ENST00000454859 Q5VSD8 79 aa3.93□□□□□ -1.78
ECHDC1-210ENST00000454859 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
ECHDC1-210ENST00000454859 PKHD1P08F94 4074 aa3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 CCDC179H3BU77 68 aa3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 MP68P56378 58 aa3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 TMEM258P61165 79 aa3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 DEFB116Q30KQ4 102 aa3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 PRR26Q8N8Z3 221 aa3.92□□□□□ -1.78
ECHDC1-210ENST00000454859 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
ECHDC1-210ENST00000454859 LINC00313P59037 77 aa3.91□□□□□ -1.78
ECHDC1-210ENST00000454859 KRTAP10-8P60410 259 aa3.9□□□□□ -1.78
ECHDC1-210ENST00000454859 APOBP04114 4563 aaKnown RBP3.9□□□□□ -1.78
ECHDC1-210ENST00000454859 IGHV6-1A0A0B4J1U7 121 aa3.9□□□□□ -1.79
ECHDC1-210ENST00000454859 OXTP01178 125 aa3.9□□□□□ -1.79
ECHDC1-210ENST00000454859 A0A0U1RQV1 116 aa3.89□□□□□ -1.79
ECHDC1-210ENST00000454859 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-210ENST00000454859 WFDC13Q8IUB5 93 aa3.89□□□□□ -1.79
ECHDC1-210ENST00000454859 KIAA1109Q2LD37 5005 aa3.89□□□□□ -1.79
ECHDC1-210ENST00000454859 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
ECHDC1-210ENST00000454859 Q8N9P0 234 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-210ENST00000454859 TRAV22A0A0B4J277 110 aa3.88□□□□□ -1.79
ECHDC1-210ENST00000454859 ZCCHC13Q8WW36 166 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-210ENST00000454859 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
ECHDC1-210ENST00000454859 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
ECHDC1-210ENST00000454859 H0Y9P7 68 aa3.85□□□□□ -1.79
ECHDC1-210ENST00000454859 H7BZZ5 65 aa3.85□□□□□ -1.79
ECHDC1-210ENST00000454859 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-210ENST00000454859 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
ECHDC1-210ENST00000454859 RYR1P21817 5038 aa3.84□□□□□ -1.79
ECHDC1-210ENST00000454859 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.79
ECHDC1-210ENST00000454859 HERC2O95714 4834 aa3.84□□□□□ -1.79
ECHDC1-210ENST00000454859 NDUFS5O43920 106 aa3.82□□□□□ -1.8
ECHDC1-210ENST00000454859 C1orf64Q8NEQ6 169 aa3.82□□□□□ -1.8
ECHDC1-210ENST00000454859 FAM236DA0A1B0GTK5 79 aa3.81□□□□□ -1.8
ECHDC1-210ENST00000454859 FAM236CP0DP71 79 aa3.81□□□□□ -1.8
ECHDC1-210ENST00000454859 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
ECHDC1-210ENST00000454859 C20orf166-AS1Q96NR2 134 aa3.81□□□□□ -1.8
ECHDC1-210ENST00000454859 NOTCH2NLQ7Z3S9 236 aa3.81□□□□□ -1.8
ECHDC1-210ENST00000454859 LINC00208Q96KT6 92 aa3.81□□□□□ -1.8
ECHDC1-210ENST00000454859 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
ECHDC1-210ENST00000454859 A8MUU9 505 aa3.8□□□□□ -1.8
ECHDC1-210ENST00000454859 CYP4F30PQ9H0H9 118 aa3.8□□□□□ -1.8
ECHDC1-210ENST00000454859 SNURFQ9Y675 71 aa3.8□□□□□ -1.8
ECHDC1-210ENST00000454859 HSPG2P98160 4391 aa3.8□□□□□ -1.8
ECHDC1-210ENST00000454859 FLG2Q5D862 2391 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-210ENST00000454859 MT1HL1P0DM35 61 aa3.78□□□□□ -1.8
ECHDC1-210ENST00000454859 Q75L30 129 aa3.78□□□□□ -1.8
ECHDC1-210ENST00000454859 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
ECHDC1-210ENST00000454859 CYSTM1Q9H1C7 97 aa3.77□□□□□ -1.81
ECHDC1-210ENST00000454859 IGLV7-46A0A075B6I9 117 aa3.77□□□□□ -1.81
ECHDC1-210ENST00000454859 FAT1Q14517 4588 aa3.76□□□□□ -1.81
ECHDC1-210ENST00000454859 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
ECHDC1-210ENST00000454859 H3BS24 57 aa3.76□□□□□ -1.81
ECHDC1-210ENST00000454859 Q5W150 140 aa3.75□□□□□ -1.81
ECHDC1-210ENST00000454859 TPRXLQ17RH7 258 aa3.73□□□□□ -1.81
ECHDC1-210ENST00000454859 C7orf65Q6ZTY9 151 aa3.73□□□□□ -1.81
ECHDC1-210ENST00000454859 A8MUN3 132 aa3.71□□□□□ -1.82
ECHDC1-210ENST00000454859 TNXBP22105 4242 aa3.71□□□□□ -1.82
ECHDC1-210ENST00000454859 RPL37P61927 97 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-210ENST00000454859 SMIM26A0A096LP01 95 aa3.7□□□□□ -1.82
ECHDC1-210ENST00000454859 ATP11AUNQ6ZP68 121 aa3.69□□□□□ -1.82
ECHDC1-210ENST00000454859 FAT3Q8TDW7 4589 aa3.69□□□□□ -1.82
ECHDC1-210ENST00000454859 ACYP2P14621 99 aa3.69□□□□□ -1.82
ECHDC1-210ENST00000454859 RETNLBQ9BQ08 111 aa3.69□□□□□ -1.82
ECHDC1-210ENST00000454859 C9orf92A6NGG3 77 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 272.8 ms