RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 C8orf87E5RJ46 101 aa9.14□□□□□ -0.95
UBE2D4-208ENST00000454350 LCE2BO14633 110 aa9.14□□□□□ -0.95
UBE2D4-208ENST00000454350 RBM3P98179 157 aaKnown RBP9.14□□□□□ -0.95
UBE2D4-208ENST00000454350 VPS25Q9BRG1 176 aa9.13□□□□□ -0.95
UBE2D4-208ENST00000454350 KRTAP9-3Q9BYQ3 159 aa9.13□□□□□ -0.95
UBE2D4-208ENST00000454350 DSCR8Q96T75 97 aa9.1□□□□□ -0.95
UBE2D4-208ENST00000454350 BAALC-AS2P0C853 105 aa9.08□□□□□ -0.96
UBE2D4-208ENST00000454350 SCGB1C2P0DMR2 95 aa9.08□□□□□ -0.96
UBE2D4-208ENST00000454350 Q6ZQT0 140 aa9.08□□□□□ -0.96
UBE2D4-208ENST00000454350 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
UBE2D4-208ENST00000454350 KRTAP9-7A8MTY7 169 aa9.06□□□□□ -0.96
UBE2D4-208ENST00000454350 J3KT08 172 aa9.06□□□□□ -0.96
UBE2D4-208ENST00000454350 FCGBPQ9Y6R7 5405 aaPredicted RBP9.05□□□□□ -0.96
UBE2D4-208ENST00000454350 C9JAW5 83 aa9.05□□□□□ -0.96
UBE2D4-208ENST00000454350 KRTAP10-10P60014 251 aa9.05□□□□□ -0.96
UBE2D4-208ENST00000454350 Q8N9P0 234 aaPredicted RBP9.05□□□□□ -0.96
UBE2D4-208ENST00000454350 SPINK7P58062 85 aa9.04□□□□□ -0.96
UBE2D4-208ENST00000454350 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.97
UBE2D4-208ENST00000454350 C21orf62-AS1Q17RA5 79 aa9.01□□□□□ -0.97
UBE2D4-208ENST00000454350 TMA7Q9Y2S6 64 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-208ENST00000454350 LOC110117498A0A087WWA1 95 aa8.97□□□□□ -0.97
UBE2D4-208ENST00000454350 MTURNQ8N3F0 131 aa8.97□□□□□ -0.97
UBE2D4-208ENST00000454350 C8orf17Q9NRJ1 99 aa8.97□□□□□ -0.97
UBE2D4-208ENST00000454350 IGKV3D-7A0A0C4DH55 119 aa8.96□□□□□ -0.98
UBE2D4-208ENST00000454350 A8MWP4 228 aa8.96□□□□□ -0.98
UBE2D4-208ENST00000454350 NAA38Q9BRA0 125 aaKnown RBP8.96□□□□□ -0.98
UBE2D4-208ENST00000454350 NDUFB1O75438 58 aa8.95□□□□□ -0.98
UBE2D4-208ENST00000454350 A0A1B0GW54 56 aa8.94□□□□□ -0.98
UBE2D4-208ENST00000454350 JMJD7-PLA2G4BH0Y9G9 81 aa8.94□□□□□ -0.98
UBE2D4-208ENST00000454350 ATXN8Q156A1 80 aa8.93□□□□□ -0.98
UBE2D4-208ENST00000454350 WFDC13Q8IUB5 93 aa8.91□□□□□ -0.98
UBE2D4-208ENST00000454350 M0R143 59 aa8.88□□□□□ -0.99
UBE2D4-208ENST00000454350 PDE6GP18545 87 aa8.88□□□□□ -0.99
UBE2D4-208ENST00000454350 Q6ZVQ6 151 aa8.88□□□□□ -0.99
UBE2D4-208ENST00000454350 PRR15Q8IV56 129 aa8.88□□□□□ -0.99
UBE2D4-208ENST00000454350 C14orf132Q9NPU4 83 aa8.88□□□□□ -0.99
UBE2D4-208ENST00000454350 MMP24-AS1A0A0U1RRL7 71 aa8.84□□□□□ -0.99
UBE2D4-208ENST00000454350 LYRM7Q5U5X0 104 aa8.83□□□□□ -1
UBE2D4-208ENST00000454350 KRTAP19-6Q3LI70 58 aa8.82□□□□□ -1
UBE2D4-208ENST00000454350 NREPQ16612 68 aa8.8□□□□□ -1
UBE2D4-208ENST00000454350 TMEM254Q8TBM7 123 aa8.8□□□□□ -1
UBE2D4-208ENST00000454350 MRPL34Q9BQ48 92 aaKnown RBP8.8□□□□□ -1
UBE2D4-208ENST00000454350 MACF1Q9UPN3 7388 aaKnown RBP8.75□□□□□ -1.01
UBE2D4-208ENST00000454350 K7EQZ3 153 aa8.75□□□□□ -1.01
UBE2D4-208ENST00000454350 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
UBE2D4-208ENST00000454350 H1FX-AS1Q4G0G2 97 aa8.73□□□□□ -1.01
UBE2D4-208ENST00000454350 SMIM6P0DI80 62 aa8.72□□□□□ -1.01
UBE2D4-208ENST00000454350 Q5W150 140 aa8.71□□□□□ -1.02
UBE2D4-208ENST00000454350 SYNE2Q8WXH0 6885 aaKnown RBP8.67□□□□□ -1.02
UBE2D4-208ENST00000454350 H3BT86 120 aa8.67□□□□□ -1.02
UBE2D4-208ENST00000454350 NDUFS5O43920 106 aa8.66□□□□□ -1.02
UBE2D4-208ENST00000454350 BATFQ16520 125 aa8.66□□□□□ -1.02
UBE2D4-208ENST00000454350 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
UBE2D4-208ENST00000454350 C9orf118A6NHY6 69 aa8.65□□□□□ -1.02
UBE2D4-208ENST00000454350 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
UBE2D4-208ENST00000454350 BPY2O14599 106 aa8.63□□□□□ -1.03
UBE2D4-208ENST00000454350 TAX1BP3O14907 124 aa8.63□□□□□ -1.03
UBE2D4-208ENST00000454350 IGKV2-30P06310 120 aa8.63□□□□□ -1.03
UBE2D4-208ENST00000454350 A0A1W2PPM0 123 aa8.61□□□□□ -1.03
UBE2D4-208ENST00000454350 C7orf65Q6ZTY9 151 aa8.61□□□□□ -1.03
UBE2D4-208ENST00000454350 TSTD3H0UI37 97 aa8.6□□□□□ -1.03
UBE2D4-208ENST00000454350 Q8N9L7 120 aa8.6□□□□□ -1.03
UBE2D4-208ENST00000454350 CASC2Q6XLA1 102 aa8.55□□□□□ -1.04
UBE2D4-208ENST00000454350 HCG22E2RYF7 251 aa8.54□□□□□ -1.04
UBE2D4-208ENST00000454350 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
UBE2D4-208ENST00000454350 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
UBE2D4-208ENST00000454350 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
UBE2D4-208ENST00000454350 CXCL6P80162 114 aa8.48□□□□□ -1.05
UBE2D4-208ENST00000454350 KRTAP6-3Q3LI67 103 aa8.48□□□□□ -1.05
UBE2D4-208ENST00000454350 LOC105371267A0A1B0GV96 52 aa8.47□□□□□ -1.05
UBE2D4-208ENST00000454350 SPCS1Q9Y6A9 102 aa8.45□□□□□ -1.06
UBE2D4-208ENST00000454350 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
UBE2D4-208ENST00000454350 PRO0461Q9UI25 63 aa8.42□□□□□ -1.06
UBE2D4-208ENST00000454350 MT1BP07438 61 aa8.4□□□□□ -1.06
UBE2D4-208ENST00000454350 UBL5Q9BZL1 73 aa8.36□□□□□ -1.07
UBE2D4-208ENST00000454350 SPRR2GQ9BYE4 73 aa8.35□□□□□ -1.07
UBE2D4-208ENST00000454350 S4R3F8 94 aa8.35□□□□□ -1.07
UBE2D4-208ENST00000454350 KRTAP19-8Q3LI54 63 aa8.34□□□□□ -1.07
UBE2D4-208ENST00000454350 LCA10Q71F78 164 aa8.34□□□□□ -1.07
UBE2D4-208ENST00000454350 C1orf64Q8NEQ6 169 aa8.34□□□□□ -1.07
UBE2D4-208ENST00000454350 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
UBE2D4-208ENST00000454350 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
UBE2D4-208ENST00000454350 CSAG1Q6PB30 78 aa8.31□□□□□ -1.08
UBE2D4-208ENST00000454350 K7EP34 96 aa8.29□□□□□ -1.08
UBE2D4-208ENST00000454350 A6NN06 94 aa8.27□□□□□ -1.09
UBE2D4-208ENST00000454350 COL5A1-AS1Q5SY13 56 aa8.27□□□□□ -1.09
UBE2D4-208ENST00000454350 Q5VV11 94 aa8.27□□□□□ -1.09
UBE2D4-208ENST00000454350 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
UBE2D4-208ENST00000454350 TP53AIP1Q9HCN2 124 aa8.25□□□□□ -1.09
UBE2D4-208ENST00000454350 KRTAP10-5P60370 271 aa8.21□□□□□ -1.1
UBE2D4-208ENST00000454350 KLKP1Q107X0 134 aa8.21□□□□□ -1.1
UBE2D4-208ENST00000454350 CYP4F30PQ9H0H9 118 aa8.18□□□□□ -1.1
UBE2D4-208ENST00000454350 NEBP20929 6669 aa8.18□□□□□ -1.1
UBE2D4-208ENST00000454350 A0A087WVE0 104 aa8.17□□□□□ -1.1
UBE2D4-208ENST00000454350 MUC12Q9UKN1 5478 aa8.16□□□□□ -1.1
UBE2D4-208ENST00000454350 ETDBQ3ZM63 59 aa8.13□□□□□ -1.11
UBE2D4-208ENST00000454350 F8W1H4 67 aa8.11□□□□□ -1.11
UBE2D4-208ENST00000454350 GTF2H5Q6ZYL4 71 aa8.1□□□□□ -1.11
UBE2D4-208ENST00000454350 TRAV22A0A0B4J277 110 aa8.06□□□□□ -1.12
UBE2D4-208ENST00000454350 KRTAP5-9P26371 169 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms